RNA–Protein interactions for RNA: ENST00000424867.1

PBRM1-212, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-212ENST00000424867 SCNN1DP51172 638 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 SMTNP53814 917 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 GDF10P55107 478 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 OXLD1Q5BKU9 147 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 PHTF2Q8N3S3 785 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 SIRT1Q96EB6 747 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 ZIC5Q96T25 663 aa9.92□□□□□ -0.82
PBRM1-212ENST00000424867 ZEB1P37275 1124 aaPredicted RBP9.91□□□□□ -0.82
PBRM1-212ENST00000424867 TRIM28Q13263 835 aaKnown RBP9.91□□□□□ -0.82
PBRM1-212ENST00000424867 MTMR14Q8NCE2 650 aa9.91□□□□□ -0.82
PBRM1-212ENST00000424867 SLFNL1Q499Z3 407 aa9.9□□□□□ -0.82
PBRM1-212ENST00000424867 SYT9Q86SS6 491 aa9.9□□□□□ -0.82
PBRM1-212ENST00000424867 BANK1Q8NDB2 785 aa9.9□□□□□ -0.82
PBRM1-212ENST00000424867 NACC1Q96RE7 527 aa9.9□□□□□ -0.82
PBRM1-212ENST00000424867 TARBP1Q13395 1621 aaKnown RBP9.89□□□□□ -0.83
PBRM1-212ENST00000424867 ZNF608Q9ULD9 1512 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-212ENST00000424867 LAMC2Q13753 1193 aa9.89□□□□□ -0.83
PBRM1-212ENST00000424867 POLA1P09884 1462 aaPredicted RBP9.89□□□□□ -0.83
PBRM1-212ENST00000424867 BTBD11A6QL63 1104 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 M0R082 166 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 SOCS7O14512 581 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 GRIK4Q16099 956 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 ZNF417Q8TAU3 575 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 ZNF587Q96SQ5 575 aaPredicted RBP9.88□□□□□ -0.83
PBRM1-212ENST00000424867 ZDHHC3Q9NYG2 299 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 SERTAD1Q9UHV2 236 aa9.88□□□□□ -0.83
PBRM1-212ENST00000424867 EFSO43281 561 aa9.87□□□□□ -0.83
PBRM1-212ENST00000424867 COL9A3Q14050 684 aaPredicted RBP9.87□□□□□ -0.83
PBRM1-212ENST00000424867 BICDL1Q6ZP65 573 aa9.87□□□□□ -0.83
PBRM1-212ENST00000424867 ZNF295-AS1Q8N0V1 137 aa9.87□□□□□ -0.83
PBRM1-212ENST00000424867 MDFIQ99750 246 aa9.87□□□□□ -0.83
PBRM1-212ENST00000424867 MAGI1Q96QZ7 1491 aaPredicted RBP9.86□□□□□ -0.83
PBRM1-212ENST00000424867 APBB1O00213 710 aa9.86□□□□□ -0.83
PBRM1-212ENST00000424867 CDK2AP1O14519 115 aa9.86□□□□□ -0.83
PBRM1-212ENST00000424867 EIF4G2P78344 907 aaKnown RBP eCLIP9.86□□□□□ -0.83
PBRM1-212ENST00000424867 KRTAP9-9Q9BYP9 154 aa9.86□□□□□ -0.83
PBRM1-212ENST00000424867 KRTAP9-4Q9BYQ2 154 aa9.86□□□□□ -0.83
PBRM1-212ENST00000424867 CABP1Q9NZU7 370 aa9.86□□□□□ -0.83
PBRM1-212ENST00000424867 ARHGEF11O15085 1522 aa9.86□□□□□ -0.83
PBRM1-212ENST00000424867 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 SIN3BO75182 1162 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 LRP8Q14114 963 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 PRDM6Q9NQX0 595 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 SNRKQ9NRH2 765 aa9.85□□□□□ -0.83
PBRM1-212ENST00000424867 SOGA1O94964 1423 aa9.84□□□□□ -0.83
PBRM1-212ENST00000424867 ADARB2-AS1A8MUL3 147 aa9.84□□□□□ -0.83
PBRM1-212ENST00000424867 C8orf86Q6ZUL3 223 aa9.84□□□□□ -0.83
PBRM1-212ENST00000424867 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
PBRM1-212ENST00000424867 STARD13Q9Y3M8 1113 aa9.84□□□□□ -0.83
PBRM1-212ENST00000424867 A6NJY4 79 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 HYAL3O43820 417 aaPredicted RBP9.83□□□□□ -0.84
PBRM1-212ENST00000424867 SLC24A1O60721 1099 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 H2AFB1P0C5Y9 115 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 H2AFB2P0C5Z0 115 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 MICALL1Q8N3F8 863 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 IL27Q8NEV9 243 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 SLC4A9Q96Q91 983 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 CHIC2Q9UKJ5 165 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 PARP3Q9Y6F1 533 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 USP3Q9Y6I4 520 aa9.83□□□□□ -0.84
PBRM1-212ENST00000424867 ALBP02768 609 aa9.82□□□□□ -0.84
PBRM1-212ENST00000424867 GRIN2BQ13224 1484 aa9.82□□□□□ -0.84
PBRM1-212ENST00000424867 SYNJ1O43426 1573 aa9.82□□□□□ -0.84
PBRM1-212ENST00000424867 FGD5Q6ZNL6 1462 aa9.81□□□□□ -0.84
PBRM1-212ENST00000424867 C9orf172C9J069 976 aa9.81□□□□□ -0.84
PBRM1-212ENST00000424867 MTFR1Q15390 333 aa9.81□□□□□ -0.84
PBRM1-212ENST00000424867 KRTAP19-1Q8IUB9 90 aa9.81□□□□□ -0.84
PBRM1-212ENST00000424867 CHD1O14646 1710 aa9.81□□□□□ -0.84
PBRM1-212ENST00000424867 AQRO60306 1485 aaKnown RBP eCLIP9.8□□□□□ -0.846e-6■■■■□ 23.2
PBRM1-212ENST00000424867 TMEM229AB2RXF0 380 aa9.8□□□□□ -0.84
PBRM1-212ENST00000424867 NID1P14543 1247 aa9.8□□□□□ -0.84
PBRM1-212ENST00000424867 GOLGA2P5Q9HBQ8 144 aa9.8□□□□□ -0.84
PBRM1-212ENST00000424867 SYNJ2O15056 1496 aa9.79□□□□□ -0.84
PBRM1-212ENST00000424867 TXLNAP40222 546 aa9.79□□□□□ -0.84
PBRM1-212ENST00000424867 TRAPPC3LQ5T215 181 aa9.79□□□□□ -0.84
PBRM1-212ENST00000424867 LRRC69Q6ZNQ3 347 aa9.79□□□□□ -0.84
PBRM1-212ENST00000424867 TNFRSF25Q93038 417 aa9.79□□□□□ -0.84
PBRM1-212ENST00000424867 ADGRE1Q14246 886 aa9.78□□□□□ -0.84
PBRM1-212ENST00000424867 SLC30A3Q99726 388 aa9.78□□□□□ -0.84
PBRM1-212ENST00000424867 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
PBRM1-212ENST00000424867 CUX1P39880 1505 aa9.77□□□□□ -0.84
PBRM1-212ENST00000424867 SFSWAPQ12872 951 aaKnown RBP9.77□□□□□ -0.85
PBRM1-212ENST00000424867 MBTPS1Q14703 1052 aa9.77□□□□□ -0.85
PBRM1-212ENST00000424867 MAP7D1Q3KQU3 841 aa9.77□□□□□ -0.85
PBRM1-212ENST00000424867 NEUROD4Q9HD90 331 aa9.77□□□□□ -0.85
PBRM1-212ENST00000424867 TBC1D2BQ9UPU7 963 aa9.77□□□□□ -0.85
PBRM1-212ENST00000424867 SNAPC4Q5SXM2 1469 aa9.77□□□□□ -0.85
PBRM1-212ENST00000424867 ABCA10Q8WWZ4 1543 aa9.77□□□□□ -0.85
PBRM1-212ENST00000424867 SELPP16109 830 aa9.76□□□□□ -0.85
PBRM1-212ENST00000424867 ADH7P40394 386 aa9.76□□□□□ -0.85
PBRM1-212ENST00000424867 CHMP7Q8WUX9 453 aaPredicted RBP9.76□□□□□ -0.85
PBRM1-212ENST00000424867 CLASP1Q7Z460 1538 aa9.76□□□□□ -0.85
PBRM1-212ENST00000424867 RAD54L2Q9Y4B4 1467 aa9.75□□□□□ -0.85
PBRM1-212ENST00000424867 TXNRD3Q86VQ6 643 aa9.75□□□□□ -0.85
PBRM1-212ENST00000424867 PLPP7Q8NBV4 271 aa9.75□□□□□ -0.85
PBRM1-212ENST00000424867 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
PBRM1-212ENST00000424867 GAPVD1Q14C86 1478 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms