RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GNAI1P63096 354 aa14.24□□□□□ -0.13
USP49-204ENST00000423567 NBPF10Q6P3W6 841 aaKnown RBP14.24□□□□□ -0.13
USP49-204ENST00000423567 NBPF15Q8N660 670 aa14.24□□□□□ -0.13
USP49-204ENST00000423567 NPHP1O15259 732 aa14.23□□□□□ -0.13
USP49-204ENST00000423567 SERPINB2P05120 415 aa14.23□□□□□ -0.13
USP49-204ENST00000423567 CLEC4GQ6UXB4 293 aa14.23□□□□□ -0.13
USP49-204ENST00000423567 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
USP49-204ENST00000423567 SETDB2Q96T68 719 aa14.23□□□□□ -0.13
USP49-204ENST00000423567 IFT57Q9NWB7 429 aa14.23□□□□□ -0.13
USP49-204ENST00000423567 MYL6BP14649 208 aa14.22□□□□□ -0.13
USP49-204ENST00000423567 TBC1D9BQ66K14 1250 aa14.22□□□□□ -0.13
USP49-204ENST00000423567 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
USP49-204ENST00000423567 NGEFQ8N5V2 710 aa14.22□□□□□ -0.13
USP49-204ENST00000423567 CARMIL3Q8ND23 1372 aa14.22□□□□□ -0.13
USP49-204ENST00000423567 RGL2O15211 777 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 HOXB7P09629 217 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 YY1P25490 414 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 PIP4P2Q8N4L2 257 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 MBIPQ9NS73 344 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 LAMB4A4D0S4 1761 aa14.21□□□□□ -0.13
USP49-204ENST00000423567 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
USP49-204ENST00000423567 DPEP1P16444 411 aa14.2□□□□□ -0.14
USP49-204ENST00000423567 YBX3P16989 372 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP49-204ENST00000423567 WWC3Q9ULE0 1092 aa14.2□□□□□ -0.14
USP49-204ENST00000423567 PXDNLA1KZ92 1463 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 ERVV-1B6SEH8 477 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 ZNF853P0CG23 659 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP49-204ENST00000423567 ST5P78524 1137 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 HDGFL1Q5TGJ6 251 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 CNBD1Q8NA66 436 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 NECTIN2Q92692 538 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 SCN7AQ01118 1682 aa14.19□□□□□ -0.14
USP49-204ENST00000423567 SENP3-EIF4A1A0A087X0R7 540 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 KRT24Q2M2I5 525 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 DUSP27Q5VZP5 1158 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 NBPF5PQ86XG9 351 aaPredicted RBP14.18□□□□□ -0.14
USP49-204ENST00000423567 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 CHMP4AQ9BY43 222 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 PIM2Q9P1W9 311 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 NIP7Q9Y221 180 aaKnown RBP eCLIP14.18□□□□□ -0.14
USP49-204ENST00000423567 BCS1LQ9Y276 419 aa14.18□□□□□ -0.14
USP49-204ENST00000423567 MAP3K15Q6ZN16 1313 aa14.17□□□□□ -0.14
USP49-204ENST00000423567 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
USP49-204ENST00000423567 TTLL7Q6ZT98 887 aa14.17□□□□□ -0.14
USP49-204ENST00000423567 PDZRN3Q9UPQ7 1066 aa14.17□□□□□ -0.14
USP49-204ENST00000423567 SALL2Q9Y467 1007 aaPredicted RBP14.17□□□□□ -0.14
USP49-204ENST00000423567 H0YIN7 160 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 GTF2E1P29083 439 aaPredicted RBP14.16□□□□□ -0.14
USP49-204ENST00000423567 CHRNA5P30532 468 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 PDE6BP35913 854 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 PDIA6Q15084 440 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 HLFQ16534 295 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 DALRD3Q5D0E6 543 aaKnown RBP14.16□□□□□ -0.14
USP49-204ENST00000423567 PRR5LQ6MZQ0 368 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 TPTE2Q6XPS3 522 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 BRIP1Q9BX63 1249 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 ZBTB3Q9H5J0 574 aa14.16□□□□□ -0.14
USP49-204ENST00000423567 DDX21Q9NR30 783 aaKnown RBP eCLIP14.16□□□□□ -0.14
USP49-204ENST00000423567 DBF4Q9UBU7 674 aaPredicted RBP14.16□□□□□ -0.14
USP49-204ENST00000423567 IL16Q14005 1332 aa14.15□□□□□ -0.14
USP49-204ENST00000423567 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
USP49-204ENST00000423567 ANXA1P04083 346 aa14.15□□□□□ -0.14
USP49-204ENST00000423567 PROSER3Q2NL68 480 aa14.15□□□□□ -0.14
USP49-204ENST00000423567 C2CD5Q86YS7 1000 aa14.15□□□□□ -0.14
USP49-204ENST00000423567 CHPF2Q9P2E5 772 aa14.15□□□□□ -0.14
USP49-204ENST00000423567 BCORQ6W2J9 1755 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 FAM177BA6PVY3 158 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 ELL2O00472 640 aaPredicted RBP14.14□□□□□ -0.15
USP49-204ENST00000423567 KCNA3P22001 575 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 AIMP1Q12904 312 aaKnown RBP14.14□□□□□ -0.15
USP49-204ENST00000423567 COPS6Q7L5N1 327 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 WDR63Q8IWG1 891 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 XAGE3Q8WTP9 111 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 NYXQ9GZU5 481 aa14.14□□□□□ -0.15
USP49-204ENST00000423567 CCER2I3L3R5 266 aa14.13□□□□□ -0.15
USP49-204ENST00000423567 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
USP49-204ENST00000423567 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
USP49-204ENST00000423567 CCDC24Q8N4L8 307 aa14.13□□□□□ -0.15
USP49-204ENST00000423567 HYPKQ9NX55 129 aa14.13□□□□□ -0.15
USP49-204ENST00000423567 ATP10DQ9P241 1426 aa14.13□□□□□ -0.15
USP49-204ENST00000423567 NRXN2Q9P2S2 1712 aa14.12□□□□□ -0.15
USP49-204ENST00000423567 GPTP24298 496 aa14.12□□□□□ -0.15
USP49-204ENST00000423567 ARHGAP27Q6ZUM4 889 aa14.12□□□□□ -0.15
USP49-204ENST00000423567 LRP10Q7Z4F1 713 aa14.12□□□□□ -0.15
USP49-204ENST00000423567 TTLL6Q8N841 843 aa14.12□□□□□ -0.15
USP49-204ENST00000423567 C8orf58Q8NAV2 365 aa14.12□□□□□ -0.15
USP49-204ENST00000423567 TSR2Q969E8 191 aaKnown RBP14.12□□□□□ -0.15
USP49-204ENST00000423567 PARP10Q53GL7 1025 aa14.11□□□□□ -0.15
USP49-204ENST00000423567 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
USP49-204ENST00000423567 PPP1R42Q7Z4L9 355 aa14.11□□□□□ -0.15
USP49-204ENST00000423567 ZNF622Q969S3 477 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP49-204ENST00000423567 N4BP2Q86UW6 1770 aaPredicted RBP14.11□□□□□ -0.15
USP49-204ENST00000423567 AFDNP55196 1824 aaKnown RBP14.11□□□□□ -0.15
USP49-204ENST00000423567 KIAA1551Q9HCM1 1747 aa14.1□□□□□ -0.15
USP49-204ENST00000423567 DIEXFQ68CQ4 756 aaKnown RBP14.1□□□□□ -0.15
USP49-204ENST00000423567 ZNF34Q8IZ26 560 aa14.1□□□□□ -0.15
USP49-204ENST00000423567 STK31Q9BXU1 1019 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms