RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 TAF1LQ8IZX4 1826 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 SBF1O95248 1867 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 POTECB2RU33 542 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 FCHSD2O94868 740 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 ATP6V1AP38606 617 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 ITPK1Q13572 414 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 CFAP44Q96MT7 982 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 ATG3Q9NT62 314 aa9.79□□□□□ -0.84
RFX3-205ENST00000420720 HSPA5P11021 654 aaKnown RBP9.78□□□□□ -0.84
RFX3-205ENST00000420720 VEGFAP15692 232 aaPredicted RBP9.78□□□□□ -0.84
RFX3-205ENST00000420720 SSFA2P28290 1259 aa9.78□□□□□ -0.84
RFX3-205ENST00000420720 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
RFX3-205ENST00000420720 UBR3Q6ZT12 1888 aa9.78□□□□□ -0.84
RFX3-205ENST00000420720 C4BP0C0L5 1744 aa9.77□□□□□ -0.85
RFX3-205ENST00000420720 GNPATO15228 680 aa9.77□□□□□ -0.85
RFX3-205ENST00000420720 DPEP1P16444 411 aa9.77□□□□□ -0.85
RFX3-205ENST00000420720 EIF4G2P78344 907 aaKnown RBP eCLIP9.77□□□□□ -0.85
RFX3-205ENST00000420720 FBXO22Q8NEZ5 403 aa9.77□□□□□ -0.85
RFX3-205ENST00000420720 PANK3Q9H999 370 aa9.77□□□□□ -0.85
RFX3-205ENST00000420720 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.85
RFX3-205ENST00000420720 KCNA3P22001 575 aa9.76□□□□□ -0.85
RFX3-205ENST00000420720 TGFB2P61812 414 aa9.76□□□□□ -0.85
RFX3-205ENST00000420720 PLEKHO1Q53GL0 409 aaPredicted RBP9.76□□□□□ -0.85
RFX3-205ENST00000420720 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
RFX3-205ENST00000420720 DCAF5Q96JK2 942 aa9.75□□□□□ -0.85
RFX3-205ENST00000420720 SLC4A9Q96Q91 983 aa9.75□□□□□ -0.85
RFX3-205ENST00000420720 KDM6AO15550 1401 aaPredicted RBP9.74□□□□□ -0.85
RFX3-205ENST00000420720 GLTPD2A6NH11 291 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 ERVV-2B6SEH9 535 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 HSP90AB1P08238 724 aaKnown RBP9.74□□□□□ -0.85
RFX3-205ENST00000420720 MMP10P09238 476 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 HOXB1P14653 301 aaPredicted RBP9.74□□□□□ -0.85
RFX3-205ENST00000420720 CABP4P57796 275 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 ZNF530Q6P9A1 599 aaPredicted RBP9.74□□□□□ -0.85
RFX3-205ENST00000420720 MORC1Q86VD1 984 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 MCOLN1Q9GZU1 580 aa9.74□□□□□ -0.85
RFX3-205ENST00000420720 RTCBQ9Y3I0 505 aaKnown RBP9.74□□□□□ -0.85
RFX3-205ENST00000420720 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
RFX3-205ENST00000420720 ARHGEF1Q92888 912 aaKnown RBP9.73□□□□□ -0.85
RFX3-205ENST00000420720 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
RFX3-205ENST00000420720 PASKQ96RG2 1323 aa9.73□□□□□ -0.85
RFX3-205ENST00000420720 TIAM2Q8IVF5 1701 aa9.73□□□□□ -0.85
RFX3-205ENST00000420720 PTCD1O75127 700 aaKnown RBP9.72□□□□□ -0.85
RFX3-205ENST00000420720 MTHFSP49914 203 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 RASSF7Q02833 373 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 AMOTQ4VCS5 1084 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 C1orf141Q5JVX7 400 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 RC3H1Q5TC82 1133 aaKnown RBP9.72□□□□□ -0.85
RFX3-205ENST00000420720 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 NLGN1Q8N2Q7 840 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
RFX3-205ENST00000420720 KDRP35968 1356 aa9.72□□□□□ -0.85
RFX3-205ENST00000420720 THSD7BQ9C0I4 1608 aa9.71□□□□□ -0.85
RFX3-205ENST00000420720 LTBP1Q14766 1721 aa9.71□□□□□ -0.85
RFX3-205ENST00000420720 A0A0C4DFX4 3053 aa9.71□□□□□ -0.85
RFX3-205ENST00000420720 RGL2O15211 777 aa9.71□□□□□ -0.86
RFX3-205ENST00000420720 RPS6KA4O75676 772 aa9.71□□□□□ -0.86
RFX3-205ENST00000420720 GYS1P13807 737 aa9.71□□□□□ -0.86
RFX3-205ENST00000420720 RFC4P35249 363 aa9.71□□□□□ -0.86
RFX3-205ENST00000420720 DOK7Q18PE1 504 aa9.71□□□□□ -0.86
RFX3-205ENST00000420720 NFATC2IPQ8NCF5 419 aa9.71□□□□□ -0.86
RFX3-205ENST00000420720 ITGB4P16144 1822 aa9.7□□□□□ -0.86
RFX3-205ENST00000420720 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
RFX3-205ENST00000420720 CCDC87Q9NVE4 849 aa9.7□□□□□ -0.86
RFX3-205ENST00000420720 KNSTRNQ9Y448 316 aa9.7□□□□□ -0.86
RFX3-205ENST00000420720 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
RFX3-205ENST00000420720 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
RFX3-205ENST00000420720 C4AP0C0L4 1744 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 MAP2P11137 1827 aaKnown RBP9.69□□□□□ -0.86
RFX3-205ENST00000420720 IL13P35225 146 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 SOX10P56693 466 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 MAP2K1Q02750 393 aaPredicted RBP9.69□□□□□ -0.86
RFX3-205ENST00000420720 ZNF710Q8N1W2 664 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 SRP68Q9UHB9 627 aaKnown RBP9.69□□□□□ -0.86
RFX3-205ENST00000420720 TSKSQ9UJT2 592 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 PARP3Q9Y6F1 533 aa9.69□□□□□ -0.86
RFX3-205ENST00000420720 RASSF10A6NK89 507 aa9.68□□□□□ -0.86
RFX3-205ENST00000420720 TMEM88BA6NKF7 163 aa9.68□□□□□ -0.86
RFX3-205ENST00000420720 DLL1O00548 723 aa9.68□□□□□ -0.86
RFX3-205ENST00000420720 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
RFX3-205ENST00000420720 CRKLP46109 303 aaKnown RBP9.68□□□□□ -0.86
RFX3-205ENST00000420720 WDR33Q9C0J8 1336 aaKnown RBP9.67□□□□□ -0.86
RFX3-205ENST00000420720 DALRD3Q5D0E6 543 aaKnown RBP9.67□□□□□ -0.86
RFX3-205ENST00000420720 AKAP4Q5JQC9 854 aa9.67□□□□□ -0.86
RFX3-205ENST00000420720 HABP4Q5JVS0 413 aaKnown RBP9.67□□□□□ -0.86
RFX3-205ENST00000420720 LGR6Q9HBX8 967 aa9.67□□□□□ -0.86
RFX3-205ENST00000420720 PIM2Q9P1W9 311 aa9.67□□□□□ -0.86
RFX3-205ENST00000420720 SZT2Q5T011 3432 aa9.66□□□□□ -0.86
RFX3-205ENST00000420720 USP42Q9H9J4 1324 aaKnown RBP9.66□□□□□ -0.86
RFX3-205ENST00000420720 STK25O00506 426 aa9.66□□□□□ -0.86
RFX3-205ENST00000420720 HMOX1P09601 288 aa9.66□□□□□ -0.86
RFX3-205ENST00000420720 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
RFX3-205ENST00000420720 AMER1Q5JTC6 1135 aaPredicted RBP9.66□□□□□ -0.86
RFX3-205ENST00000420720 INTS5Q6P9B9 1019 aaKnown RBP9.66□□□□□ -0.86
RFX3-205ENST00000420720 DNAJC10Q8IXB1 793 aa9.66□□□□□ -0.86
RFX3-205ENST00000420720 KIF7Q2M1P5 1343 aa9.65□□□□□ -0.86
RFX3-205ENST00000420720 RNMTO43148 476 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms