RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 HTRA3P83110 453 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 NBPF10Q6P3W6 841 aaKnown RBP23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 NBPF15Q8N660 670 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 KLRG1Q96E93 195 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 TBC1D2BQ9UPU7 963 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 SBF1O95248 1867 aa23.66■■□□□ 1.38
ECHDC3-202ENST00000420401 MBIPQ9NS73 344 aa23.65■■□□□ 1.38
ECHDC3-202ENST00000420401 RNF181Q9P0P0 153 aa23.65■■□□□ 1.38
ECHDC3-202ENST00000420401 DZIP3Q86Y13 1208 aaKnown RBP23.64■■□□□ 1.37
ECHDC3-202ENST00000420401 NGEFQ8N5V2 710 aa23.64■■□□□ 1.37
ECHDC3-202ENST00000420401 ERBB4Q15303 1308 aa23.63■■□□□ 1.37
ECHDC3-202ENST00000420401 EIF2S2P20042 333 aaKnown RBP23.63■■□□□ 1.37
ECHDC3-202ENST00000420401 TM4SF1P30408 202 aa23.63■■□□□ 1.37
ECHDC3-202ENST00000420401 RRAGCQ9HB90 399 aa23.63■■□□□ 1.37
ECHDC3-202ENST00000420401 TNRC6CQ9HCJ0 1690 aaKnown RBP23.63■■□□□ 1.37
ECHDC3-202ENST00000420401 BCL2L12Q9HB09 334 aa23.62■■□□□ 1.37
ECHDC3-202ENST00000420401 SALL2Q9Y467 1007 aaPredicted RBP23.62■■□□□ 1.37
ECHDC3-202ENST00000420401 LAMB4A4D0S4 1761 aa23.61■■□□□ 1.37
ECHDC3-202ENST00000420401 HOXB7P09629 217 aa23.61■■□□□ 1.37
ECHDC3-202ENST00000420401 IL16Q14005 1332 aa23.6■■□□□ 1.37
ECHDC3-202ENST00000420401 CAMTA2O94983 1202 aa23.6■■□□□ 1.37
ECHDC3-202ENST00000420401 COL13A1Q5TAT6 717 aaPredicted RBP23.6■■□□□ 1.37
ECHDC3-202ENST00000420401 JMYQ8N9B5 988 aa23.6■■□□□ 1.37
ECHDC3-202ENST00000420401 MYL6BP14649 208 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 CHRNA5P30532 468 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 DDR1Q08345 913 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 NFIXQ14938 502 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 KRT24Q2M2I5 525 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 WDR63Q8IWG1 891 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 ZNF652Q9Y2D9 606 aa23.59■■□□□ 1.37
ECHDC3-202ENST00000420401 POLRMTO00411 1230 aaKnown RBP23.58■■□□□ 1.37
ECHDC3-202ENST00000420401 RGL2O15211 777 aa23.58■■□□□ 1.37
ECHDC3-202ENST00000420401 DUSP27Q5VZP5 1158 aa23.58■■□□□ 1.37
ECHDC3-202ENST00000420401 CLEC4GQ6UXB4 293 aa23.58■■□□□ 1.37
ECHDC3-202ENST00000420401 CAPN15O75808 1086 aa23.57■■□□□ 1.36
ECHDC3-202ENST00000420401 KIF6Q6ZMV9 814 aa23.57■■□□□ 1.36
ECHDC3-202ENST00000420401 SMC1BQ8NDV3 1235 aa23.57■■□□□ 1.36
ECHDC3-202ENST00000420401 HDGFL1Q5TGJ6 251 aa23.56■■□□□ 1.36
ECHDC3-202ENST00000420401 BICDL1Q6ZP65 573 aa23.56■■□□□ 1.36
ECHDC3-202ENST00000420401 MIER1Q8N108 512 aa23.56■■□□□ 1.36
ECHDC3-202ENST00000420401 NECTIN2Q92692 538 aa23.56■■□□□ 1.36
ECHDC3-202ENST00000420401 PDIA6Q15084 440 aa23.55■■□□□ 1.36
ECHDC3-202ENST00000420401 TBC1D9BQ66K14 1250 aa23.55■■□□□ 1.36
ECHDC3-202ENST00000420401 SETDB2Q96T68 719 aa23.55■■□□□ 1.36
ECHDC3-202ENST00000420401 CHMP4AQ9BY43 222 aa23.55■■□□□ 1.36
ECHDC3-202ENST00000420401 CCDC88AQ3V6T2 1871 aa23.54■■□□□ 1.36
ECHDC3-202ENST00000420401 SERPINB2P05120 415 aa23.54■■□□□ 1.36
ECHDC3-202ENST00000420401 TNS4Q8IZW8 715 aa23.54■■□□□ 1.36
ECHDC3-202ENST00000420401 DDX21Q9NR30 783 aaKnown RBP eCLIP23.54■■□□□ 1.36
ECHDC3-202ENST00000420401 ERVV-1B6SEH8 477 aa23.53■■□□□ 1.36
ECHDC3-202ENST00000420401 TSR2Q969E8 191 aaKnown RBP23.53■■□□□ 1.36
ECHDC3-202ENST00000420401 AFDNP55196 1824 aaKnown RBP23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 SCN7AQ01118 1682 aa23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 ELL2O00472 640 aaPredicted RBP23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 TTLL7Q6ZT98 887 aa23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 C8orf58Q8NAV2 365 aa23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 DBF4Q9UBU7 674 aaPredicted RBP23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 MAP3K15Q6ZN16 1313 aa23.52■■□□□ 1.36
ECHDC3-202ENST00000420401 PROSER3Q2NL68 480 aa23.51■■□□□ 1.35
ECHDC3-202ENST00000420401 ZC3H4Q9UPT8 1303 aaKnown RBP23.51■■□□□ 1.35
ECHDC3-202ENST00000420401 CARMIL3Q8ND23 1372 aa23.51■■□□□ 1.35
ECHDC3-202ENST00000420401 PCNTO95613 3336 aa23.5■■□□□ 1.35
ECHDC3-202ENST00000420401 ANXA1P04083 346 aa23.5■■□□□ 1.35
ECHDC3-202ENST00000420401 RASSF7Q02833 373 aa23.5■■□□□ 1.35
ECHDC3-202ENST00000420401 LRP10Q7Z4F1 713 aa23.5■■□□□ 1.35
ECHDC3-202ENST00000420401 CHPF2Q9P2E5 772 aa23.5■■□□□ 1.35
ECHDC3-202ENST00000420401 VEGFAP15692 232 aaPredicted RBP23.49■■□□□ 1.35
ECHDC3-202ENST00000420401 GOLGA2Q08379 1002 aa23.49■■□□□ 1.35
ECHDC3-202ENST00000420401 HLFQ16534 295 aa23.49■■□□□ 1.35
ECHDC3-202ENST00000420401 LMNB1P20700 586 aa23.48■■□□□ 1.35
ECHDC3-202ENST00000420401 COPS6Q7L5N1 327 aa23.48■■□□□ 1.35
ECHDC3-202ENST00000420401 ZBTB3Q9H5J0 574 aa23.48■■□□□ 1.35
ECHDC3-202ENST00000420401 MYH16Q9H6N6 1097 aa23.48■■□□□ 1.35
ECHDC3-202ENST00000420401 HYPKQ9NX55 129 aa23.48■■□□□ 1.35
ECHDC3-202ENST00000420401 NIP7Q9Y221 180 aaKnown RBP eCLIP23.48■■□□□ 1.35
ECHDC3-202ENST00000420401 BCORQ6W2J9 1755 aa23.47■■□□□ 1.35
ECHDC3-202ENST00000420401 NPHP1O15259 732 aa23.47■■□□□ 1.35
ECHDC3-202ENST00000420401 CCDC30Q5VVM6 783 aa23.47■■□□□ 1.35
ECHDC3-202ENST00000420401 XAGE3Q8WTP9 111 aa23.47■■□□□ 1.35
ECHDC3-202ENST00000420401 FANCIQ9NVI1 1328 aa23.47■■□□□ 1.35
ECHDC3-202ENST00000420401 GLTPD2A6NH11 291 aa23.46■■□□□ 1.35
ECHDC3-202ENST00000420401 AIMP1Q12904 312 aaKnown RBP23.46■■□□□ 1.35
ECHDC3-202ENST00000420401 NBPF5PQ86XG9 351 aaPredicted RBP23.46■■□□□ 1.35
ECHDC3-202ENST00000420401 TSPYL6Q8N831 410 aa23.46■■□□□ 1.35
ECHDC3-202ENST00000420401 DLEC1Q9Y238 1755 aa23.46■■□□□ 1.35
ECHDC3-202ENST00000420401 TIAM2Q8IVF5 1701 aa23.45■■□□□ 1.34
ECHDC3-202ENST00000420401 TWISTNBQ3B726 338 aaPredicted RBP23.45■■□□□ 1.34
ECHDC3-202ENST00000420401 CNBD1Q8NA66 436 aa23.45■■□□□ 1.34
ECHDC3-202ENST00000420401 ZNF521Q96K83 1311 aa23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 PRELPP51888 382 aa23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 ST5P78524 1137 aa23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 PRR5LQ6MZQ0 368 aa23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 TPTE2Q6XPS3 522 aa23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 GIGYF2Q6Y7W6 1299 aaKnown RBP23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 TTLL6Q8N841 843 aa23.44■■□□□ 1.34
ECHDC3-202ENST00000420401 NRXN2Q9P2S2 1712 aa23.43■■□□□ 1.34
ECHDC3-202ENST00000420401 BRIP1Q9BX63 1249 aa23.43■■□□□ 1.34
ECHDC3-202ENST00000420401 SPINK5Q9NQ38 1064 aaPredicted RBP23.43■■□□□ 1.34
ECHDC3-202ENST00000420401 HSPA1AP0DMV8 641 aaKnown RBP23.42■■□□□ 1.34
ECHDC3-202ENST00000420401 HSPA1BP0DMV9 641 aaKnown RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms