RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 ABHD17AQ96GS6 310 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 GMCL1Q96IK5 515 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 BCS1LQ9Y276 419 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 CHMP3Q9Y3E7 222 aa8.78□□□□□ -1
HMGB1P49-201ENST00000418882 EFHC2Q5JST6 749 aa8.77□□□□□ -1.01
HMGB1P49-201ENST00000418882 NLRP8Q86W28 1048 aa8.77□□□□□ -1.01
HMGB1P49-201ENST00000418882 SAP130Q9H0E3 1048 aa8.77□□□□□ -1.01
HMGB1P49-201ENST00000418882 LRFN2Q9ULH4 789 aa8.77□□□□□ -1.01
HMGB1P49-201ENST00000418882 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 LBRQ14739 615 aaKnown RBP8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 SUSD3Q96L08 255 aa8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 CNTNAP3BQ96NU0 1288 aa8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 CNTNAP3Q9BZ76 1288 aa8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 KLK14Q9P0G3 267 aa8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 SEPT3Q9UH03 358 aa8.76□□□□□ -1.01
HMGB1P49-201ENST00000418882 DCDC2BA2VCK2 349 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 WIPF1O43516 503 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 SSFA2P28290 1259 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 RTN1Q16799 776 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 STRN4Q9NRL3 753 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 USTQ9Y2C2 406 aa8.75□□□□□ -1.01
HMGB1P49-201ENST00000418882 NAA30Q147X3 362 aaPredicted RBP8.74□□□□□ -1.01
HMGB1P49-201ENST00000418882 GRIN2CQ14957 1233 aa8.74□□□□□ -1.01
HMGB1P49-201ENST00000418882 COX20Q5RI15 118 aa8.74□□□□□ -1.01
HMGB1P49-201ENST00000418882 ATXN7O15265 892 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 EFSO43281 561 aa8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 TNP2Q05952 138 aa8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 DGKZQ13574 1117 aa8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 SAMD5Q5TGI4 173 aa8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 MYO19Q96H55 970 aa8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 PCDHGC4Q9Y5F7 938 aa8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 GPC6Q9Y625 555 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P49-201ENST00000418882 C2CD2LO14523 706 aa8.72□□□□□ -1.01
HMGB1P49-201ENST00000418882 TNFRSF10BO14763 440 aa8.72□□□□□ -1.01
HMGB1P49-201ENST00000418882 MAPTP10636 758 aaKnown RBP8.72□□□□□ -1.01
HMGB1P49-201ENST00000418882 CTBSQ01459 385 aa8.72□□□□□ -1.01
HMGB1P49-201ENST00000418882 VTI1AQ96AJ9 217 aa8.72□□□□□ -1.01
HMGB1P49-201ENST00000418882 DMGDHQ9UI17 866 aaKnown RBP8.72□□□□□ -1.01
HMGB1P49-201ENST00000418882 KHNYNO15037 678 aaKnown RBP8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 FAM157BP0CG42 384 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 CD33P20138 364 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 GRNP28799 593 aaKnown RBP8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 TYRO3Q06418 890 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 FIGNL1Q6PIW4 674 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 COL26A1Q96A83 441 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 TRERF1Q96PN7 1200 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 CFHR5Q9BXR6 569 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 ATXN7L1Q9ULK2 861 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 GJA3Q9Y6H8 435 aa8.71□□□□□ -1.02
HMGB1P49-201ENST00000418882 FGFR3P22607 806 aa8.7□□□□□ -1.02
HMGB1P49-201ENST00000418882 FOXR1Q6PIV2 292 aa8.7□□□□□ -1.02
HMGB1P49-201ENST00000418882 SFSWAPQ12872 951 aaKnown RBP8.69□□□□□ -1.02
HMGB1P49-201ENST00000418882 C16orf46Q6P387 395 aa8.69□□□□□ -1.02
HMGB1P49-201ENST00000418882 BTLAQ7Z6A9 289 aa8.69□□□□□ -1.02
HMGB1P49-201ENST00000418882 WHAMMQ8TF30 809 aa8.69□□□□□ -1.02
HMGB1P49-201ENST00000418882 MBIPQ9NS73 344 aa8.69□□□□□ -1.02
HMGB1P49-201ENST00000418882 IGF1RP08069 1367 aa8.69□□□□□ -1.02
HMGB1P49-201ENST00000418882 TGFBR3LH3BV60 316 aa8.68□□□□□ -1.02
HMGB1P49-201ENST00000418882 ADAMTS2O95450 1211 aa8.68□□□□□ -1.02
HMGB1P49-201ENST00000418882 MX2P20592 715 aa8.68□□□□□ -1.02
HMGB1P49-201ENST00000418882 ETFBKMTQ8IXQ9 262 aa8.68□□□□□ -1.02
HMGB1P49-201ENST00000418882 PTCD1O75127 700 aaKnown RBP8.67□□□□□ -1.02
HMGB1P49-201ENST00000418882 SLURP2P0DP57 97 aa8.67□□□□□ -1.02
HMGB1P49-201ENST00000418882 C11orf91Q3C1V1 193 aa8.67□□□□□ -1.02
HMGB1P49-201ENST00000418882 CEP63Q96MT8 703 aa8.67□□□□□ -1.02
HMGB1P49-201ENST00000418882 NEUROD4Q9HD90 331 aa8.67□□□□□ -1.02
HMGB1P49-201ENST00000418882 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
HMGB1P49-201ENST00000418882 SRSF11Q05519 484 aaKnown RBP8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 MTMR3Q13615 1198 aa8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 IER5Q5VY09 327 aa8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 IFT43Q96FT9 208 aa8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 PHF24Q9UPV7 400 aa8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 USP20Q9Y2K6 914 aa8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
HMGB1P49-201ENST00000418882 ZBTB39O15060 712 aa8.65□□□□□ -1.02
HMGB1P49-201ENST00000418882 INPP5BP32019 993 aa8.65□□□□□ -1.02
HMGB1P49-201ENST00000418882 IDH3AP50213 366 aa8.65□□□□□ -1.02
HMGB1P49-201ENST00000418882 GTF3C2Q8WUA4 911 aaPredicted RBP8.65□□□□□ -1.02
HMGB1P49-201ENST00000418882 SLC30A3Q99726 388 aa8.65□□□□□ -1.02
HMGB1P49-201ENST00000418882 KLF15Q9UIH9 416 aa8.65□□□□□ -1.02
HMGB1P49-201ENST00000418882 OPLAHO14841 1288 aa8.64□□□□□ -1.03
HMGB1P49-201ENST00000418882 MICAL2O94851 1124 aa8.64□□□□□ -1.03
HMGB1P49-201ENST00000418882 ZNF385CQ66K41 422 aaPredicted RBP8.64□□□□□ -1.03
HMGB1P49-201ENST00000418882 ACDQ96AP0 544 aa8.64□□□□□ -1.03
HMGB1P49-201ENST00000418882 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.64□□□□□ -1.03
HMGB1P49-201ENST00000418882 MARK1Q9P0L2 795 aa8.64□□□□□ -1.03
HMGB1P49-201ENST00000418882 BMP4P12644 408 aa8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 KCNQ4P56696 695 aa8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 FAM182BQ5T319 152 aa8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 LYPD4Q6UWN0 246 aa8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 C1orf229Q6ZS94 237 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 RAB44Q7Z6P3 723 aaPredicted RBP8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 TREML1Q86YW5 311 aa8.63□□□□□ -1.03
HMGB1P49-201ENST00000418882 SERPINB4P48594 390 aa8.62□□□□□ -1.03
HMGB1P49-201ENST00000418882 ZNF211Q13398 564 aaPredicted RBP8.62□□□□□ -1.03
HMGB1P49-201ENST00000418882 LAMC2Q13753 1193 aa8.62□□□□□ -1.03
HMGB1P49-201ENST00000418882 HIF1AQ16665 826 aa8.62□□□□□ -1.03
HMGB1P49-201ENST00000418882 HELQQ8TDG4 1101 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms