RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ERVV-1B6SEH8 477 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 NPHP1O15259 732 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 MYL6BP14649 208 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 ST5P78524 1137 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 HLFQ16534 295 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 CCDC184Q52MB2 194 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 CCDC24Q8N4L8 307 aa21.53■■□□□ 1.04
LINC00404-201ENST00000418660 NIP7Q9Y221 180 aaKnown RBP eCLIP21.53■■□□□ 1.04
LINC00404-201ENST00000418660 LAS1LQ9Y4W2 734 aaKnown RBP21.53■■□□□ 1.04
LINC00404-201ENST00000418660 EIF2S2P20042 333 aaKnown RBP21.52■■□□□ 1.04
LINC00404-201ENST00000418660 KIF6Q6ZMV9 814 aa21.52■■□□□ 1.04
LINC00404-201ENST00000418660 NBPF5PQ86XG9 351 aaPredicted RBP21.52■■□□□ 1.04
LINC00404-201ENST00000418660 TTLL6Q8N841 843 aa21.52■■□□□ 1.04
LINC00404-201ENST00000418660 MAP3K15Q6ZN16 1313 aa21.52■■□□□ 1.03
LINC00404-201ENST00000418660 DLEC1Q9Y238 1755 aa21.51■■□□□ 1.03
LINC00404-201ENST00000418660 ANP32CO43423 234 aa21.51■■□□□ 1.03
LINC00404-201ENST00000418660 TTLL7Q6ZT98 887 aa21.51■■□□□ 1.03
LINC00404-201ENST00000418660 ANKRD31Q8N7Z5 1873 aa21.5■■□□□ 1.03
LINC00404-201ENST00000418660 PDIA6Q15084 440 aa21.5■■□□□ 1.03
LINC00404-201ENST00000418660 TPTE2Q6XPS3 522 aa21.5■■□□□ 1.03
LINC00404-201ENST00000418660 CFAP44Q96MT7 982 aa21.5■■□□□ 1.03
LINC00404-201ENST00000418660 LRP10Q7Z4F1 713 aa21.48■■□□□ 1.03
LINC00404-201ENST00000418660 ZNF622Q969S3 477 aaKnown RBP eCLIP21.48■■□□□ 1.03
LINC00404-201ENST00000418660 GPBP1L1Q9HC44 474 aaPredicted RBP21.48■■□□□ 1.03
LINC00404-201ENST00000418660 CALD1Q05682 793 aaKnown RBP21.47■■□□□ 1.03
LINC00404-201ENST00000418660 KRT24Q2M2I5 525 aa21.47■■□□□ 1.03
LINC00404-201ENST00000418660 ZBTB3Q9H5J0 574 aa21.47■■□□□ 1.03
LINC00404-201ENST00000418660 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
LINC00404-201ENST00000418660 C9orf131Q5VYM1 1079 aa21.46■■□□□ 1.03
LINC00404-201ENST00000418660 STYK1Q6J9G0 422 aa21.46■■□□□ 1.03
LINC00404-201ENST00000418660 FAM177BA6PVY3 158 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 HOXB7P09629 217 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 SRGNP10124 158 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 PROSER3Q2NL68 480 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 GIGYF2Q6Y7W6 1299 aaKnown RBP21.45■■□□□ 1.02
LINC00404-201ENST00000418660 ZNF526Q8TF50 670 aaPredicted RBP21.45■■□□□ 1.02
LINC00404-201ENST00000418660 NECTIN2Q92692 538 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 MRS2Q9HD23 443 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 IFT57Q9NWB7 429 aa21.45■■□□□ 1.02
LINC00404-201ENST00000418660 COL11A2P13942 1736 aaPredicted RBP21.44■■□□□ 1.02
LINC00404-201ENST00000418660 KLRG2A4D1S0 409 aaPredicted RBP21.44■■□□□ 1.02
LINC00404-201ENST00000418660 ANXA1P04083 346 aa21.44■■□□□ 1.02
LINC00404-201ENST00000418660 GTF2E1P29083 439 aaPredicted RBP21.44■■□□□ 1.02
LINC00404-201ENST00000418660 C1QTNF8P60827 252 aa21.44■■□□□ 1.02
LINC00404-201ENST00000418660 CNKSR1Q969H4 720 aa21.44■■□□□ 1.02
LINC00404-201ENST00000418660 MASTLQ96GX5 879 aa21.44■■□□□ 1.02
LINC00404-201ENST00000418660 NYXQ9GZU5 481 aa21.44■■□□□ 1.02
LINC00404-201ENST00000418660 DDX21Q9NR30 783 aaKnown RBP eCLIP21.44■■□□□ 1.02
LINC00404-201ENST00000418660 MBIPQ9NS73 344 aa21.44■■□□□ 1.02
LINC00404-201ENST00000418660 GNAI1P63096 354 aa21.43■■□□□ 1.02
LINC00404-201ENST00000418660 ZNF34Q8IZ26 560 aa21.43■■□□□ 1.02
LINC00404-201ENST00000418660 NUP98P52948 1817 aa21.43■■□□□ 1.02
LINC00404-201ENST00000418660 GPTP24298 496 aa21.42■■□□□ 1.02
LINC00404-201ENST00000418660 RNF181Q9P0P0 153 aa21.42■■□□□ 1.02
LINC00404-201ENST00000418660 UBN2Q6ZU65 1347 aa21.41■■□□□ 1.02
LINC00404-201ENST00000418660 NPR1P16066 1061 aa21.41■■□□□ 1.02
LINC00404-201ENST00000418660 HDGFL1Q5TGJ6 251 aa21.41■■□□□ 1.02
LINC00404-201ENST00000418660 DUSP27Q5VZP5 1158 aa21.41■■□□□ 1.02
LINC00404-201ENST00000418660 COPS6Q7L5N1 327 aa21.41■■□□□ 1.02
LINC00404-201ENST00000418660 IBTKQ9P2D0 1353 aaPredicted RBP21.4■■□□□ 1.02
LINC00404-201ENST00000418660 C21orf2O43822 256 aa21.4■■□□□ 1.02
LINC00404-201ENST00000418660 RASSF7Q02833 373 aa21.4■■□□□ 1.02
LINC00404-201ENST00000418660 SUSD4Q5VX71 490 aa21.4■■□□□ 1.02
LINC00404-201ENST00000418660 XAGE3Q8WTP9 111 aa21.4■■□□□ 1.02
LINC00404-201ENST00000418660 CHPF2Q9P2E5 772 aa21.4■■□□□ 1.02
LINC00404-201ENST00000418660 LMNB1P20700 586 aa21.39■■□□□ 1.01
LINC00404-201ENST00000418660 AIMP1Q12904 312 aaKnown RBP21.39■■□□□ 1.01
LINC00404-201ENST00000418660 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
LINC00404-201ENST00000418660 PARP10Q53GL7 1025 aa21.39■■□□□ 1.01
LINC00404-201ENST00000418660 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
LINC00404-201ENST00000418660 NUTM1Q86Y26 1132 aa21.39■■□□□ 1.01
LINC00404-201ENST00000418660 ZNF219Q9P2Y4 722 aaPredicted RBP21.39■■□□□ 1.01
LINC00404-201ENST00000418660 DBF4Q9UBU7 674 aaPredicted RBP21.39■■□□□ 1.01
LINC00404-201ENST00000418660 NFKBIEO00221 500 aa21.38■■□□□ 1.01
LINC00404-201ENST00000418660 ERFEQ4G0M1 354 aa21.38■■□□□ 1.01
LINC00404-201ENST00000418660 PPP1R42Q7Z4L9 355 aa21.38■■□□□ 1.01
LINC00404-201ENST00000418660 PRELPP51888 382 aa21.37■■□□□ 1.01
LINC00404-201ENST00000418660 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
LINC00404-201ENST00000418660 HSP90AB3PQ58FF7 597 aa21.37■■□□□ 1.01
LINC00404-201ENST00000418660 SOGA3Q5TF21 947 aa21.37■■□□□ 1.01
LINC00404-201ENST00000418660 ABCC12Q96J65 1359 aa21.36■■□□□ 1.01
LINC00404-201ENST00000418660 NTSR2O95665 410 aa21.36■■□□□ 1.01
LINC00404-201ENST00000418660 SBF1O95248 1867 aa21.36■■□□□ 1.01
LINC00404-201ENST00000418660 RIC1Q4ADV7 1423 aa21.36■■□□□ 1.01
LINC00404-201ENST00000418660 ZC3H4Q9UPT8 1303 aaKnown RBP21.35■■□□□ 1.01
LINC00404-201ENST00000418660 SLX4Q8IY92 1834 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 ALDH1B1P30837 517 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 CRY2Q49AN0 593 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 WWC1Q8IX03 1113 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 C7orf43Q8WVR3 580 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 HYPKQ9NX55 129 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 ARFGEF2Q9Y6D5 1785 aa21.35■■□□□ 1.01
LINC00404-201ENST00000418660 KIF3CO14782 793 aa21.34■■□□□ 1.01
LINC00404-201ENST00000418660 TCIRG1Q13488 830 aa21.34■■□□□ 1.01
LINC00404-201ENST00000418660 PLBD2Q8NHP8 589 aa21.34■■□□□ 1.01
LINC00404-201ENST00000418660 UTP14AQ9BVJ6 771 aaKnown RBP21.34■■□□□ 1.01
LINC00404-201ENST00000418660 KDM2BQ8NHM5 1336 aa21.33■■□□□ 1.01
LINC00404-201ENST00000418660 LTBP3Q9NS15 1303 aa21.33■■□□□ 1.01
LINC00404-201ENST00000418660 SENP3-EIF4A1A0A087X0R7 540 aa21.33■■□□□ 1.01
LINC00404-201ENST00000418660 ELL2O00472 640 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms