RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 ZPR1O75312 459 aa8.59□□□□□ -1.03
VNN3-205ENST00000417437 HSP90AB1P08238 724 aaKnown RBP8.59□□□□□ -1.03
VNN3-205ENST00000417437 CT47B1P0C2W7 299 aaPredicted RBP8.59□□□□□ -1.03
VNN3-205ENST00000417437 NEUROD2Q15784 382 aa8.59□□□□□ -1.03
VNN3-205ENST00000417437 DPY19L2Q6NUT2 758 aa8.59□□□□□ -1.03
VNN3-205ENST00000417437 SAMD1Q6SPF0 538 aaPredicted RBP8.59□□□□□ -1.03
VNN3-205ENST00000417437 UPF2Q9HAU5 1272 aaKnown RBP8.59□□□□□ -1.03
VNN3-205ENST00000417437 CNTNAP4Q9C0A0 1308 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 ERVV-2B6SEH9 535 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 LMNB1P20700 586 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 KCNA3P22001 575 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 TNNT2P45379 298 aaPredicted RBP8.58□□□□□ -1.04
VNN3-205ENST00000417437 MTHFSP49914 203 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 RASSF7Q02833 373 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 AIDAQ96BJ3 306 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 EYA1Q99502 592 aa8.58□□□□□ -1.04
VNN3-205ENST00000417437 SRP68Q9UHB9 627 aaKnown RBP8.58□□□□□ -1.04
VNN3-205ENST00000417437 RRP7AQ9Y3A4 280 aaKnown RBP8.58□□□□□ -1.04
VNN3-205ENST00000417437 ZC3H4Q9UPT8 1303 aaKnown RBP8.57□□□□□ -1.04
VNN3-205ENST00000417437 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
VNN3-205ENST00000417437 PLEKHO1Q53GL0 409 aaPredicted RBP8.57□□□□□ -1.04
VNN3-205ENST00000417437 C1orf141Q5JVX7 400 aa8.57□□□□□ -1.04
VNN3-205ENST00000417437 MKRN1Q9UHC7 482 aaKnown RBP8.57□□□□□ -1.04
VNN3-205ENST00000417437 MYH14Q7Z406 1995 aaKnown RBP8.57□□□□□ -1.04
VNN3-205ENST00000417437 COL5A3P25940 1745 aaPredicted RBP8.57□□□□□ -1.04
VNN3-205ENST00000417437 U2AF1L5P0DN76 240 aaPredicted RBP8.56□□□□□ -1.04
VNN3-205ENST00000417437 CRKLP46109 303 aaKnown RBP8.56□□□□□ -1.04
VNN3-205ENST00000417437 U2AF1Q01081 240 aaKnown RBP eCLIP8.56□□□□□ -1.04
VNN3-205ENST00000417437 ZKSCAN2Q63HK3 967 aa8.56□□□□□ -1.04
VNN3-205ENST00000417437 ZNF530Q6P9A1 599 aaPredicted RBP8.56□□□□□ -1.04
VNN3-205ENST00000417437 PNNQ9H307 717 aaKnown RBP8.56□□□□□ -1.04
VNN3-205ENST00000417437 PDZRN3Q9UPQ7 1066 aa8.56□□□□□ -1.04
VNN3-205ENST00000417437 H0YIN7 160 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 FRAT2O75474 233 aaPredicted RBP8.55□□□□□ -1.04
VNN3-205ENST00000417437 DDR1Q08345 913 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 POLA2Q14181 598 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 TTLL6Q8N841 843 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 SLC4A9Q96Q91 983 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 KDRP35968 1356 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
VNN3-205ENST00000417437 USP42Q9H9J4 1324 aaKnown RBP8.54□□□□□ -1.04
VNN3-205ENST00000417437 TIAM2Q8IVF5 1701 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 NPHP1O15259 732 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 MVPQ14764 893 aaKnown RBP8.54□□□□□ -1.04
VNN3-205ENST00000417437 AMOTQ4VCS5 1084 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 USPL1Q5W0Q7 1092 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 C2CD5Q86YS7 1000 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 DZIP1LQ8IYY4 767 aaKnown RBP8.54□□□□□ -1.04
VNN3-205ENST00000417437 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 ZNF622Q969S3 477 aaKnown RBP eCLIP8.54□□□□□ -1.04
VNN3-205ENST00000417437 PCDHB15Q9Y5E8 787 aa8.54□□□□□ -1.04
VNN3-205ENST00000417437 AFDNP55196 1824 aaKnown RBP8.53□□□□□ -1.04
VNN3-205ENST00000417437 POLRMTO00411 1230 aaKnown RBP8.53□□□□□ -1.04
VNN3-205ENST00000417437 CTCFP49711 727 aaPredicted RBP8.53□□□□□ -1.04
VNN3-205ENST00000417437 ERFEQ4G0M1 354 aa8.53□□□□□ -1.04
VNN3-205ENST00000417437 CHADLQ6NUI6 762 aa8.53□□□□□ -1.04
VNN3-205ENST00000417437 FTSJ3Q8IY81 847 aaKnown RBP8.53□□□□□ -1.04
VNN3-205ENST00000417437 NFATC2IPQ8NCF5 419 aa8.53□□□□□ -1.04
VNN3-205ENST00000417437 CREBZFQ9NS37 354 aa8.53□□□□□ -1.04
VNN3-205ENST00000417437 IL16Q14005 1332 aa8.53□□□□□ -1.04
VNN3-205ENST00000417437 ANKRD26Q9UPS8 1709 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 FOXN1O15353 648 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 IPO8O15397 1037 aaKnown RBP8.52□□□□□ -1.05
VNN3-205ENST00000417437 SEC24BO95487 1268 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 SERPINB2P05120 415 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 RLBP1P12271 317 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 EIF4A2Q14240 407 aaKnown RBP8.52□□□□□ -1.05
VNN3-205ENST00000417437 BICDL1Q6ZP65 573 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 TBC1D32Q96NH3 1257 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 CLEC11AQ9Y240 323 aa8.52□□□□□ -1.05
VNN3-205ENST00000417437 DICER1Q9UPY3 1922 aaKnown RBP8.51□□□□□ -1.05
VNN3-205ENST00000417437 U2SURPO15042 1029 aaKnown RBP8.51□□□□□ -1.05
VNN3-205ENST00000417437 TM4SF1P30408 202 aa8.51□□□□□ -1.05
VNN3-205ENST00000417437 PRDM10Q9NQV6 1147 aa8.51□□□□□ -1.05
VNN3-205ENST00000417437 POLKQ9UBT6 870 aa8.51□□□□□ -1.05
VNN3-205ENST00000417437 DDX19BQ9UMR2 479 aa8.51□□□□□ -1.05
VNN3-205ENST00000417437 NCAPD2Q15021 1401 aa8.51□□□□□ -1.05
VNN3-205ENST00000417437 HAX1O00165 279 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 C21orf2O43822 256 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 TMPOP42166 694 aaKnown RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 EXOSC9Q06265 439 aaKnown RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 HDAC1Q13547 482 aaPredicted RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 CACNA1SQ13698 1873 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 NFIXQ14938 502 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 EAPPQ56P03 285 aaPredicted RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 L1TD1Q5T7N2 865 aaKnown RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 INTS5Q6P9B9 1019 aaKnown RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 DNAJC10Q8IXB1 793 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 PIP4P2Q8N4L2 257 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 BCL2L13Q9BXK5 485 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 CHMP4BQ9H444 224 aaKnown RBP8.5□□□□□ -1.05
VNN3-205ENST00000417437 SMC4Q9NTJ3 1288 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 NARFQ9UHQ1 456 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 TNNQ9UQP3 1299 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
VNN3-205ENST00000417437 KDM6AO15550 1401 aaPredicted RBP8.49□□□□□ -1.05
VNN3-205ENST00000417437 IQCA1LA6NCM1 817 aa8.49□□□□□ -1.05
VNN3-205ENST00000417437 PDE6BP35913 854 aa8.49□□□□□ -1.05
VNN3-205ENST00000417437 LBX1P52954 281 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms