RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 PDE4DQ08499 809 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 ZSCAN26Q16670 478 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 FOXD4L6Q3SYB3 417 aaPredicted RBP7.59□□□□□ -1.19
CCNT1-202ENST00000417344 FOXD4L3Q6VB84 417 aaPredicted RBP7.59□□□□□ -1.19
CCNT1-202ENST00000417344 SRLQ86TD4 932 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 GPATCH11Q8N954 259 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 TOMM22Q9NS69 142 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
CCNT1-202ENST00000417344 CLTCL1P53675 1640 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 A0A1B0GUL7 405 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 IPO8O15397 1037 aaKnown RBP7.59□□□□□ -1.19
CCNT1-202ENST00000417344 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 GPS2Q13227 327 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 CUL4AQ13619 759 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 ZSCAN25Q6NSZ9 544 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 METTL3Q86U44 580 aaKnown RBP7.59□□□□□ -1.19
CCNT1-202ENST00000417344 INTS4Q96HW7 963 aaKnown RBP7.59□□□□□ -1.19
CCNT1-202ENST00000417344 ATP10AO60312 1499 aa7.59□□□□□ -1.19
CCNT1-202ENST00000417344 NOS1P29475 1434 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 PATL2C9JE40 543 aaKnown RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 TK2O00142 265 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 SLU7O95391 586 aaKnown RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 PNMA6AP0CW24 399 aaPredicted RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 UBE2HP62256 183 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 EXOSC9Q06265 439 aaKnown RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 TTC22Q5TAA0 569 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 GIMAP6Q6P9H5 292 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 CASC1Q6TDU7 716 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 PXYLP1Q8TE99 480 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 TSR2Q969E8 191 aaKnown RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 SMARCE1Q969G3 411 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 ZNF777Q9ULD5 760 aaPredicted RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 CCDC171Q6TFL3 1326 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 WDR33Q9C0J8 1336 aaKnown RBP7.58□□□□□ -1.2
CCNT1-202ENST00000417344 ADCY10Q96PN6 1610 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 CADPSQ9ULU8 1353 aa7.58□□□□□ -1.2
CCNT1-202ENST00000417344 TTC31Q49AM3 519 aaPredicted RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 NOM1Q5C9Z4 860 aaKnown RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 POTEEQ6S8J3 1075 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 DRC7Q8IY82 874 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 DRC1Q96MC2 740 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 RABGEF1Q9UJ41 708 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 RRP15Q9Y3B9 282 aaKnown RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 SPAG9O60271 1321 aaKnown RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 RNF17Q9BXT8 1623 aaKnown RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 POLR3GO15318 223 aaPredicted RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 CCDC192P0DO97 292 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 ATP2B1P20020 1258 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 PSEN2P49810 448 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 NEK4P51957 841 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 ST5P78524 1137 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 PTPN14Q15678 1187 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 NYAP1Q6ZVC0 841 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.57□□□□□ -1.2
CCNT1-202ENST00000417344 PLEKHM2Q8IWE5 1019 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 FBXO18Q8NFZ0 1043 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 GOLGA5Q8TBA6 731 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 FAM200AQ8TCP9 573 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 DEF6Q9H4E7 631 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 PBRM1Q86U86 1689 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 ABCC11Q96J66 1382 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 PLEKHG2Q9H7P9 1386 aa7.57□□□□□ -1.2
CCNT1-202ENST00000417344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 TSGA10IPQ3SY00 556 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 DONSONQ9NYP3 566 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 NRBP1Q9UHY1 535 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 ATAD2Q6PL18 1390 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 RPAP1Q9BWH6 1393 aaPredicted RBP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 C9orf84Q5VXU9 1444 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 MED14O60244 1454 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 SHANK2Q9UPX8 1470 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 GPATCH8Q9UKJ3 1502 aaKnown RBP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 MYOM1P52179 1685 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 SHPRHQ149N8 1683 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 ZBTB7BO15156 539 aaPredicted RBP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 NPHP1O15259 732 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 SART3Q15020 963 aaKnown RBP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 CCDC91Q7Z6B0 441 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 CEP120Q8N960 986 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
CCNT1-202ENST00000417344 C1orf115Q9H7X2 142 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 FAM198AQ9UFP1 575 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 EXOC6BQ9Y2D4 811 aa7.56□□□□□ -1.2
CCNT1-202ENST00000417344 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 KIF1CO43896 1103 aaKnown RBP7.55□□□□□ -1.2
CCNT1-202ENST00000417344 ZRANB2O95218 330 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCNT1-202ENST00000417344 MAGEA9P43362 315 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 ZNF75DP51815 510 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 SATB1Q01826 763 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 ERCC6LQ2NKX8 1250 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 TMCO3Q6UWJ1 677 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 PLA2G4DQ86XP0 818 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 EGFL6Q8IUX8 553 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 IQUBQ8NA54 791 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 TATDN2Q93075 761 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 EYA1Q99502 592 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 CARD14Q9BXL6 1004 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms