RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 KIF3CO14782 793 aa19.97■□□□□ 0.79
UBXN4-203ENST00000416538 C9orf131Q5VYM1 1079 aa19.97■□□□□ 0.79
UBXN4-203ENST00000416538 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
UBXN4-203ENST00000416538 ANKRD36CQ5JPF3 1778 aa19.97■□□□□ 0.79
UBXN4-203ENST00000416538 SENP3-EIF4A1A0A087X0R7 540 aa19.96■□□□□ 0.79
UBXN4-203ENST00000416538 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
UBXN4-203ENST00000416538 RRP7AQ9Y3A4 280 aaKnown RBP19.96■□□□□ 0.79
UBXN4-203ENST00000416538 CNBD1Q8NA66 436 aa19.95■□□□□ 0.78
UBXN4-203ENST00000416538 PRKRIP1Q9H875 184 aaPredicted RBP19.95■□□□□ 0.78
UBXN4-203ENST00000416538 RIPK4P57078 832 aa19.94■□□□□ 0.78
UBXN4-203ENST00000416538 HLFQ16534 295 aa19.94■□□□□ 0.78
UBXN4-203ENST00000416538 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
UBXN4-203ENST00000416538 SETDB2Q96T68 719 aa19.94■□□□□ 0.78
UBXN4-203ENST00000416538 BRIP1Q9BX63 1249 aa19.94■□□□□ 0.78
UBXN4-203ENST00000416538 NFKBIEO00221 500 aa19.93■□□□□ 0.78
UBXN4-203ENST00000416538 TTLL6Q8N841 843 aa19.93■□□□□ 0.78
UBXN4-203ENST00000416538 PNNQ9H307 717 aaKnown RBP19.93■□□□□ 0.78
UBXN4-203ENST00000416538 RNF181Q9P0P0 153 aa19.93■□□□□ 0.78
UBXN4-203ENST00000416538 H0YIN7 160 aa19.92■□□□□ 0.78
UBXN4-203ENST00000416538 CLEC4GQ6UXB4 293 aa19.92■□□□□ 0.78
UBXN4-203ENST00000416538 TTLL7Q6ZT98 887 aa19.92■□□□□ 0.78
UBXN4-203ENST00000416538 NMRK2Q9NPI5 230 aa19.92■□□□□ 0.78
UBXN4-203ENST00000416538 LAMB2P55268 1798 aa19.91■□□□□ 0.78
UBXN4-203ENST00000416538 LRP10Q7Z4F1 713 aa19.91■□□□□ 0.78
UBXN4-203ENST00000416538 NPM2Q86SE8 214 aaKnown RBP19.91■□□□□ 0.78
UBXN4-203ENST00000416538 TSPYL4Q9UJ04 414 aa19.91■□□□□ 0.78
UBXN4-203ENST00000416538 ABCC12Q96J65 1359 aa19.91■□□□□ 0.78
UBXN4-203ENST00000416538 KCNA4P22459 653 aa19.9■□□□□ 0.78
UBXN4-203ENST00000416538 TRIM35Q9UPQ4 493 aa19.9■□□□□ 0.78
UBXN4-203ENST00000416538 NIP7Q9Y221 180 aaKnown RBP eCLIP19.9■□□□□ 0.78
UBXN4-203ENST00000416538 PDE6BP35913 854 aa19.89■□□□□ 0.77
UBXN4-203ENST00000416538 NGEFQ8N5V2 710 aa19.89■□□□□ 0.77
UBXN4-203ENST00000416538 ZNF622Q969S3 477 aaKnown RBP eCLIP19.89■□□□□ 0.773e-8■■□□□ 11.4
UBXN4-203ENST00000416538 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
UBXN4-203ENST00000416538 ZNF652Q9Y2D9 606 aa19.89■□□□□ 0.77
UBXN4-203ENST00000416538 MAP3K15Q6ZN16 1313 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 RGL2O15211 777 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 SRGNP10124 158 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 MYL6BP14649 208 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 ST5P78524 1137 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 PDIA6Q15084 440 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 NEUROD2Q15784 382 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 KRT24Q2M2I5 525 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 PROSER3Q2NL68 480 aa19.88■□□□□ 0.77
UBXN4-203ENST00000416538 NBPF5PQ86XG9 351 aaPredicted RBP19.88■□□□□ 0.77
UBXN4-203ENST00000416538 ZNF219Q9P2Y4 722 aaPredicted RBP19.88■□□□□ 0.77
UBXN4-203ENST00000416538 UBN2Q6ZU65 1347 aa19.87■□□□□ 0.77
UBXN4-203ENST00000416538 FAM177BA6PVY3 158 aa19.87■□□□□ 0.77
UBXN4-203ENST00000416538 RUNDC1Q96C34 613 aa19.87■□□□□ 0.77
UBXN4-203ENST00000416538 C21orf2O43822 256 aa19.86■□□□□ 0.77
UBXN4-203ENST00000416538 ANXA1P04083 346 aa19.86■□□□□ 0.77
UBXN4-203ENST00000416538 WDR43Q15061 677 aaKnown RBP eCLIP19.86■□□□□ 0.77
UBXN4-203ENST00000416538 ZBTB3Q9H5J0 574 aa19.86■□□□□ 0.77
UBXN4-203ENST00000416538 ERBB4Q15303 1308 aa19.85■□□□□ 0.77
UBXN4-203ENST00000416538 NPHP1O15259 732 aa19.85■□□□□ 0.77
UBXN4-203ENST00000416538 LMOD3Q0VAK6 560 aa19.85■□□□□ 0.77
UBXN4-203ENST00000416538 STYK1Q6J9G0 422 aa19.85■□□□□ 0.77
UBXN4-203ENST00000416538 PRPF40BQ6NWY9 871 aaKnown RBP19.85■□□□□ 0.77
UBXN4-203ENST00000416538 CEP350Q5VT06 3117 aa19.85■□□□□ 0.77
UBXN4-203ENST00000416538 WDR90Q96KV7 1748 aa19.85■□□□□ 0.77
UBXN4-203ENST00000416538 KLRG2A4D1S0 409 aaPredicted RBP19.84■□□□□ 0.77
UBXN4-203ENST00000416538 LMNB1P20700 586 aa19.84■□□□□ 0.77
UBXN4-203ENST00000416538 CCDC184Q52MB2 194 aa19.84■□□□□ 0.77
UBXN4-203ENST00000416538 PDZRN3Q9UPQ7 1066 aa19.84■□□□□ 0.77
UBXN4-203ENST00000416538 SNED1Q8TER0 1413 aa19.84■□□□□ 0.77
UBXN4-203ENST00000416538 ERVV-1B6SEH8 477 aa19.83■□□□□ 0.77
UBXN4-203ENST00000416538 GPTP24298 496 aa19.83■□□□□ 0.77
UBXN4-203ENST00000416538 NUTM1Q86Y26 1132 aa19.83■□□□□ 0.77
UBXN4-203ENST00000416538 MASTLQ96GX5 879 aa19.83■□□□□ 0.77
UBXN4-203ENST00000416538 BABAM1Q9NWV8 329 aa19.83■□□□□ 0.77
UBXN4-203ENST00000416538 RIC1Q4ADV7 1423 aa19.83■□□□□ 0.76
UBXN4-203ENST00000416538 IBTKQ9P2D0 1353 aaPredicted RBP19.83■□□□□ 0.76
UBXN4-203ENST00000416538 CHL1O00533 1208 aa19.82■□□□□ 0.76
UBXN4-203ENST00000416538 EIF2S2P20042 333 aaKnown RBP19.82■□□□□ 0.76
UBXN4-203ENST00000416538 C7orf43Q8WVR3 580 aa19.82■□□□□ 0.76
UBXN4-203ENST00000416538 DDX60Q8IY21 1712 aaKnown RBP19.82■□□□□ 0.76
UBXN4-203ENST00000416538 ZC3H4Q9UPT8 1303 aaKnown RBP19.81■□□□□ 0.76
UBXN4-203ENST00000416538 HSPA6P17066 643 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 OLFM4Q6UX06 510 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 KIF6Q6ZMV9 814 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 SLC51AQ86UW1 340 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 NECTIN2Q92692 538 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 CNKSR1Q969H4 720 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 TAF1P21675 1872 aa19.81■□□□□ 0.76
UBXN4-203ENST00000416538 LTBP3Q9NS15 1303 aa19.8■□□□□ 0.76
UBXN4-203ENST00000416538 ERFEQ4G0M1 354 aa19.8■□□□□ 0.76
UBXN4-203ENST00000416538 TPTE2Q6XPS3 522 aa19.8■□□□□ 0.76
UBXN4-203ENST00000416538 ZNF34Q8IZ26 560 aa19.8■□□□□ 0.76
UBXN4-203ENST00000416538 NTSR2O95665 410 aa19.79■□□□□ 0.76
UBXN4-203ENST00000416538 NPR1P16066 1061 aa19.79■□□□□ 0.76
UBXN4-203ENST00000416538 SUSD4Q5VX71 490 aa19.79■□□□□ 0.76
UBXN4-203ENST00000416538 GIGYF2Q6Y7W6 1299 aaKnown RBP19.79■□□□□ 0.76
UBXN4-203ENST00000416538 KDM2BQ8NHM5 1336 aa19.78■□□□□ 0.76
UBXN4-203ENST00000416538 COL4A5P29400 1685 aa19.78■□□□□ 0.76
UBXN4-203ENST00000416538 TOMM70O94826 608 aa19.78■□□□□ 0.76
UBXN4-203ENST00000416538 CRY2Q49AN0 593 aa19.78■□□□□ 0.76
UBXN4-203ENST00000416538 C3orf67Q6ZVT6 689 aa19.78■□□□□ 0.76
UBXN4-203ENST00000416538 RRAGCQ9HB90 399 aa19.78■□□□□ 0.76
UBXN4-203ENST00000416538 LAS1LQ9Y4W2 734 aaKnown RBP19.78■□□□□ 0.76
UBXN4-203ENST00000416538 APAF1O14727 1248 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms