RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 ATP2B4P23634 1241 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 GPC1P35052 558 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 MRPL14Q6P1L8 145 aaKnown RBP9.42□□□□□ -0.9
EPHA4-204ENST00000415749 CRIPAKQ8N1N5 446 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-204ENST00000415749 ABCA9Q8IUA7 1624 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 AKNAQ7Z591 1439 aa9.41□□□□□ -0.9
EPHA4-204ENST00000415749 TNS4Q8IZW8 715 aa9.41□□□□□ -0.9
EPHA4-204ENST00000415749 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
EPHA4-204ENST00000415749 PLEKHD1A6NEE1 506 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 CDK2AP1O14519 115 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 PRMT3O60678 531 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 CENPCQ03188 943 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 MTFR1Q15390 333 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 POLMQ9NP87 494 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-204ENST00000415749 SCHIP1Q9P0W5 487 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-204ENST00000415749 CHMP3Q9Y3E7 222 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 HRH3Q9Y5N1 445 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 FRMPD1Q5SYB0 1578 aa9.4□□□□□ -0.9
EPHA4-204ENST00000415749 FANCAO15360 1455 aa9.4□□□□□ -0.91
EPHA4-204ENST00000415749 FHOD3Q2V2M9 1422 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 IGFBP4P22692 258 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 SSFA2P28290 1259 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 EPHA4P54764 986 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 CCDC27Q2M243 656 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 C6orf118Q5T5N4 469 aa9.39□□□□□ -0.91
EPHA4-204ENST00000415749 ZSCAN10Q96SZ4 725 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-204ENST00000415749 INSM2Q96T92 566 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-204ENST00000415749 WEE1P30291 646 aa9.38□□□□□ -0.91
EPHA4-204ENST00000415749 RNF144AP50876 292 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-204ENST00000415749 FOXK2Q01167 660 aa9.38□□□□□ -0.91
EPHA4-204ENST00000415749 C1orf216Q8TAB5 229 aa9.38□□□□□ -0.91
EPHA4-204ENST00000415749 SCG3Q8WXD2 468 aaKnown RBP9.38□□□□□ -0.91
EPHA4-204ENST00000415749 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
EPHA4-204ENST00000415749 FHDC1Q9C0D6 1143 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-204ENST00000415749 CXXC1Q9P0U4 656 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-204ENST00000415749 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
EPHA4-204ENST00000415749 ARHGEF40Q8TER5 1519 aa9.37□□□□□ -0.91
EPHA4-204ENST00000415749 FOXO3O43524 673 aa9.37□□□□□ -0.91
EPHA4-204ENST00000415749 OCLNQ16625 522 aa9.37□□□□□ -0.91
EPHA4-204ENST00000415749 GNASQ5JWF2 1037 aa9.37□□□□□ -0.91
EPHA4-204ENST00000415749 TMEM214Q6NUQ4 689 aaKnown RBP9.37□□□□□ -0.91
EPHA4-204ENST00000415749 SLC9A9Q8IVB4 645 aa9.37□□□□□ -0.91
EPHA4-204ENST00000415749 TSPAN10Q9H1Z9 355 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-204ENST00000415749 ATAD2Q6PL18 1390 aa9.37□□□□□ -0.91
EPHA4-204ENST00000415749 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
EPHA4-204ENST00000415749 BMP1P13497 986 aa9.36□□□□□ -0.91
EPHA4-204ENST00000415749 PSMA6P60900 246 aaKnown RBP9.36□□□□□ -0.91
EPHA4-204ENST00000415749 PPARGC1BQ86YN6 1023 aaKnown RBP9.36□□□□□ -0.91
EPHA4-204ENST00000415749 VTI1AQ96AJ9 217 aa9.36□□□□□ -0.91
EPHA4-204ENST00000415749 PURBQ96QR8 312 aaKnown RBP9.36□□□□□ -0.91
EPHA4-204ENST00000415749 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.36□□□□□ -0.91
EPHA4-204ENST00000415749 SLAIN2Q9P270 581 aa9.36□□□□□ -0.91
EPHA4-204ENST00000415749 AMOTL2Q9Y2J4 779 aa9.36□□□□□ -0.91
EPHA4-204ENST00000415749 PTPRTO14522 1441 aa9.36□□□□□ -0.91
EPHA4-204ENST00000415749 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
EPHA4-204ENST00000415749 STRCQ7RTU9 1775 aa9.35□□□□□ -0.91
EPHA4-204ENST00000415749 UBAP1LF5GYI3 381 aa9.35□□□□□ -0.91
EPHA4-204ENST00000415749 LGR5O75473 907 aa9.35□□□□□ -0.91
EPHA4-204ENST00000415749 CTSOP43234 321 aaPredicted RBP9.35□□□□□ -0.91
EPHA4-204ENST00000415749 STAG2Q8N3U4 1231 aa9.35□□□□□ -0.91
EPHA4-204ENST00000415749 RHBDD1Q8TEB9 315 aa9.35□□□□□ -0.91
EPHA4-204ENST00000415749 NIFKQ9BYG3 293 aaKnown RBP9.35□□□□□ -0.91
EPHA4-204ENST00000415749 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
EPHA4-204ENST00000415749 MAGI2Q86UL8 1455 aa9.34□□□□□ -0.91
EPHA4-204ENST00000415749 TTLL8A6PVC2 850 aa9.34□□□□□ -0.91
EPHA4-204ENST00000415749 PTCD1O75127 700 aaKnown RBP9.34□□□□□ -0.91
EPHA4-204ENST00000415749 ARID4AP29374 1257 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-204ENST00000415749 SND1Q7KZF4 910 aaKnown RBP eCLIP9.34□□□□□ -0.91
EPHA4-204ENST00000415749 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.91
EPHA4-204ENST00000415749 CCER1Q8TC90 406 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-204ENST00000415749 CABP1Q9NZU7 370 aa9.34□□□□□ -0.91
EPHA4-204ENST00000415749 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
EPHA4-204ENST00000415749 CTTNBP2Q8WZ74 1663 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 ZFYVE16Q7Z3T8 1539 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 RNF217Q8TC41 542 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 COL26A1Q96A83 441 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 ATP13A2Q9NQ11 1180 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 AAASQ9NRG9 546 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 RICTORQ6R327 1708 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 ATP10AO60312 1499 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 TTC37Q6PGP7 1564 aa9.33□□□□□ -0.92
EPHA4-204ENST00000415749 EFCAB5A4FU69 1503 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 C21orf2O43822 256 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 TEAD4Q15561 434 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 TBCELQ5QJ74 424 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 PHLDB3Q6NSJ2 640 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 TAS1R3Q7RTX0 852 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 LYSMD3Q7Z3D4 306 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 ZFP42Q96MM3 310 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 PREX1Q8TCU6 1659 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 FER1L4A9Z1Z3 1794 aa9.32□□□□□ -0.92
EPHA4-204ENST00000415749 SCAPERQ9BY12 1400 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 SIGLEC1Q9BZZ2 1709 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 SERTM1A2A2V5 107 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 SPATA31C2B4DYI2 1134 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 ST8SIA5O15466 376 aa9.31□□□□□ -0.92
EPHA4-204ENST00000415749 FKBP5Q13451 457 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms