RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
CRAMP1-203ENST00000415022 BRCA1P38398 1863 aaKnown RBP13.72□□□□□ -0.21
CRAMP1-203ENST00000415022 CACNA1FO60840 1977 aa13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 MYL6BP14649 208 aa13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 TM4SF1P30408 202 aa13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 EXOSC9Q06265 439 aaKnown RBP13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 SLFN5Q08AF3 891 aa13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 GPBP1L1Q9HC44 474 aaPredicted RBP13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 ZNF330Q9Y3S2 320 aaPredicted RBP13.71□□□□□ -0.21
CRAMP1-203ENST00000415022 ATP10DQ9P241 1426 aa13.71□□□□□ -0.22
CRAMP1-203ENST00000415022 VAMP4O75379 141 aa13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 MMP10P09238 476 aa13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 RFC4P35249 363 aa13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 NFIXQ14938 502 aa13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 TBC1D9BQ66K14 1250 aa13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
CRAMP1-203ENST00000415022 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 G2E3Q7L622 706 aa13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 DZIP3Q86Y13 1208 aaKnown RBP13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 PHAXQ9H814 394 aaKnown RBP13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 CARMIL3Q8ND23 1372 aa13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
CRAMP1-203ENST00000415022 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
CRAMP1-203ENST00000415022 HOXB7P09629 217 aa13.68□□□□□ -0.22
CRAMP1-203ENST00000415022 HDGFL1Q5TGJ6 251 aa13.68□□□□□ -0.22
CRAMP1-203ENST00000415022 NLGN2Q8NFZ4 835 aa13.68□□□□□ -0.22
CRAMP1-203ENST00000415022 ERBB4Q15303 1308 aa13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 APLP1P51693 650 aa13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 DDX21Q9NR30 783 aaKnown RBP eCLIP13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 LAMB2P55268 1798 aa13.67□□□□□ -0.22
CRAMP1-203ENST00000415022 C10orf71Q711Q0 1435 aa13.66□□□□□ -0.22
CRAMP1-203ENST00000415022 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
CRAMP1-203ENST00000415022 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
CRAMP1-203ENST00000415022 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
CRAMP1-203ENST00000415022 TNS4Q8IZW8 715 aa13.66□□□□□ -0.22
CRAMP1-203ENST00000415022 ZBTB3Q9H5J0 574 aa13.66□□□□□ -0.22
CRAMP1-203ENST00000415022 MAP3K15Q6ZN16 1313 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 UBN2Q6ZU65 1347 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 ZPR1O75312 459 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 YBX3P16989 372 aaKnown RBP eCLIP13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 NLGN1Q8N2Q7 840 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 CCDC24Q8N4L8 307 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 PCDH10Q9P2E7 1040 aa13.65□□□□□ -0.22
CRAMP1-203ENST00000415022 DDX60Q8IY21 1712 aaKnown RBP13.64□□□□□ -0.23
CRAMP1-203ENST00000415022 TAF1P21675 1872 aa13.64□□□□□ -0.23
CRAMP1-203ENST00000415022 CACNA1SQ13698 1873 aa13.64□□□□□ -0.23
CRAMP1-203ENST00000415022 COL4A1P02462 1669 aa13.64□□□□□ -0.23
CRAMP1-203ENST00000415022 ADCY9O60503 1353 aa13.64□□□□□ -0.23
CRAMP1-203ENST00000415022 AIMP1Q12904 312 aaKnown RBP13.64□□□□□ -0.23
CRAMP1-203ENST00000415022 PXDNLA1KZ92 1463 aa13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 A0A087WZG4 1122 aa13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 E9PSI1 815 aa13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 HMGB2P26583 209 aaKnown RBP13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 ZNF34Q8IZ26 560 aa13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 KLHL34Q8N239 644 aa13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 DBF4Q9UBU7 674 aaPredicted RBP13.63□□□□□ -0.23
CRAMP1-203ENST00000415022 KCNA3P22001 575 aa13.62□□□□□ -0.23
CRAMP1-203ENST00000415022 MYH16Q9H6N6 1097 aa13.62□□□□□ -0.23
CRAMP1-203ENST00000415022 ABCC12Q96J65 1359 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 ERVV-1B6SEH8 477 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 KIF3CO14782 793 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 SERPINB2P05120 415 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 POLD1P28340 1107 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 PRR5LQ6MZQ0 368 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 GIGYF2Q6Y7W6 1299 aaKnown RBP13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 SYNE4Q8N205 404 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 ZNF526Q8TF50 670 aaPredicted RBP13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
CRAMP1-203ENST00000415022 GPTP24298 496 aa13.6□□□□□ -0.23
CRAMP1-203ENST00000415022 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
CRAMP1-203ENST00000415022 CLEC4GQ6UXB4 293 aa13.6□□□□□ -0.23
CRAMP1-203ENST00000415022 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
CRAMP1-203ENST00000415022 SSH1Q8WYL5 1049 aa13.6□□□□□ -0.23
CRAMP1-203ENST00000415022 SLC4A2P04920 1241 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 SUSD4Q5VX71 490 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 JMYQ8N9B5 988 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 WWC3Q9ULE0 1092 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 SLX4Q8IY92 1834 aa13.59□□□□□ -0.23
CRAMP1-203ENST00000415022 ARFGEF1Q9Y6D6 1849 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 FAM177BA6PVY3 158 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 RGL2O15211 777 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 NTSR2O95665 410 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 ANKRD13DQ6ZTN6 518 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 ISCA1Q9BUE6 129 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 BCL2L13Q9BXK5 485 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 NIP7Q9Y221 180 aaKnown RBP eCLIP13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 PARP3Q9Y6F1 533 aa13.58□□□□□ -0.24
CRAMP1-203ENST00000415022 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms