RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ARID5AQ03989 594 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 PPP2R5CQ13362 524 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 MAP3K12Q12852 859 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 C8orf76Q96K31 380 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 PKD2L1Q9P0L9 805 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 CNNM3Q8NE01 707 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 ACTN2P35609 894 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
SHANK3-202ENST00000414786 CALM1P0DP23 149 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 CALM2P0DP24 149 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 CALM3P0DP25 149 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 CATIPQ7Z7H3 387 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 GJA3Q9Y6H8 435 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 SMIM23A6NLE4 172 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 EEF2P13639 858 aaKnown RBP21.29■■□□□ 1
SHANK3-202ENST00000414786 CALML4Q96GE6 196 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 RIMBP2O15034 1052 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 ODF2LQ9ULJ1 636 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 F6X3S4 739 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 IRX5P78411 483 aaPredicted RBP21.29■■□□□ 1
SHANK3-202ENST00000414786 STX8Q9UNK0 236 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 GCC1Q96CN9 775 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 KAT14Q9H8E8 782 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 HAUS7Q99871 368 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 FERMT1Q9BQL6 677 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 CCDC175P0C221 793 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 DDX46Q7L014 1031 aaKnown RBP21.28■■□□□ 1
SHANK3-202ENST00000414786 CHD1LQ86WJ1 897 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 RAB34Q9BZG1 259 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 JADE2Q9NQC1 790 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 AKAP2Q9Y2D5 859 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 MAP3K11Q16584 847 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
SHANK3-202ENST00000414786 GSTA5Q7RTV2 222 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 PKNOX2Q96KN3 472 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 TPD52P55327 224 aaPredicted RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 CETN1Q12798 172 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 FLIIQ13045 1269 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 PRKG1Q13976 671 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 RASA3Q14644 834 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 U3KPZ7 1027 aaPredicted RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 HARSP12081 509 aaKnown RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 ZNF526Q8TF50 670 aaPredicted RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 MICU3Q86XE3 530 aa21.27■□□□□ 0.99
SHANK3-202ENST00000414786 FANCIQ9NVI1 1328 aa21.27■□□□□ 0.99
SHANK3-202ENST00000414786 STX6O43752 255 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PAFAH1B1P43034 410 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PPARDQ03181 441 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 CLSTN2Q9H4D0 955 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 TFIP11Q9UBB9 837 aaKnown RBP21.26■□□□□ 0.99
SHANK3-202ENST00000414786 GINS2Q9Y248 185 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PPP2R1AP30153 589 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 NOP9Q86U38 636 aaKnown RBP21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PFDN4Q9NQP4 134 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 GOLIM4O00461 696 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 HLA-DOAP06340 250 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 CCDC50Q8IVM0 306 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 MTERF4Q7Z6M4 381 aaKnown RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 USO1O60763 962 aaKnown RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 ST5P78524 1137 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 BBXQ8WY36 941 aaPredicted RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 MPHOSPH6Q99547 160 aaKnown RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 GDPD2Q9HCC8 539 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 C8orf37Q96NL8 207 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 TTC36A6NLP5 189 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 AFMP43652 599 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 TMEM67Q5HYA8 995 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 PPP2R5DQ14738 602 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 FOXO3O43524 673 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 HEATR3Q7Z4Q2 680 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 TAOK3Q9H2K8 898 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 A0A087WZG4 1122 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 EXOC5O00471 708 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 TBCAO75347 108 aaKnown RBP21.23■□□□□ 0.99
SHANK3-202ENST00000414786 TSHZ3Q63HK5 1081 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 FBF1Q8TES7 1133 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 SPOUT1Q5T280 376 aaKnown RBP21.23■□□□□ 0.99
SHANK3-202ENST00000414786 KRT13P13646 458 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 PTGS1P23219 599 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
SHANK3-202ENST00000414786 SFPQP23246 707 aaKnown RBP eCLIP21.22■□□□□ 0.99
SHANK3-202ENST00000414786 PTPN14Q15678 1187 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 GRPEL1Q9HAV7 217 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
SHANK3-202ENST00000414786 CHRNA2Q15822 529 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 TMC6Q7Z403 805 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 FGFR1OPO95684 399 aaKnown RBP21.22■□□□□ 0.99
SHANK3-202ENST00000414786 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 CCDC65Q8IXS2 484 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 ALS2CR12Q96Q35 445 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 PLCB3Q01970 1234 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 CTR9Q6PD62 1173 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 SLF2Q8IX21 1173 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 MRRFQ96E11 262 aaKnown RBP21.21■□□□□ 0.99
SHANK3-202ENST00000414786 TCP11L1Q9NUJ3 509 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms