RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 ARID5AQ03989 594 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 PPP2R5CQ13362 524 aa21.32■■□□□ 1
SHANK3-202ENST00000414786 MAP3K12Q12852 859 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 C8orf76Q96K31 380 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 PKD2L1Q9P0L9 805 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 CNNM3Q8NE01 707 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 ACTN2P35609 894 aa21.31■■□□□ 1
SHANK3-202ENST00000414786 TOP1P11387 765 aaKnown RBP21.3■■□□□ 1
SHANK3-202ENST00000414786 CALM1P0DP23 149 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 CALM2P0DP24 149 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 CALM3P0DP25 149 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 CATIPQ7Z7H3 387 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 GJA3Q9Y6H8 435 aa21.3■■□□□ 1
SHANK3-202ENST00000414786 SMIM23A6NLE4 172 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 EEF2P13639 858 aaKnown RBP21.29■■□□□ 1
SHANK3-202ENST00000414786 CALML4Q96GE6 196 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 RIMBP2O15034 1052 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 ODF2LQ9ULJ1 636 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 F6X3S4 739 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 IRX5P78411 483 aaPredicted RBP21.29■■□□□ 1
SHANK3-202ENST00000414786 STX8Q9UNK0 236 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 GCC1Q96CN9 775 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 KAT14Q9H8E8 782 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 HAUS7Q99871 368 aa21.29■■□□□ 1
SHANK3-202ENST00000414786 FERMT1Q9BQL6 677 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 CCDC175P0C221 793 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 DDX46Q7L014 1031 aaKnown RBP21.28■■□□□ 1
SHANK3-202ENST00000414786 CHD1LQ86WJ1 897 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 RAB34Q9BZG1 259 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 JADE2Q9NQC1 790 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 AKAP2Q9Y2D5 859 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 MAP3K11Q16584 847 aa21.28■■□□□ 1
SHANK3-202ENST00000414786 PNISRQ8TF01 805 aaKnown RBP21.28■■□□□ 1
SHANK3-202ENST00000414786 GSTA5Q7RTV2 222 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 PKNOX2Q96KN3 472 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 TPD52P55327 224 aaPredicted RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 CETN1Q12798 172 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 FLIIQ13045 1269 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 PRKG1Q13976 671 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 RASA3Q14644 834 aa21.27■■□□□ 1
SHANK3-202ENST00000414786 U3KPZ7 1027 aaPredicted RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 HARSP12081 509 aaKnown RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 ZNF526Q8TF50 670 aaPredicted RBP21.27■■□□□ 1
SHANK3-202ENST00000414786 MICU3Q86XE3 530 aa21.27■□□□□ 0.99
SHANK3-202ENST00000414786 FANCIQ9NVI1 1328 aa21.27■□□□□ 0.99
SHANK3-202ENST00000414786 STX6O43752 255 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PAFAH1B1P43034 410 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PPARDQ03181 441 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 CLSTN2Q9H4D0 955 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 TFIP11Q9UBB9 837 aaKnown RBP21.26■□□□□ 0.99
SHANK3-202ENST00000414786 GINS2Q9Y248 185 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PPP2R1AP30153 589 aa21.26■□□□□ 0.99
SHANK3-202ENST00000414786 NOP9Q86U38 636 aaKnown RBP21.26■□□□□ 0.99
SHANK3-202ENST00000414786 PFDN4Q9NQP4 134 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 GOLIM4O00461 696 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 HLA-DOAP06340 250 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 CCDC50Q8IVM0 306 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 MTERF4Q7Z6M4 381 aaKnown RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 USO1O60763 962 aaKnown RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 ST5P78524 1137 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 BBXQ8WY36 941 aaPredicted RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 MPHOSPH6Q99547 160 aaKnown RBP21.25■□□□□ 0.99
SHANK3-202ENST00000414786 SLC26A6Q9BXS9 759 aa21.25■□□□□ 0.99
SHANK3-202ENST00000414786 GDPD2Q9HCC8 539 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 C8orf37Q96NL8 207 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 TTC36A6NLP5 189 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 AFMP43652 599 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 TMEM67Q5HYA8 995 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 PPP2R5DQ14738 602 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 FOXO3O43524 673 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 HEATR3Q7Z4Q2 680 aa21.24■□□□□ 0.99
SHANK3-202ENST00000414786 TAOK3Q9H2K8 898 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 A0A087WZG4 1122 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 EXOC5O00471 708 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 TBCAO75347 108 aaKnown RBP21.23■□□□□ 0.99
SHANK3-202ENST00000414786 TSHZ3Q63HK5 1081 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 FBF1Q8TES7 1133 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 SPOUT1Q5T280 376 aaKnown RBP21.23■□□□□ 0.99
SHANK3-202ENST00000414786 KRT13P13646 458 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 PTGS1P23219 599 aa21.23■□□□□ 0.99
SHANK3-202ENST00000414786 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
SHANK3-202ENST00000414786 SFPQP23246 707 aaKnown RBP eCLIP21.22■□□□□ 0.99
SHANK3-202ENST00000414786 PTPN14Q15678 1187 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 GRPEL1Q9HAV7 217 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 TAF7Q15545 349 aaPredicted RBP21.22■□□□□ 0.99
SHANK3-202ENST00000414786 CHRNA2Q15822 529 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 TMC6Q7Z403 805 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 FGFR1OPO95684 399 aaKnown RBP21.22■□□□□ 0.99
SHANK3-202ENST00000414786 WAPLQ7Z5K2 1190 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 CCDC65Q8IXS2 484 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 ALS2CR12Q96Q35 445 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 RTEL1-TNFRSF6BF6WH68 1400 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 PLCB3Q01970 1234 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 DUSP27Q5VZP5 1158 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 CTR9Q6PD62 1173 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 SLF2Q8IX21 1173 aa21.22■□□□□ 0.99
SHANK3-202ENST00000414786 MRRFQ96E11 262 aaKnown RBP21.21■□□□□ 0.99
SHANK3-202ENST00000414786 TCP11L1Q9NUJ3 509 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms