RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 GPAMQ9HCL2 828 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
HMGB1P11-201ENST00000413899 H3BM21 787 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 NPR3P17342 541 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 UBAP2LQ14157 1087 aaKnown RBP7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 NAA30Q147X3 362 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 DBN1Q16643 649 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 EFHC2Q5JST6 749 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 BICDL1Q6ZP65 573 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 RIPOR1Q6ZS17 1223 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 SUSD3Q96L08 255 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 NUCKS1Q9H1E3 243 aaKnown RBP7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 RUBCNLQ9H714 662 aa7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 DNMT3AQ9Y6K1 912 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P11-201ENST00000413899 TGFBR3LH3BV60 316 aa7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 SERPINB4P48594 390 aa7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 SF3B2Q13435 895 aaKnown RBP7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 DGKZQ13574 1117 aa7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 KLRG1Q96E93 195 aa7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 ZNF837Q96EG3 531 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 KLK14Q9P0G3 267 aa7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 BCS1LQ9Y276 419 aa7.05□□□□□ -1.28
HMGB1P11-201ENST00000413899 BRD2P25440 801 aaKnown RBP7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 FIGNL1Q6PIW4 674 aa7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 AEBP1Q8IUX7 1158 aa7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 IFT43Q96FT9 208 aa7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 STIM2Q9P246 746 aa7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 DMGDHQ9UI17 866 aaKnown RBP7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
HMGB1P11-201ENST00000413899 TERTO14746 1132 aaKnown RBP7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 ICMTO60725 284 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 VSIG8P0DPA2 414 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 FKBP4Q02790 459 aaKnown RBP eCLIP7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 LRRC69Q6ZNQ3 347 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 ZNF280CQ8ND82 737 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 HSH2DQ96JZ2 352 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 ZCCHC2Q9C0B9 1178 aaKnown RBP7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 NEUROD4Q9HD90 331 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 NDFIP2Q9NV92 336 aa7.03□□□□□ -1.28
HMGB1P11-201ENST00000413899 FAM157BP0CG42 384 aa7.02□□□□□ -1.29
HMGB1P11-201ENST00000413899 SV2AQ7L0J3 742 aa7.02□□□□□ -1.29
HMGB1P11-201ENST00000413899 ETFBKMTQ8IXQ9 262 aa7.02□□□□□ -1.29
HMGB1P11-201ENST00000413899 ABTB2Q8N961 1025 aa7.02□□□□□ -1.29
HMGB1P11-201ENST00000413899 PCDHGC4Q9Y5F7 938 aa7.02□□□□□ -1.29
HMGB1P11-201ENST00000413899 GJA3Q9Y6H8 435 aa7.02□□□□□ -1.29
HMGB1P11-201ENST00000413899 SOWAHDA6NJG2 315 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 EFSO43281 561 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 MICAL2O94851 1124 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 ABL1P00519 1130 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 TYRO3Q06418 890 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 ZNF211Q13398 564 aaPredicted RBP7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 ECM1Q16610 540 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 FAM26DQ5JW98 314 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 BTLAQ7Z6A9 289 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 VWA5B2Q8N398 1253 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 CFHR5Q9BXR6 569 aa7.01□□□□□ -1.29
HMGB1P11-201ENST00000413899 ATXN7O15265 892 aaPredicted RBP7□□□□□ -1.29
HMGB1P11-201ENST00000413899 FAM13AO94988 1023 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 INPP5BP32019 993 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 KCNQ4P56696 695 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 MTMR3Q13615 1198 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 LAMC2Q13753 1193 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 TREML1Q86YW5 311 aa7□□□□□ -1.29
HMGB1P11-201ENST00000413899 GTPBP3Q969Y2 492 aaKnown RBP7□□□□□ -1.29
HMGB1P11-201ENST00000413899 ZBTB39O15060 712 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 BNIP3LO60238 219 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 MPSTP25325 297 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 VEGFBP49765 207 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 TNP2Q05952 138 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 NFX1Q12986 1120 aaKnown RBP6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 ALKBH2Q6NS38 261 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 SLC16A10Q8TF71 515 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 TRERF1Q96PN7 1200 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 C11orf16Q9NQ32 467 aa6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 ATXN7L1Q9ULK2 861 aaPredicted RBP6.99□□□□□ -1.29
HMGB1P11-201ENST00000413899 ZBTB7CA1YPR0 619 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 CDC14CA4D256 554 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 H3BRB1 525 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 OPLAHO14841 1288 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 IDH3AP50213 366 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 NOM1Q5C9Z4 860 aaKnown RBP6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 GLYCTKQ8IVS8 523 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 CEP63Q96MT8 703 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 TUT1Q9H6E5 874 aaKnown RBP6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 ANO2Q9NQ90 1003 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 PHF24Q9UPV7 400 aa6.98□□□□□ -1.29
HMGB1P11-201ENST00000413899 MAPTP10636 758 aaKnown RBP6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 ZAP70P43403 619 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 EIF1AXP47813 144 aaKnown RBP6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 ARSDP51689 593 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 ARHGAP4P98171 946 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 FAM182BQ5T319 152 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 IRF7Q92985 503 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 BRD7Q9NPI1 651 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 FAM13BQ9NYF5 915 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 HCN2Q9UL51 889 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 ERBB4Q15303 1308 aa6.97□□□□□ -1.29
HMGB1P11-201ENST00000413899 DCDC2BA2VCK2 349 aa6.96□□□□□ -1.3
HMGB1P11-201ENST00000413899 EPB42P16452 691 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms