RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 UBR3Q6ZT12 1888 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 KCNQ4P56696 695 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 HSP90AB3PQ58FF7 597 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 TSPYL6Q8N831 410 aa12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
RN7SKP3-201ENST00000411409 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 KIF6Q6ZMV9 814 aa12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 LRP10Q7Z4F1 713 aa12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 MTFR1LQ9H019 292 aa12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 PTPRCP08575 1304 aa12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
RN7SKP3-201ENST00000411409 IBTKQ9P2D0 1353 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 ELL2O00472 640 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 KRT24Q2M2I5 525 aa12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
RN7SKP3-201ENST00000411409 PTGER2P43116 358 aa12.09□□□□□ -0.47
RN7SKP3-201ENST00000411409 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
RN7SKP3-201ENST00000411409 PLBD2Q8NHP8 589 aa12.09□□□□□ -0.47
RN7SKP3-201ENST00000411409 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
RN7SKP3-201ENST00000411409 IPO8O15397 1037 aaKnown RBP12.08□□□□□ -0.48
RN7SKP3-201ENST00000411409 TRIM28Q13263 835 aaKnown RBP12.08□□□□□ -0.48
RN7SKP3-201ENST00000411409 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
RN7SKP3-201ENST00000411409 SYT17Q9BSW7 474 aa12.08□□□□□ -0.48
RN7SKP3-201ENST00000411409 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
RN7SKP3-201ENST00000411409 KIF16BQ96L93 1317 aa12.08□□□□□ -0.48
RN7SKP3-201ENST00000411409 CASZ1Q86V15 1759 aa12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 PHF14O94880 888 aa12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 CAMTA2O94983 1202 aa12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 GYS1P13807 737 aa12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 MYL6BP14649 208 aa12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 RARSP54136 660 aaKnown RBP12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 FHDC1Q9C0D6 1143 aaPredicted RBP12.07□□□□□ -0.48
RN7SKP3-201ENST00000411409 ATP10DQ9P241 1426 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 MS4A1P11836 297 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 HSP90B1P14625 803 aaKnown RBP12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 POLD1P28340 1107 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 FLIIQ13045 1269 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 XAGE3Q8WTP9 111 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 SSH1Q8WYL5 1049 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 ARXQ96QS3 562 aa12.06□□□□□ -0.48
RN7SKP3-201ENST00000411409 TM4SF1P30408 202 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 NEXNQ0ZGT2 675 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 PROSER3Q2NL68 480 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 USPL1Q5W0Q7 1092 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 SMC4Q9NTJ3 1288 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 PDZRN3Q9UPQ7 1066 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 TBC1D2BQ9UPU7 963 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 COL24A1Q17RW2 1714 aa12.05□□□□□ -0.48
RN7SKP3-201ENST00000411409 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 NYXQ9GZU5 481 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 ZNF330Q9Y3S2 320 aaPredicted RBP12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 CARMIL3Q8ND23 1372 aa12.04□□□□□ -0.48
RN7SKP3-201ENST00000411409 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 C4AP0C0L4 1744 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 TTLL7Q6ZT98 887 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 PPP1R42Q7Z4L9 355 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 METTL22Q9BUU2 404 aaPredicted RBP12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 PHAXQ9H814 394 aaKnown RBP12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 RCAN3Q9UKA8 241 aa12.03□□□□□ -0.48
RN7SKP3-201ENST00000411409 BCORQ6W2J9 1755 aa12.02□□□□□ -0.48
RN7SKP3-201ENST00000411409 PI4KAP2A4QPH2 592 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 AIMP1Q12904 312 aaKnown RBP12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 GPR162Q16538 588 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 TPTE2Q6XPS3 522 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 PI4KAP1Q8N8J0 262 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 ZNF784Q8NCA9 323 aaPredicted RBP12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 CCDC191Q8NCU4 936 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 DNAAF4Q8WXU2 420 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 ISCA1Q9BUE6 129 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 HDAC5Q9UQL6 1122 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
RN7SKP3-201ENST00000411409 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms