RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ATG3Q9NT62 314 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 RNF186Q9NXI6 227 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 SCN11AQ9UI33 1791 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 MON2Q7Z3U7 1717 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 NRXN2Q9P2S2 1712 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 HOXC9P31274 260 aa10.17□□□□□ -0.78
UBE2F-204ENST00000409953 SPOCK2Q92563 424 aa10.17□□□□□ -0.78
UBE2F-204ENST00000409953 PRDM6Q9NQX0 595 aa10.17□□□□□ -0.78
UBE2F-204ENST00000409953 MYH14Q7Z406 1995 aaKnown RBP10.16□□□□□ -0.78
UBE2F-204ENST00000409953 POTEFA5A3E0 1075 aa10.16□□□□□ -0.78
UBE2F-204ENST00000409953 CHRDL2Q6WN34 429 aa10.16□□□□□ -0.78
UBE2F-204ENST00000409953 SYNE4Q8N205 404 aa10.16□□□□□ -0.78
UBE2F-204ENST00000409953 OTUD5Q96G74 571 aa10.16□□□□□ -0.78
UBE2F-204ENST00000409953 HDAC9Q9UKV0 1011 aa10.16□□□□□ -0.78
UBE2F-204ENST00000409953 ZNF831Q5JPB2 1677 aa10.15□□□□□ -0.78
UBE2F-204ENST00000409953 AMPHP49418 695 aa10.15□□□□□ -0.78
UBE2F-204ENST00000409953 NFIXQ14938 502 aa10.15□□□□□ -0.78
UBE2F-204ENST00000409953 ZNF408Q9H9D4 720 aa10.15□□□□□ -0.78
UBE2F-204ENST00000409953 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.79
UBE2F-204ENST00000409953 EVC2Q86UK5 1308 aa10.14□□□□□ -0.79
UBE2F-204ENST00000409953 RANBP2P49792 3224 aaKnown RBP10.14□□□□□ -0.79
UBE2F-204ENST00000409953 SERPINB2P05120 415 aa10.14□□□□□ -0.79
UBE2F-204ENST00000409953 LMOD1P29536 600 aaPredicted RBP10.14□□□□□ -0.79
UBE2F-204ENST00000409953 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
UBE2F-204ENST00000409953 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
UBE2F-204ENST00000409953 USPL1Q5W0Q7 1092 aa10.14□□□□□ -0.79
UBE2F-204ENST00000409953 FBXO46Q6PJ61 603 aaPredicted RBP10.14□□□□□ -0.79
UBE2F-204ENST00000409953 GPC2Q8N158 579 aa10.14□□□□□ -0.79
UBE2F-204ENST00000409953 SBNO2Q9Y2G9 1366 aa10.14□□□□□ -0.79
UBE2F-204ENST00000409953 COL11A2P13942 1736 aaPredicted RBP10.13□□□□□ -0.79
UBE2F-204ENST00000409953 H0YGN5 161 aa10.13□□□□□ -0.79
UBE2F-204ENST00000409953 ZPR1O75312 459 aa10.13□□□□□ -0.79
UBE2F-204ENST00000409953 COL9A1P20849 921 aa10.13□□□□□ -0.79
UBE2F-204ENST00000409953 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
UBE2F-204ENST00000409953 KIF23Q02241 960 aaPredicted RBP10.13□□□□□ -0.79
UBE2F-204ENST00000409953 STAC3Q96MF2 364 aa10.13□□□□□ -0.79
UBE2F-204ENST00000409953 ZNF277Q9NRM2 450 aaPredicted RBP10.13□□□□□ -0.79
UBE2F-204ENST00000409953 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
UBE2F-204ENST00000409953 BRCA2P51587 3418 aa10.12□□□□□ -0.79
UBE2F-204ENST00000409953 AKAP11Q9UKA4 1901 aa10.12□□□□□ -0.79
UBE2F-204ENST00000409953 FAM155AB1AL88 458 aaPredicted RBP10.12□□□□□ -0.79
UBE2F-204ENST00000409953 EPS15P42566 896 aa10.12□□□□□ -0.79
UBE2F-204ENST00000409953 FXR2P51116 673 aaKnown RBP eCLIP10.12□□□□□ -0.79
UBE2F-204ENST00000409953 HUNKP57058 714 aa10.12□□□□□ -0.79
UBE2F-204ENST00000409953 FZD9O00144 591 aa10.11□□□□□ -0.79
UBE2F-204ENST00000409953 PRPF40BQ6NWY9 871 aaKnown RBP10.11□□□□□ -0.79
UBE2F-204ENST00000409953 USP50Q70EL3 339 aaPredicted RBP10.11□□□□□ -0.79
UBE2F-204ENST00000409953 ZNF296Q8WUU4 475 aaPredicted RBP10.11□□□□□ -0.79
UBE2F-204ENST00000409953 GLIS2Q9BZE0 524 aaPredicted RBP10.11□□□□□ -0.79
UBE2F-204ENST00000409953 GJA3Q9Y6H8 435 aa10.11□□□□□ -0.79
UBE2F-204ENST00000409953 ANKRD31Q8N7Z5 1873 aa10.1□□□□□ -0.79
UBE2F-204ENST00000409953 SLX4Q8IY92 1834 aa10.1□□□□□ -0.79
UBE2F-204ENST00000409953 SCNN1DP51172 638 aa10.1□□□□□ -0.79
UBE2F-204ENST00000409953 PDZRN3Q9UPQ7 1066 aa10.1□□□□□ -0.79
UBE2F-204ENST00000409953 PAPPA2Q9BXP8 1791 aa10.1□□□□□ -0.79
UBE2F-204ENST00000409953 CACNA1SQ13698 1873 aa10.1□□□□□ -0.79
UBE2F-204ENST00000409953 KIAA0100Q14667 2235 aaKnown RBP10.1□□□□□ -0.79
UBE2F-204ENST00000409953 BCORQ6W2J9 1755 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 VCANP13611 3396 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 PDE6BP35913 854 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 PLA2G5P39877 138 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 FKBP4Q02790 459 aaKnown RBP eCLIP10.09□□□□□ -0.79
UBE2F-204ENST00000409953 CCDC93Q567U6 631 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 RGMBQ6NW40 437 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 CCDC24Q8N4L8 307 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 CNKSR1Q969H4 720 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 RTL1A6NKG5 1358 aa10.09□□□□□ -0.79
UBE2F-204ENST00000409953 RBBP6Q7Z6E9 1792 aaKnown RBP10.09□□□□□ -0.79
UBE2F-204ENST00000409953 EN2P19622 333 aaPredicted RBP10.08□□□□□ -0.8
UBE2F-204ENST00000409953 FBLN1P23142 703 aa10.08□□□□□ -0.8
UBE2F-204ENST00000409953 INTS3Q68E01 1043 aaKnown RBP10.08□□□□□ -0.8
UBE2F-204ENST00000409953 CSRNP1Q96S65 589 aa10.08□□□□□ -0.8
UBE2F-204ENST00000409953 IARSP41252 1262 aaKnown RBP10.07□□□□□ -0.8
UBE2F-204ENST00000409953 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
UBE2F-204ENST00000409953 BRIP1Q9BX63 1249 aa10.07□□□□□ -0.8
UBE2F-204ENST00000409953 RAPGEFL1Q9UHV5 662 aa10.07□□□□□ -0.8
UBE2F-204ENST00000409953 EDC4Q6P2E9 1401 aaKnown RBP10.07□□□□□ -0.8
UBE2F-204ENST00000409953 ARFGEF2Q9Y6D5 1785 aa10.06□□□□□ -0.8
UBE2F-204ENST00000409953 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
UBE2F-204ENST00000409953 EIF6P56537 245 aaKnown RBP10.06□□□□□ -0.8
UBE2F-204ENST00000409953 STYK1Q6J9G0 422 aa10.06□□□□□ -0.8
UBE2F-204ENST00000409953 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.06□□□□□ -0.8
UBE2F-204ENST00000409953 FAM122AQ96E09 287 aa10.06□□□□□ -0.8
UBE2F-204ENST00000409953 LRCH3Q96II8 777 aa10.06□□□□□ -0.8
UBE2F-204ENST00000409953 SPG7Q9UQ90 795 aa10.06□□□□□ -0.8
UBE2F-204ENST00000409953 HTTP42858 3142 aa10.05□□□□□ -0.8
UBE2F-204ENST00000409953 LAMA3Q16787 3333 aa10.05□□□□□ -0.8
UBE2F-204ENST00000409953 SOX1O00570 391 aaPredicted RBP10.05□□□□□ -0.8
UBE2F-204ENST00000409953 ZNF157P51786 506 aaPredicted RBP10.05□□□□□ -0.8
UBE2F-204ENST00000409953 NUBP1P53384 320 aa10.05□□□□□ -0.8
UBE2F-204ENST00000409953 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
UBE2F-204ENST00000409953 JDP2Q8WYK2 163 aa10.05□□□□□ -0.8
UBE2F-204ENST00000409953 BCL2L12Q9HB09 334 aa10.05□□□□□ -0.8
UBE2F-204ENST00000409953 NARFQ9UHQ1 456 aa10.05□□□□□ -0.8
UBE2F-204ENST00000409953 PTCD1O75127 700 aaKnown RBP10.04□□□□□ -0.8
UBE2F-204ENST00000409953 TBC1D8O95759 1140 aa10.04□□□□□ -0.8
UBE2F-204ENST00000409953 PHKG2P15735 406 aa10.04□□□□□ -0.8
UBE2F-204ENST00000409953 C7orf43Q8WVR3 580 aa10.04□□□□□ -0.8
UBE2F-204ENST00000409953 ADARB2Q9NS39 739 aaKnown RBP10.04□□□□□ -0.8
UBE2F-204ENST00000409953 STXBP5LQ9Y2K9 1186 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms