RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 NECTIN1Q15223 517 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 CNPY2Q9Y2B0 182 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 GLRX3O76003 335 aaKnown RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 LGR6Q9HBX8 967 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 ZNF142P52746 1687 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 NPHP4O75161 1426 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 MAP4K4O95819 1239 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 PTH1RQ03431 593 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 NBPF6Q5VWK0 638 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 NOL8Q76FK4 1167 aaKnown RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 RNF214Q8ND24 703 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 NBPF4Q96M43 638 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 SPTLC3Q9NUV7 552 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 MTMR6Q9Y217 621 aa9.43□□□□□ -0.9
EPHA4-203ENST00000409938 R3HCC1Q9Y3T6 440 aaKnown RBP9.43□□□□□ -0.9
EPHA4-203ENST00000409938 PI4KAP2A4QPH2 592 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 DYNC1I1O14576 645 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 ALDH1L1O75891 902 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 GLIPR1L2Q4G1C9 344 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 SASS6Q6UVJ0 657 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 PI4KAP1Q8N8J0 262 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 CHMP4AQ9BY43 222 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 MYH15Q9Y2K3 1946 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 SCN11AQ9UI33 1791 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 KCNQ3O43525 872 aa9.42□□□□□ -0.9
EPHA4-203ENST00000409938 KCNA6P17658 529 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 ADCK5Q3MIX3 580 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 AKAP4Q5JQC9 854 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 GTF2F1P35269 517 aaKnown RBP eCLIP9.41□□□□□ -0.9
EPHA4-203ENST00000409938 CEBPAP49715 358 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-203ENST00000409938 USHBP1Q8N6Y0 703 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 KAZALD1Q96I82 304 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 MAP7D2Q96T17 732 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 SH2B1Q9NRF2 756 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-203ENST00000409938 MST1RQ04912 1400 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 CWC27Q6UX04 472 aaKnown RBP9.41□□□□□ -0.9
EPHA4-203ENST00000409938 ABTB2Q8N961 1025 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-203ENST00000409938 ECHDC1Q9NTX5 307 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 MED23Q9ULK4 1368 aa9.41□□□□□ -0.9
EPHA4-203ENST00000409938 CCDC171Q6TFL3 1326 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 UQCRHLA0A096LP55 91 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 UQCRHP07919 91 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 MAP4K1Q92918 833 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 ABCC6O95255 1503 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 AP5Z1O43299 807 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 KDM4AO75164 1064 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 CASTP20810 708 aaKnown RBP9.4□□□□□ -0.9
EPHA4-203ENST00000409938 KIAA2012Q0VF49 1180 aa9.4□□□□□ -0.9
EPHA4-203ENST00000409938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-203ENST00000409938 CPA1P15085 419 aa9.4□□□□□ -0.91
EPHA4-203ENST00000409938 THEMISQ8N1K5 641 aaPredicted RBP9.4□□□□□ -0.91
EPHA4-203ENST00000409938 EVI5LQ96CN4 794 aa9.4□□□□□ -0.91
EPHA4-203ENST00000409938 DBF4Q9UBU7 674 aaPredicted RBP9.4□□□□□ -0.91
EPHA4-203ENST00000409938 GLI3P10071 1580 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 ELP1O95163 1332 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 RGPD5Q99666 1765 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
EPHA4-203ENST00000409938 PDIA4P13667 645 aaKnown RBP9.39□□□□□ -0.91
EPHA4-203ENST00000409938 GJB2P29033 226 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 TSGA10IPQ3SY00 556 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 NUTM2GQ5VZR2 741 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 ERC1Q8IUD2 1116 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 RUFY2Q8WXA3 655 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 SMC3Q9UQE7 1217 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 ATP6V1DQ9Y5K8 247 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 SASH1O94885 1247 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 ME3Q16798 604 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 KSR2Q6VAB6 950 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 MYRIPQ8NFW9 859 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 PDRG1Q9NUG6 133 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 LAMA4Q16363 1823 aa9.39□□□□□ -0.91
EPHA4-203ENST00000409938 RNMTO43148 476 aaKnown RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 ADCY5O95622 1261 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 COL9A3Q14050 684 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 HCLS1P14317 486 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 PDIA6Q15084 440 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 PROSER3Q2NL68 480 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 RBM43Q6ZSC3 357 aaKnown RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 USP25Q9UHP3 1055 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 TPCN1Q9ULQ1 816 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 COL15A1P39059 1388 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 BTBD11A6QL63 1104 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 EIF2S2P20042 333 aaKnown RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 DNM1Q05193 864 aaKnown RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 CREB3L3Q68CJ9 461 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 CLASRPQ8N2M8 674 aaKnown RBP9.38□□□□□ -0.91
EPHA4-203ENST00000409938 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 MAP3K2Q9Y2U5 619 aa9.38□□□□□ -0.91
EPHA4-203ENST00000409938 SETD1BQ9UPS6 1966 aaKnown RBP9.37□□□□□ -0.91
EPHA4-203ENST00000409938 FOXD4L6Q3SYB3 417 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-203ENST00000409938 AMOTQ4VCS5 1084 aa9.37□□□□□ -0.91
EPHA4-203ENST00000409938 PRPF40BQ6NWY9 871 aaKnown RBP9.37□□□□□ -0.91
EPHA4-203ENST00000409938 FOXD4L3Q6VB84 417 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-203ENST00000409938 MTERF4Q7Z6M4 381 aaKnown RBP9.37□□□□□ -0.91
EPHA4-203ENST00000409938 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms