RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
GYPC-203ENST00000409836 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
GYPC-203ENST00000409836 TBC1D2BQ9UPU7 963 aa18.14■□□□□ 0.49
GYPC-203ENST00000409836 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
GYPC-203ENST00000409836 RIC1Q4ADV7 1423 aa18.14■□□□□ 0.49
GYPC-203ENST00000409836 COL11A2P13942 1736 aaPredicted RBP18.13■□□□□ 0.49
GYPC-203ENST00000409836 GOLGB1Q14789 3259 aaKnown RBP18.13■□□□□ 0.49
GYPC-203ENST00000409836 N4BP2Q86UW6 1770 aaPredicted RBP18.13■□□□□ 0.49
GYPC-203ENST00000409836 NPM2Q86SE8 214 aaKnown RBP18.13■□□□□ 0.49
GYPC-203ENST00000409836 MYH16Q9H6N6 1097 aa18.13■□□□□ 0.49
GYPC-203ENST00000409836 ARFGEF1Q9Y6D6 1849 aa18.12■□□□□ 0.49
GYPC-203ENST00000409836 CHPF2Q9P2E5 772 aa18.12■□□□□ 0.49
GYPC-203ENST00000409836 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
GYPC-203ENST00000409836 EIF2S2P20042 333 aaKnown RBP18.11■□□□□ 0.49
GYPC-203ENST00000409836 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
GYPC-203ENST00000409836 TSPYL6Q8N831 410 aa18.11■□□□□ 0.49
GYPC-203ENST00000409836 ZNF330Q9Y3S2 320 aaPredicted RBP18.11■□□□□ 0.49
GYPC-203ENST00000409836 LAMB2P55268 1798 aa18.1■□□□□ 0.49
GYPC-203ENST00000409836 SENP3-EIF4A1A0A087X0R7 540 aa18.1■□□□□ 0.49
GYPC-203ENST00000409836 MYL6BP14649 208 aa18.1■□□□□ 0.49
GYPC-203ENST00000409836 TTLL7Q6ZT98 887 aa18.1■□□□□ 0.49
GYPC-203ENST00000409836 HYPKQ9NX55 129 aa18.1■□□□□ 0.49
GYPC-203ENST00000409836 E9PSI1 815 aa18.09■□□□□ 0.49
GYPC-203ENST00000409836 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
GYPC-203ENST00000409836 TWISTNBQ3B726 338 aaPredicted RBP18.09■□□□□ 0.49
GYPC-203ENST00000409836 GIGYF2Q6Y7W6 1299 aaKnown RBP18.09■□□□□ 0.49
GYPC-203ENST00000409836 KIF6Q6ZMV9 814 aa18.09■□□□□ 0.49
GYPC-203ENST00000409836 TRMT2AQ8IZ69 625 aaKnown RBP18.09■□□□□ 0.49
GYPC-203ENST00000409836 TGFB2P61812 414 aa18.08■□□□□ 0.48
GYPC-203ENST00000409836 CCDC30Q5VVM6 783 aa18.08■□□□□ 0.48
GYPC-203ENST00000409836 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
GYPC-203ENST00000409836 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
GYPC-203ENST00000409836 TNRC6CQ9HCJ0 1690 aaKnown RBP18.08■□□□□ 0.48
GYPC-203ENST00000409836 UTRNP46939 3433 aa18.08■□□□□ 0.48
GYPC-203ENST00000409836 ANXA1P04083 346 aa18.07■□□□□ 0.48
GYPC-203ENST00000409836 SERPINB2P05120 415 aa18.07■□□□□ 0.48
GYPC-203ENST00000409836 SLFN5Q08AF3 891 aa18.07■□□□□ 0.48
GYPC-203ENST00000409836 HLFQ16534 295 aa18.07■□□□□ 0.48
GYPC-203ENST00000409836 RNF123Q5XPI4 1314 aa18.06■□□□□ 0.48
GYPC-203ENST00000409836 ZNF34Q8IZ26 560 aa18.06■□□□□ 0.48
GYPC-203ENST00000409836 XAGE3Q8WTP9 111 aa18.06■□□□□ 0.48
GYPC-203ENST00000409836 SETDB2Q96T68 719 aa18.06■□□□□ 0.48
GYPC-203ENST00000409836 UBN2Q6ZU65 1347 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 VAMP4O75379 141 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
GYPC-203ENST00000409836 PRR5LQ6MZQ0 368 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 COPS6Q7L5N1 327 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 PLBD2Q8NHP8 589 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 NECTIN2Q92692 538 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 CHD4Q14839 1912 aa18.05■□□□□ 0.48
GYPC-203ENST00000409836 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
GYPC-203ENST00000409836 ZBTB3Q9H5J0 574 aa18.04■□□□□ 0.48
GYPC-203ENST00000409836 NIP7Q9Y221 180 aaKnown RBP eCLIP18.04■□□□□ 0.48
GYPC-203ENST00000409836 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
GYPC-203ENST00000409836 HSP90AB3PQ58FF7 597 aa18.03■□□□□ 0.48
GYPC-203ENST00000409836 CNBD1Q8NA66 436 aa18.03■□□□□ 0.48
GYPC-203ENST00000409836 ZNF428Q96B54 188 aa18.03■□□□□ 0.48
GYPC-203ENST00000409836 PDZRN3Q9UPQ7 1066 aa18.03■□□□□ 0.48
GYPC-203ENST00000409836 DDX60Q8IY21 1712 aaKnown RBP18.03■□□□□ 0.48
GYPC-203ENST00000409836 KLRG2A4D1S0 409 aaPredicted RBP18.02■□□□□ 0.48
GYPC-203ENST00000409836 ZBED9Q6R2W3 1325 aa18.01■□□□□ 0.47
GYPC-203ENST00000409836 CT47B1P0C2W7 299 aaPredicted RBP18.01■□□□□ 0.47
GYPC-203ENST00000409836 TRIM28Q13263 835 aaKnown RBP18.01■□□□□ 0.47
GYPC-203ENST00000409836 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
GYPC-203ENST00000409836 BRIP1Q9BX63 1249 aa18.01■□□□□ 0.47
GYPC-203ENST00000409836 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
GYPC-203ENST00000409836 ADCY9O60503 1353 aa18.01■□□□□ 0.47
GYPC-203ENST00000409836 ABCC12Q96J65 1359 aa18.01■□□□□ 0.47
GYPC-203ENST00000409836 NTSR2O95665 410 aa18■□□□□ 0.47
GYPC-203ENST00000409836 KCNA3P22001 575 aa18■□□□□ 0.47
GYPC-203ENST00000409836 TCIRG1Q13488 830 aa18■□□□□ 0.47
GYPC-203ENST00000409836 BICDL1Q6ZP65 573 aa18■□□□□ 0.47
GYPC-203ENST00000409836 NYXQ9GZU5 481 aa18■□□□□ 0.47
GYPC-203ENST00000409836 PHAXQ9H814 394 aaKnown RBP18■□□□□ 0.47
GYPC-203ENST00000409836 NBPF5PQ86XG9 351 aaPredicted RBP17.99■□□□□ 0.47
GYPC-203ENST00000409836 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
GYPC-203ENST00000409836 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
GYPC-203ENST00000409836 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
GYPC-203ENST00000409836 ST5P78524 1137 aa17.98■□□□□ 0.47
GYPC-203ENST00000409836 AIMP1Q12904 312 aaKnown RBP17.98■□□□□ 0.47
GYPC-203ENST00000409836 TPTE2Q6XPS3 522 aa17.98■□□□□ 0.47
GYPC-203ENST00000409836 NLRP10Q86W26 655 aa17.98■□□□□ 0.47
GYPC-203ENST00000409836 CACNA1SQ13698 1873 aa17.97■□□□□ 0.47
GYPC-203ENST00000409836 DDX58O95786 925 aaKnown RBP17.97■□□□□ 0.47
GYPC-203ENST00000409836 DPEP1P16444 411 aa17.97■□□□□ 0.47
GYPC-203ENST00000409836 PDE6BP35913 854 aa17.97■□□□□ 0.47
GYPC-203ENST00000409836 FLIIQ13045 1269 aa17.97■□□□□ 0.47
GYPC-203ENST00000409836 CRY2Q49AN0 593 aa17.97■□□□□ 0.47
GYPC-203ENST00000409836 MYH3P11055 1940 aa17.96■□□□□ 0.47
GYPC-203ENST00000409836 YBX3P16989 372 aaKnown RBP eCLIP17.96■□□□□ 0.476e-12■■□□□ 12.7
GYPC-203ENST00000409836 HNRNPUQ00839 825 aaKnown RBP eCLIP17.96■□□□□ 0.47
GYPC-203ENST00000409836 SUSD4Q5VX71 490 aa17.96■□□□□ 0.47
GYPC-203ENST00000409836 FER1L6Q2WGJ9 1857 aa17.95■□□□□ 0.46
GYPC-203ENST00000409836 SLC4A2P04920 1241 aa17.95■□□□□ 0.46
GYPC-203ENST00000409836 GPTP24298 496 aa17.95■□□□□ 0.46
GYPC-203ENST00000409836 KSR2Q6VAB6 950 aa17.95■□□□□ 0.46
GYPC-203ENST00000409836 PPP1R42Q7Z4L9 355 aa17.95■□□□□ 0.46
GYPC-203ENST00000409836 SLX4Q8IY92 1834 aa17.94■□□□□ 0.46
GYPC-203ENST00000409836 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
GYPC-203ENST00000409836 SRGNP10124 158 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms