RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
CHMP3-205ENST00000409810 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
CHMP3-205ENST00000409810 ERVV-1B6SEH8 477 aa14.08□□□□□ -0.16
CHMP3-205ENST00000409810 GOLGA2Q08379 1002 aa14.08□□□□□ -0.16
CHMP3-205ENST00000409810 TBC1D9BQ66K14 1250 aa14.08□□□□□ -0.16
CHMP3-205ENST00000409810 ANKRD36CQ5JPF3 1778 aa14.08□□□□□ -0.16
CHMP3-205ENST00000409810 NPHP1O15259 732 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 SERPINB2P05120 415 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 PDIA6Q15084 440 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 CCDC30Q5VVM6 783 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 HYPKQ9NX55 129 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 CHPF2Q9P2E5 772 aa14.07□□□□□ -0.16
CHMP3-205ENST00000409810 N4BP2Q86UW6 1770 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-205ENST00000409810 ELL2O00472 640 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-205ENST00000409810 TGFB2P61812 414 aa14.06□□□□□ -0.16
CHMP3-205ENST00000409810 PROSER3Q2NL68 480 aa14.06□□□□□ -0.16
CHMP3-205ENST00000409810 TWISTNBQ3B726 338 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-205ENST00000409810 TTLL7Q6ZT98 887 aa14.06□□□□□ -0.16
CHMP3-205ENST00000409810 C8orf58Q8NAV2 365 aa14.06□□□□□ -0.16
CHMP3-205ENST00000409810 ZNF521Q96K83 1311 aa14.06□□□□□ -0.16
CHMP3-205ENST00000409810 ATP10DQ9P241 1426 aa14.06□□□□□ -0.16
CHMP3-205ENST00000409810 KIAA1551Q9HCM1 1747 aa14.05□□□□□ -0.16
CHMP3-205ENST00000409810 ANXA1P04083 346 aa14.05□□□□□ -0.16
CHMP3-205ENST00000409810 HSP90AB3PQ58FF7 597 aa14.05□□□□□ -0.16
CHMP3-205ENST00000409810 LRP10Q7Z4F1 713 aa14.05□□□□□ -0.16
CHMP3-205ENST00000409810 STK31Q9BXU1 1019 aa14.05□□□□□ -0.16
CHMP3-205ENST00000409810 ZBTB3Q9H5J0 574 aa14.05□□□□□ -0.16
CHMP3-205ENST00000409810 NIP7Q9Y221 180 aaKnown RBP eCLIP14.05□□□□□ -0.16
CHMP3-205ENST00000409810 BRCA1P38398 1863 aaKnown RBP14.05□□□□□ -0.16
CHMP3-205ENST00000409810 E9PSI1 815 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 ST5P78524 1137 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
CHMP3-205ENST00000409810 HLFQ16534 295 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 COPS6Q7L5N1 327 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 TSPYL6Q8N831 410 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 CNBD1Q8NA66 436 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 DLEC1Q9Y238 1755 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 ARFGEF2Q9Y6D5 1785 aa14.04□□□□□ -0.16
CHMP3-205ENST00000409810 CHD4Q14839 1912 aa14.03□□□□□ -0.16
CHMP3-205ENST00000409810 GPR162Q16538 588 aa14.03□□□□□ -0.16
CHMP3-205ENST00000409810 GIGYF2Q6Y7W6 1299 aaKnown RBP14.03□□□□□ -0.16
CHMP3-205ENST00000409810 NBPF5PQ86XG9 351 aaPredicted RBP14.03□□□□□ -0.16
CHMP3-205ENST00000409810 PELP1Q8IZL8 1130 aaKnown RBP14.03□□□□□ -0.16
CHMP3-205ENST00000409810 NYXQ9GZU5 481 aa14.03□□□□□ -0.16
CHMP3-205ENST00000409810 PDZRN3Q9UPQ7 1066 aa14.03□□□□□ -0.16
CHMP3-205ENST00000409810 ANKRD31Q8N7Z5 1873 aa14.03□□□□□ -0.16
CHMP3-205ENST00000409810 GOLGB1Q14789 3259 aaKnown RBP14.03□□□□□ -0.16
CHMP3-205ENST00000409810 IBTKQ9P2D0 1353 aaPredicted RBP14.02□□□□□ -0.17
CHMP3-205ENST00000409810 EXOSC9Q06265 439 aaKnown RBP14.02□□□□□ -0.17
CHMP3-205ENST00000409810 TPTE2Q6XPS3 522 aa14.02□□□□□ -0.17
CHMP3-205ENST00000409810 PLBD2Q8NHP8 589 aa14.02□□□□□ -0.17
CHMP3-205ENST00000409810 DDX58O95786 925 aaKnown RBP14.01□□□□□ -0.17
CHMP3-205ENST00000409810 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
CHMP3-205ENST00000409810 PRR5LQ6MZQ0 368 aa14.01□□□□□ -0.17
CHMP3-205ENST00000409810 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
CHMP3-205ENST00000409810 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
CHMP3-205ENST00000409810 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
CHMP3-205ENST00000409810 GRIN3BO60391 1043 aa14□□□□□ -0.17
CHMP3-205ENST00000409810 DPEP1P16444 411 aa14□□□□□ -0.17
CHMP3-205ENST00000409810 GTF2E1P29083 439 aaPredicted RBP14□□□□□ -0.17
CHMP3-205ENST00000409810 PDE6BP35913 854 aa14□□□□□ -0.17
CHMP3-205ENST00000409810 PPP1R42Q7Z4L9 355 aa14□□□□□ -0.17
CHMP3-205ENST00000409810 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
CHMP3-205ENST00000409810 VAMP4O75379 141 aa13.99□□□□□ -0.17
CHMP3-205ENST00000409810 GPTP24298 496 aa13.99□□□□□ -0.17
CHMP3-205ENST00000409810 RIC3Q7Z5B4 369 aa13.99□□□□□ -0.17
CHMP3-205ENST00000409810 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
CHMP3-205ENST00000409810 UTRNP46939 3433 aa13.99□□□□□ -0.17
CHMP3-205ENST00000409810 COL11A2P13942 1736 aaPredicted RBP13.98□□□□□ -0.17
CHMP3-205ENST00000409810 RNF123Q5XPI4 1314 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 UBN2Q6ZU65 1347 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 CACNA1SQ13698 1873 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 FAM177BA6PVY3 158 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 H0YIN7 160 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 SLFN5Q08AF3 891 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 TCIRG1Q13488 830 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 PIM2Q9P1W9 311 aa13.98□□□□□ -0.17
CHMP3-205ENST00000409810 SLC4A2P04920 1241 aa13.97□□□□□ -0.17
CHMP3-205ENST00000409810 HNRNPUQ00839 825 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHMP3-205ENST00000409810 C2CD5Q86YS7 1000 aa13.97□□□□□ -0.17
CHMP3-205ENST00000409810 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
CHMP3-205ENST00000409810 BCS1LQ9Y276 419 aa13.97□□□□□ -0.17
CHMP3-205ENST00000409810 CHRNA5P30532 468 aa13.96□□□□□ -0.17
CHMP3-205ENST00000409810 DALRD3Q5D0E6 543 aaKnown RBP13.96□□□□□ -0.17
CHMP3-205ENST00000409810 SUSD4Q5VX71 490 aa13.96□□□□□ -0.17
CHMP3-205ENST00000409810 ZNF428Q96B54 188 aa13.96□□□□□ -0.17
CHMP3-205ENST00000409810 UTP14AQ9BVJ6 771 aaKnown RBP13.96□□□□□ -0.17
CHMP3-205ENST00000409810 RIC1Q4ADV7 1423 aa13.96□□□□□ -0.18
CHMP3-205ENST00000409810 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
CHMP3-205ENST00000409810 NTSR2O95665 410 aa13.95□□□□□ -0.18
CHMP3-205ENST00000409810 YBX3P16989 372 aaKnown RBP eCLIP13.95□□□□□ -0.18
CHMP3-205ENST00000409810 FLIIQ13045 1269 aa13.95□□□□□ -0.18
CHMP3-205ENST00000409810 NLRP10Q86W26 655 aa13.95□□□□□ -0.18
CHMP3-205ENST00000409810 CCDC24Q8N4L8 307 aa13.95□□□□□ -0.18
CHMP3-205ENST00000409810 WWC3Q9ULE0 1092 aa13.95□□□□□ -0.18
CHMP3-205ENST00000409810 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms