RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 NPHP1O15259 732 aa25.69■■□□□ 1.7
TSPAN4-209ENST00000409543 ST5P78524 1137 aa25.69■■□□□ 1.7
TSPAN4-209ENST00000409543 CCDC24Q8N4L8 307 aa25.69■■□□□ 1.7
TSPAN4-209ENST00000409543 GPBP1L1Q9HC44 474 aaPredicted RBP25.69■■□□□ 1.7
TSPAN4-209ENST00000409543 ERVV-1B6SEH8 477 aa25.68■■□□□ 1.7
TSPAN4-209ENST00000409543 CHL1O00533 1208 aa25.68■■□□□ 1.7
TSPAN4-209ENST00000409543 HLFQ16534 295 aa25.68■■□□□ 1.7
TSPAN4-209ENST00000409543 NGEFQ8N5V2 710 aa25.68■■□□□ 1.7
TSPAN4-209ENST00000409543 MYL6BP14649 208 aa25.67■■□□□ 1.7
TSPAN4-209ENST00000409543 C1QTNF8P60827 252 aa25.67■■□□□ 1.7
TSPAN4-209ENST00000409543 NBPF5PQ86XG9 351 aaPredicted RBP25.67■■□□□ 1.7
TSPAN4-209ENST00000409543 NIP7Q9Y221 180 aaKnown RBP eCLIP25.67■■□□□ 1.7
TSPAN4-209ENST00000409543 ZNF526Q8TF50 670 aaPredicted RBP25.66■■□□□ 1.7
TSPAN4-209ENST00000409543 MAP3K15Q6ZN16 1313 aa25.65■■□□□ 1.7
TSPAN4-209ENST00000409543 TPTE2Q6XPS3 522 aa25.65■■□□□ 1.7
TSPAN4-209ENST00000409543 KIF6Q6ZMV9 814 aa25.65■■□□□ 1.7
TSPAN4-209ENST00000409543 C9orf131Q5VYM1 1079 aa25.64■■□□□ 1.7
TSPAN4-209ENST00000409543 TTLL7Q6ZT98 887 aa25.64■■□□□ 1.7
TSPAN4-209ENST00000409543 ZNF622Q969S3 477 aaKnown RBP eCLIP25.64■■□□□ 1.7
TSPAN4-209ENST00000409543 EIF2S2P20042 333 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-209ENST00000409543 LAS1LQ9Y4W2 734 aaKnown RBP25.63■■□□□ 1.69
TSPAN4-209ENST00000409543 APAF1O14727 1248 aa25.62■■□□□ 1.69
TSPAN4-209ENST00000409543 PDIA6Q15084 440 aa25.62■■□□□ 1.69
TSPAN4-209ENST00000409543 COL11A2P13942 1736 aaPredicted RBP25.62■■□□□ 1.69
TSPAN4-209ENST00000409543 SRGNP10124 158 aa25.61■■□□□ 1.69
TSPAN4-209ENST00000409543 STYK1Q6J9G0 422 aa25.61■■□□□ 1.69
TSPAN4-209ENST00000409543 LRP10Q7Z4F1 713 aa25.61■■□□□ 1.69
TSPAN4-209ENST00000409543 NUP98P52948 1817 aa25.6■■□□□ 1.69
TSPAN4-209ENST00000409543 CFAP44Q96MT7 982 aa25.6■■□□□ 1.69
TSPAN4-209ENST00000409543 KLRG2A4D1S0 409 aaPredicted RBP25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 CCDC184Q52MB2 194 aa25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 CNKSR1Q969H4 720 aa25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 MASTLQ96GX5 879 aa25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 ZBTB3Q9H5J0 574 aa25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 RNF181Q9P0P0 153 aa25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 SBF1O95248 1867 aa25.59■■□□□ 1.69
TSPAN4-209ENST00000409543 FAM177BA6PVY3 158 aa25.58■■□□□ 1.69
TSPAN4-209ENST00000409543 KRT24Q2M2I5 525 aa25.58■■□□□ 1.69
TSPAN4-209ENST00000409543 RASSF7Q02833 373 aa25.57■■□□□ 1.68
TSPAN4-209ENST00000409543 PROSER3Q2NL68 480 aa25.57■■□□□ 1.68
TSPAN4-209ENST00000409543 GIGYF2Q6Y7W6 1299 aaKnown RBP25.57■■□□□ 1.68
TSPAN4-209ENST00000409543 NYXQ9GZU5 481 aa25.57■■□□□ 1.68
TSPAN4-209ENST00000409543 GTF2E1P29083 439 aaPredicted RBP25.56■■□□□ 1.68
TSPAN4-209ENST00000409543 CALD1Q05682 793 aaKnown RBP25.56■■□□□ 1.68
TSPAN4-209ENST00000409543 ANP32CO43423 234 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 C21orf2O43822 256 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 ANXA1P04083 346 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 HOXB7P09629 217 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 ZNF853P0CG23 659 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 NPR1P16066 1061 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 LMNB1P20700 586 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 ZNF34Q8IZ26 560 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 NECTIN2Q92692 538 aa25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 DDX21Q9NR30 783 aaKnown RBP eCLIP25.55■■□□□ 1.68
TSPAN4-209ENST00000409543 NFKBIEO00221 500 aa25.54■■□□□ 1.68
TSPAN4-209ENST00000409543 GPTP24298 496 aa25.54■■□□□ 1.68
TSPAN4-209ENST00000409543 PRPF40BQ6NWY9 871 aaKnown RBP25.54■■□□□ 1.68
TSPAN4-209ENST00000409543 IBTKQ9P2D0 1353 aaPredicted RBP25.54■■□□□ 1.68
TSPAN4-209ENST00000409543 KIF3CO14782 793 aa25.53■■□□□ 1.68
TSPAN4-209ENST00000409543 MBIPQ9NS73 344 aa25.53■■□□□ 1.68
TSPAN4-209ENST00000409543 IFT57Q9NWB7 429 aa25.53■■□□□ 1.68
TSPAN4-209ENST00000409543 ZNF219Q9P2Y4 722 aaPredicted RBP25.53■■□□□ 1.68
TSPAN4-209ENST00000409543 UBN2Q6ZU65 1347 aa25.53■■□□□ 1.68
TSPAN4-209ENST00000409543 SLX4Q8IY92 1834 aa25.53■■□□□ 1.68
TSPAN4-209ENST00000409543 ARFGEF2Q9Y6D5 1785 aa25.52■■□□□ 1.68
TSPAN4-209ENST00000409543 PRELPP51888 382 aa25.52■■□□□ 1.68
TSPAN4-209ENST00000409543 SUSD4Q5VX71 490 aa25.52■■□□□ 1.68
TSPAN4-209ENST00000409543 COPS6Q7L5N1 327 aa25.52■■□□□ 1.68
TSPAN4-209ENST00000409543 ZC3H4Q9UPT8 1303 aaKnown RBP25.52■■□□□ 1.68
TSPAN4-209ENST00000409543 GNAI1P63096 354 aa25.51■■□□□ 1.67
TSPAN4-209ENST00000409543 HDGFL1Q5TGJ6 251 aa25.51■■□□□ 1.67
TSPAN4-209ENST00000409543 NUTM1Q86Y26 1132 aa25.51■■□□□ 1.67
TSPAN4-209ENST00000409543 ERFEQ4G0M1 354 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 PARP10Q53GL7 1025 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 SOGA3Q5TF21 947 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 DUSP27Q5VZP5 1158 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 XAGE3Q8WTP9 111 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 ABCC12Q96J65 1359 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 MRS2Q9HD23 443 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 CHPF2Q9P2E5 772 aa25.5■■□□□ 1.67
TSPAN4-209ENST00000409543 FER1L6Q2WGJ9 1857 aa25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 KDM2BQ8NHM5 1336 aa25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 AIMP1Q12904 312 aaKnown RBP25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 PPP1R42Q7Z4L9 355 aa25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 C7orf43Q8WVR3 580 aa25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 DBF4Q9UBU7 674 aaPredicted RBP25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 CACNA1SQ13698 1873 aa25.49■■□□□ 1.67
TSPAN4-209ENST00000409543 RIC1Q4ADV7 1423 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 LTBP3Q9NS15 1303 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 SENP3-EIF4A1A0A087X0R7 540 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 NTSR2O95665 410 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 CRY2Q49AN0 593 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 HSP90AB3PQ58FF7 597 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 NMRK2Q9NPI5 230 aa25.48■■□□□ 1.67
TSPAN4-209ENST00000409543 ALDH1B1P30837 517 aa25.47■■□□□ 1.67
TSPAN4-209ENST00000409543 CCDC88AQ3V6T2 1871 aa25.47■■□□□ 1.67
TSPAN4-209ENST00000409543 TNRC6CQ9HCJ0 1690 aaKnown RBP25.46■■□□□ 1.67
TSPAN4-209ENST00000409543 TAOK3Q9H2K8 898 aa25.46■■□□□ 1.67
TSPAN4-209ENST00000409543 CCDC27Q2M243 656 aa25.45■■□□□ 1.66
TSPAN4-209ENST00000409543 TCIRG1Q13488 830 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms