RNA–Protein interactions for RNA: ENST00000409387.5

SLC3A1-205, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-205ENST00000409387 FMNL3Q8IVF7 1028 aa13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 SMC5Q8IY18 1101 aa13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 POLKQ9UBT6 870 aa13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 MLH3Q9UHC1 1453 aa13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 NOM1Q5C9Z4 860 aaKnown RBP13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 ELOA2Q8IYF1 753 aaPredicted RBP13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 THOC1Q96FV9 657 aaKnown RBP13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 ZKSCAN5Q9Y2L8 839 aa13.78□□□□□ -0.2
SLC3A1-205ENST00000409387 MAP3K4Q9Y6R4 1608 aa13.77□□□□□ -0.2
SLC3A1-205ENST00000409387 LMTK2Q8IWU2 1503 aa13.77□□□□□ -0.2
SLC3A1-205ENST00000409387 TBC1D25Q3MII6 688 aa13.77□□□□□ -0.21
SLC3A1-205ENST00000409387 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.21
SLC3A1-205ENST00000409387 C10orf67Q8IYJ2 551 aa13.77□□□□□ -0.21
SLC3A1-205ENST00000409387 FAXDC2Q96IV6 333 aa13.77□□□□□ -0.21
SLC3A1-205ENST00000409387 UNCXA6NJT0 531 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 ZNF662Q6ZS27 426 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 MYLK4Q86YV6 388 aaPredicted RBP13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 EFCAB13Q8IY85 973 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 FBXW7Q969H0 707 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 NRBP1Q9UHY1 535 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 DDX41Q9UJV9 622 aaKnown RBP13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 NEURL4Q96JN8 1562 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 SHTN1A0MZ66 631 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 CBFA2T2O43439 604 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 CCDC175P0C221 793 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 NBPF7P0C2Y1 421 aaPredicted RBP13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 CCDC178Q5BJE1 867 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 RSPH1Q8WYR4 309 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 THRAP3Q9Y2W1 955 aaKnown RBP13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 COMMD10Q9Y6G5 202 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 RNF123Q5XPI4 1314 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 SIGLEC1Q9BZZ2 1709 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 KIAA1210Q9ULL0 1709 aa13.76□□□□□ -0.21
SLC3A1-205ENST00000409387 TRAK2O60296 914 aa13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 HDLBPQ00341 1268 aaKnown RBP13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 RBM12BQ8IXT5 1001 aaKnown RBP13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 RABL2BQ9UNT1 228 aa13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 DIP2CQ9Y2E4 1556 aa13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 VDRP11473 427 aa13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 SLC5A9Q2M3M2 681 aa13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 CCDC70Q6NSX1 233 aa13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 DRAXINQ8NBI3 349 aaPredicted RBP13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 GNL3LQ9NVN8 582 aaKnown RBP13.75□□□□□ -0.21
SLC3A1-205ENST00000409387 RIMBP3CA6NJZ7 1639 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 RIMBP3BA6NNM3 1639 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 RIMBP3Q9UFD9 1639 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 HTATSF1O43719 755 aaKnown RBP13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 RAPGEF3O95398 923 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 MCM4P33991 863 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 GJC2Q5T442 439 aaPredicted RBP13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 HSCBQ8IWL3 235 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 NEO1Q92859 1461 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 KCNV1Q6PIU1 500 aa13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 PRPF38AQ8NAV1 312 aaKnown RBP13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.74□□□□□ -0.21
SLC3A1-205ENST00000409387 NPATQ14207 1427 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 RPS6KA3P51812 740 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 ANKRD13BQ86YJ7 626 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 KRT222Q8N1A0 295 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 MYOM1P52179 1685 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 KAT6BQ8WYB5 2073 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 CFAP69A5D8W1 941 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 HMMRO75330 724 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 KCNA2P16389 499 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 ZNF394Q53GI3 561 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 AKAP2Q9Y2D5 859 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 CAMSAP1Q5T5Y3 1602 aa13.73□□□□□ -0.21
SLC3A1-205ENST00000409387 ABCC3O15438 1527 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 ADGRB3O60242 1522 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 PER1O15534 1290 aaPredicted RBP13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 C21orf2O43822 256 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 IRF5Q13568 498 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 E2F4Q16254 413 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 TAF4BQ92750 862 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 PMM1Q92871 262 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 CCDC34Q96HJ3 373 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 CRACR2AQ9BSW2 395 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 SENP3-EIF4A1A0A087X0R7 540 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 XBP1P17861 261 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 RABEP1Q15276 862 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 STAG2Q8N3U4 1231 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 SPOCK3Q9BQ16 436 aa13.72□□□□□ -0.21
SLC3A1-205ENST00000409387 MYOM2P54296 1465 aa13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 PPLO60437 1756 aa13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 TPM1P09493 284 aa13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 HHATQ5VTY9 493 aa13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 YIPF2Q9BWQ6 316 aa13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 ZNF446Q9NWS9 450 aa13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 SCAF11Q99590 1463 aaKnown RBP13.71□□□□□ -0.21
SLC3A1-205ENST00000409387 PARD3Q8TEW0 1356 aa13.7□□□□□ -0.22
SLC3A1-205ENST00000409387 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
SLC3A1-205ENST00000409387 TSPYL2Q9H2G4 693 aaPredicted RBP13.7□□□□□ -0.22
SLC3A1-205ENST00000409387 BIN2Q9UBW5 565 aaPredicted RBP13.7□□□□□ -0.22
SLC3A1-205ENST00000409387 CTNNA3Q9UI47 895 aa13.7□□□□□ -0.22
SLC3A1-205ENST00000409387 NEBLO76041 1014 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms