RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 PROSER3Q2NL68 480 aa23.28■■□□□ 1.32
PDLIM2-206ENST00000409141 HDGFL1Q5TGJ6 251 aa23.28■■□□□ 1.32
PDLIM2-206ENST00000409141 ERVV-1B6SEH8 477 aa23.27■■□□□ 1.32
PDLIM2-206ENST00000409141 MAP3K15Q6ZN16 1313 aa23.27■■□□□ 1.31
PDLIM2-206ENST00000409141 ELL2O00472 640 aaPredicted RBP23.26■■□□□ 1.31
PDLIM2-206ENST00000409141 NPHP1O15259 732 aa23.26■■□□□ 1.31
PDLIM2-206ENST00000409141 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
PDLIM2-206ENST00000409141 DDX21Q9NR30 783 aaKnown RBP eCLIP23.26■■□□□ 1.31
PDLIM2-206ENST00000409141 NIP7Q9Y221 180 aaKnown RBP eCLIP23.26■■□□□ 1.31
PDLIM2-206ENST00000409141 LRP10Q7Z4F1 713 aa23.25■■□□□ 1.31
PDLIM2-206ENST00000409141 IL16Q14005 1332 aa23.25■■□□□ 1.31
PDLIM2-206ENST00000409141 BCORQ6W2J9 1755 aa23.25■■□□□ 1.31
PDLIM2-206ENST00000409141 CCER2I3L3R5 266 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 CHRNA5P30532 468 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 PRR5LQ6MZQ0 368 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 TSR2Q969E8 191 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 CHPF2Q9P2E5 772 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 AFDNP55196 1824 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 KCNA3P22001 575 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 YY1P25490 414 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 AIMP1Q12904 312 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 NBPF5PQ86XG9 351 aaPredicted RBP23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 WDR63Q8IWG1 891 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 CCDC24Q8N4L8 307 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 CNBD1Q8NA66 436 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 C8orf58Q8NAV2 365 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 PIM2Q9P1W9 311 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 BCS1LQ9Y276 419 aa23.24■■□□□ 1.31
PDLIM2-206ENST00000409141 N4BP2Q86UW6 1770 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-206ENST00000409141 COPS6Q7L5N1 327 aa23.23■■□□□ 1.31
PDLIM2-206ENST00000409141 DBF4Q9UBU7 674 aaPredicted RBP23.23■■□□□ 1.31
PDLIM2-206ENST00000409141 NRXN2Q9P2S2 1712 aa23.22■■□□□ 1.31
PDLIM2-206ENST00000409141 XAGE3Q8WTP9 111 aa23.22■■□□□ 1.31
PDLIM2-206ENST00000409141 BRIP1Q9BX63 1249 aa23.22■■□□□ 1.31
PDLIM2-206ENST00000409141 FAM177BA6PVY3 158 aa23.21■■□□□ 1.31
PDLIM2-206ENST00000409141 ST5P78524 1137 aa23.21■■□□□ 1.31
PDLIM2-206ENST00000409141 TPTE2Q6XPS3 522 aa23.21■■□□□ 1.31
PDLIM2-206ENST00000409141 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
PDLIM2-206ENST00000409141 KIAA1551Q9HCM1 1747 aa23.21■■□□□ 1.31
PDLIM2-206ENST00000409141 C2CD5Q86YS7 1000 aa23.2■■□□□ 1.3
PDLIM2-206ENST00000409141 H0YIN7 160 aa23.19■■□□□ 1.3
PDLIM2-206ENST00000409141 PDE6BP35913 854 aa23.19■■□□□ 1.3
PDLIM2-206ENST00000409141 CHMP4AQ9BY43 222 aa23.19■■□□□ 1.3
PDLIM2-206ENST00000409141 HYPKQ9NX55 129 aa23.19■■□□□ 1.3
PDLIM2-206ENST00000409141 GPTP24298 496 aa23.18■■□□□ 1.3
PDLIM2-206ENST00000409141 DALRD3Q5D0E6 543 aaKnown RBP23.18■■□□□ 1.3
PDLIM2-206ENST00000409141 TSPYL6Q8N831 410 aa23.18■■□□□ 1.3
PDLIM2-206ENST00000409141 GTF2E1P29083 439 aaPredicted RBP23.17■■□□□ 1.3
PDLIM2-206ENST00000409141 ZNF34Q8IZ26 560 aa23.17■■□□□ 1.3
PDLIM2-206ENST00000409141 PDZRN3Q9UPQ7 1066 aa23.17■■□□□ 1.3
PDLIM2-206ENST00000409141 ATP10DQ9P241 1426 aa23.16■■□□□ 1.3
PDLIM2-206ENST00000409141 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
PDLIM2-206ENST00000409141 NYXQ9GZU5 481 aa23.16■■□□□ 1.3
PDLIM2-206ENST00000409141 NUP98P52948 1817 aa23.15■■□□□ 1.3
PDLIM2-206ENST00000409141 UTRNP46939 3433 aa23.15■■□□□ 1.3
PDLIM2-206ENST00000409141 GOLGB1Q14789 3259 aaKnown RBP23.15■■□□□ 1.3
PDLIM2-206ENST00000409141 TWISTNBQ3B726 338 aaPredicted RBP23.15■■□□□ 1.3
PDLIM2-206ENST00000409141 FANCIQ9NVI1 1328 aa23.15■■□□□ 1.3
PDLIM2-206ENST00000409141 HSP90AB3PQ58FF7 597 aa23.14■■□□□ 1.29
PDLIM2-206ENST00000409141 ANKRD13DQ6ZTN6 518 aa23.14■■□□□ 1.29
PDLIM2-206ENST00000409141 MIER1Q8N108 512 aa23.14■■□□□ 1.29
PDLIM2-206ENST00000409141 ZNF622Q969S3 477 aaKnown RBP eCLIP23.14■■□□□ 1.29
PDLIM2-206ENST00000409141 UBN2Q6ZU65 1347 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 PARP10Q53GL7 1025 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 SUSD4Q5VX71 490 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 ARHGAP27Q6ZUM4 889 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 TTLL6Q8N841 843 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 PLBD2Q8NHP8 589 aa23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 SPINK5Q9NQ38 1064 aaPredicted RBP23.13■■□□□ 1.29
PDLIM2-206ENST00000409141 PPP1R42Q7Z4L9 355 aa23.12■■□□□ 1.29
PDLIM2-206ENST00000409141 MYH16Q9H6N6 1097 aa23.12■■□□□ 1.29
PDLIM2-206ENST00000409141 PHAXQ9H814 394 aaKnown RBP23.12■■□□□ 1.29
PDLIM2-206ENST00000409141 CHD4Q14839 1912 aa23.12■■□□□ 1.29
PDLIM2-206ENST00000409141 TCIRG1Q13488 830 aa23.11■■□□□ 1.29
PDLIM2-206ENST00000409141 NUTM1Q86Y26 1132 aa23.11■■□□□ 1.29
PDLIM2-206ENST00000409141 STK31Q9BXU1 1019 aa23.11■■□□□ 1.29
PDLIM2-206ENST00000409141 BRCA1P38398 1863 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-206ENST00000409141 ANKRD31Q8N7Z5 1873 aa23.1■■□□□ 1.29
PDLIM2-206ENST00000409141 SRGNP10124 158 aa23.1■■□□□ 1.29
PDLIM2-206ENST00000409141 EXOSC9Q06265 439 aaKnown RBP23.1■■□□□ 1.29
PDLIM2-206ENST00000409141 ERFEQ4G0M1 354 aa23.1■■□□□ 1.29
PDLIM2-206ENST00000409141 ZNF521Q96K83 1311 aa23.09■■□□□ 1.29
PDLIM2-206ENST00000409141 TCERG1O14776 1098 aaKnown RBP23.09■■□□□ 1.29
PDLIM2-206ENST00000409141 MASTLQ96GX5 879 aa23.09■■□□□ 1.29
PDLIM2-206ENST00000409141 UTP14AQ9BVJ6 771 aaKnown RBP23.09■■□□□ 1.29
PDLIM2-206ENST00000409141 NTSR2O95665 410 aa23.08■■□□□ 1.29
PDLIM2-206ENST00000409141 STYK1Q6J9G0 422 aa23.08■■□□□ 1.29
PDLIM2-206ENST00000409141 RIC3Q7Z5B4 369 aa23.08■■□□□ 1.29
PDLIM2-206ENST00000409141 IBTKQ9P2D0 1353 aaPredicted RBP23.08■■□□□ 1.28
PDLIM2-206ENST00000409141 KLRG2A4D1S0 409 aaPredicted RBP23.07■■□□□ 1.28
PDLIM2-206ENST00000409141 NLRP10Q86W26 655 aa23.07■■□□□ 1.28
PDLIM2-206ENST00000409141 CNKSR1Q969H4 720 aa23.07■■□□□ 1.28
PDLIM2-206ENST00000409141 VAMP4O75379 141 aa23.06■■□□□ 1.28
PDLIM2-206ENST00000409141 NPR1P16066 1061 aa23.06■■□□□ 1.28
PDLIM2-206ENST00000409141 DDX58O95786 925 aaKnown RBP23.05■■□□□ 1.28
PDLIM2-206ENST00000409141 SLC4A2P04920 1241 aa23.05■■□□□ 1.28
PDLIM2-206ENST00000409141 ABCC12Q96J65 1359 aa23.05■■□□□ 1.28
PDLIM2-206ENST00000409141 ATP5J2-PTCD1G3V325 749 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms