RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 CLIP2Q9UDT6 1046 aa13.89□□□□□ -0.19
SMCR8-201ENST00000406438 IKBKGQ9Y6K9 419 aa13.89□□□□□ -0.19
SMCR8-201ENST00000406438 TAF7Q15545 349 aaPredicted RBP13.89□□□□□ -0.19
SMCR8-201ENST00000406438 NBPF1Q3BBV0 1214 aa13.89□□□□□ -0.19
SMCR8-201ENST00000406438 SAMM50Q9Y512 469 aa13.89□□□□□ -0.19
SMCR8-201ENST00000406438 IFIT3O14879 490 aaKnown RBP13.88□□□□□ -0.19
SMCR8-201ENST00000406438 SPATA24Q86W54 205 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 RRP9O43818 475 aaKnown RBP13.88□□□□□ -0.19
SMCR8-201ENST00000406438 LMAN1P49257 510 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 ZC3H6P61129 1189 aaKnown RBP13.88□□□□□ -0.19
SMCR8-201ENST00000406438 MYD88Q99836 296 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 ESPNB1AK53 854 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 MTIF2P46199 727 aaKnown RBP13.88□□□□□ -0.19
SMCR8-201ENST00000406438 DDX12PQ92771 950 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 TOP2BQ02880 1626 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 DNA2P51530 1060 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 MRPS9P82933 396 aaKnown RBP13.88□□□□□ -0.19
SMCR8-201ENST00000406438 PDE4BQ07343 736 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 TNNT1P13805 278 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 IFI16Q16666 785 aaKnown RBP13.88□□□□□ -0.19
SMCR8-201ENST00000406438 KANK3Q6NY19 840 aa13.88□□□□□ -0.19
SMCR8-201ENST00000406438 BAG3O95817 575 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 GSDMDP57764 484 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 POTEB2H3BUK9 544 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 URI1O94763 535 aaPredicted RBP13.87□□□□□ -0.19
SMCR8-201ENST00000406438 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 PRPF40BQ6NWY9 871 aaKnown RBP13.87□□□□□ -0.19
SMCR8-201ENST00000406438 MIS18AQ9NYP9 233 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 NOP2P46087 812 aaKnown RBP13.87□□□□□ -0.19
SMCR8-201ENST00000406438 CCDC172P0C7W6 258 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
SMCR8-201ENST00000406438 TBC1D5Q92609 795 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 CCDC82Q8N4S0 544 aa13.87□□□□□ -0.19
SMCR8-201ENST00000406438 CTR9Q6PD62 1173 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 PUF60Q9UHX1 559 aaKnown RBP13.86□□□□□ -0.19
SMCR8-201ENST00000406438 TMCO5BA8MYB1 307 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 PLVAPQ9BX97 442 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 CGNQ9P2M7 1197 aaKnown RBP13.86□□□□□ -0.19
SMCR8-201ENST00000406438 LIG1P18858 919 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 ACTN2P35609 894 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 STX1AQ16623 288 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
SMCR8-201ENST00000406438 GOLGA6L9A6NEM1 432 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 CA8P35219 290 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 MYO1BO43795 1136 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 GUCY1B3Q02153 619 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 IQGAP2Q13576 1575 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 TCERG1LQ5VWI1 586 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 TTC12Q9H892 705 aaPredicted RBP13.86□□□□□ -0.19
SMCR8-201ENST00000406438 SYNJ1O43426 1573 aa13.86□□□□□ -0.19
SMCR8-201ENST00000406438 SPECC1LQ69YQ0 1117 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 NEMFO60524 1076 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 HLA-DOAP06340 250 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 TRMT112Q9UI30 125 aaKnown RBP13.85□□□□□ -0.19
SMCR8-201ENST00000406438 CCDC174Q6PII3 467 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 SYNCQ9H7C4 482 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 RNF187Q5TA31 235 aaPredicted RBP13.85□□□□□ -0.19
SMCR8-201ENST00000406438 SPTY2D1Q68D10 685 aaPredicted RBP13.85□□□□□ -0.19
SMCR8-201ENST00000406438 LRRC27Q9C0I9 530 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 FERMT3Q86UX7 667 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 PPP1R14CQ8TAE6 165 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 CDC5LQ99459 802 aaKnown RBP13.85□□□□□ -0.19
SMCR8-201ENST00000406438 PTPRCP08575 1304 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 C6orf163Q5TEZ5 329 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 BICD1Q96G01 975 aa13.85□□□□□ -0.19
SMCR8-201ENST00000406438 MCM10Q7L590 875 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 MRC2Q9UBG0 1479 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 CCDC40Q4G0X9 1142 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 PRC1O43663 620 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 KAT14Q9H8E8 782 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 LRPPRCP42704 1394 aaKnown RBP13.84□□□□□ -0.19
SMCR8-201ENST00000406438 GOLGA8AA7E2F4 631 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 TMEM67Q5HYA8 995 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 EHBP1Q8NDI1 1231 aa13.84□□□□□ -0.19
SMCR8-201ENST00000406438 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
SMCR8-201ENST00000406438 JADE2Q9NQC1 790 aa13.83□□□□□ -0.19
SMCR8-201ENST00000406438 CCT2P78371 535 aaKnown RBP13.83□□□□□ -0.2
SMCR8-201ENST00000406438 MFSD6Q6ZSS7 791 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 CTTNBP2Q8WZ74 1663 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 AK9Q5TCS8 1911 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 ABCC11Q96J66 1382 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 FSIP1Q8NA03 581 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 A0A1W2PRG0 241 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 UBA7P41226 1012 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 USP37Q86T82 979 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 TICAM2Q86XR7 235 aa13.83□□□□□ -0.2
SMCR8-201ENST00000406438 CFAP57Q96MR6 1250 aa13.82□□□□□ -0.2
SMCR8-201ENST00000406438 TSPY2A6NKD2 308 aa13.82□□□□□ -0.2
SMCR8-201ENST00000406438 C6orf229H3BNL8 230 aa13.82□□□□□ -0.2
SMCR8-201ENST00000406438 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
SMCR8-201ENST00000406438 CABP5Q9NP86 173 aa13.82□□□□□ -0.2
SMCR8-201ENST00000406438 CAMSAP2Q08AD1 1489 aa13.82□□□□□ -0.2
SMCR8-201ENST00000406438 STX6O43752 255 aa13.82□□□□□ -0.2
SMCR8-201ENST00000406438 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms