RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 KRT24Q2M2I5 525 aa21.46■■□□□ 1.03
CGREF1-205ENST00000404694 NUP98P52948 1817 aa21.45■■□□□ 1.02
CGREF1-205ENST00000404694 EIF2S2P20042 333 aaKnown RBP21.45■■□□□ 1.02
CGREF1-205ENST00000404694 PRR5LQ6MZQ0 368 aa21.45■■□□□ 1.02
CGREF1-205ENST00000404694 NGEFQ8N5V2 710 aa21.45■■□□□ 1.02
CGREF1-205ENST00000404694 PIM2Q9P1W9 311 aa21.45■■□□□ 1.02
CGREF1-205ENST00000404694 COL11A2P13942 1736 aaPredicted RBP21.43■■□□□ 1.02
CGREF1-205ENST00000404694 ZNF853P0CG23 659 aa21.43■■□□□ 1.02
CGREF1-205ENST00000404694 PDIA6Q15084 440 aa21.43■■□□□ 1.02
CGREF1-205ENST00000404694 HLFQ16534 295 aa21.43■■□□□ 1.02
CGREF1-205ENST00000404694 TTLL7Q6ZT98 887 aa21.43■■□□□ 1.02
CGREF1-205ENST00000404694 LRP10Q7Z4F1 713 aa21.43■■□□□ 1.02
CGREF1-205ENST00000404694 CNBD1Q8NA66 436 aa21.43■■□□□ 1.02
CGREF1-205ENST00000404694 MAP3K15Q6ZN16 1313 aa21.42■■□□□ 1.02
CGREF1-205ENST00000404694 CALD1Q05682 793 aaKnown RBP21.42■■□□□ 1.02
CGREF1-205ENST00000404694 KIF6Q6ZMV9 814 aa21.42■■□□□ 1.02
CGREF1-205ENST00000404694 ZNF784Q8NCA9 323 aaPredicted RBP21.42■■□□□ 1.02
CGREF1-205ENST00000404694 MBIPQ9NS73 344 aa21.42■■□□□ 1.02
CGREF1-205ENST00000404694 IFT57Q9NWB7 429 aa21.42■■□□□ 1.02
CGREF1-205ENST00000404694 ERVV-1B6SEH8 477 aa21.41■■□□□ 1.02
CGREF1-205ENST00000404694 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
CGREF1-205ENST00000404694 CCDC24Q8N4L8 307 aa21.41■■□□□ 1.02
CGREF1-205ENST00000404694 NIP7Q9Y221 180 aaKnown RBP eCLIP21.41■■□□□ 1.02
CGREF1-205ENST00000404694 NPHP1O15259 732 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 GNAI1P63096 354 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
CGREF1-205ENST00000404694 PROSER3Q2NL68 480 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 C2CD5Q86YS7 1000 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 NECTIN2Q92692 538 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 BRIP1Q9BX63 1249 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 ATP10DQ9P241 1426 aa21.4■■□□□ 1.02
CGREF1-205ENST00000404694 SENP3-EIF4A1A0A087X0R7 540 aa21.39■■□□□ 1.02
CGREF1-205ENST00000404694 ANXA1P04083 346 aa21.39■■□□□ 1.02
CGREF1-205ENST00000404694 HOXB7P09629 217 aa21.39■■□□□ 1.02
CGREF1-205ENST00000404694 ST5P78524 1137 aa21.39■■□□□ 1.02
CGREF1-205ENST00000404694 NBPF5PQ86XG9 351 aaPredicted RBP21.39■■□□□ 1.02
CGREF1-205ENST00000404694 ZBTB3Q9H5J0 574 aa21.39■■□□□ 1.02
CGREF1-205ENST00000404694 H0YIN7 160 aa21.38■■□□□ 1.01
CGREF1-205ENST00000404694 CCDC27Q2M243 656 aa21.38■■□□□ 1.01
CGREF1-205ENST00000404694 PDE6BP35913 854 aa21.37■■□□□ 1.01
CGREF1-205ENST00000404694 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
CGREF1-205ENST00000404694 ADCY9O60503 1353 aa21.37■■□□□ 1.01
CGREF1-205ENST00000404694 DUSP27Q5VZP5 1158 aa21.36■■□□□ 1.01
CGREF1-205ENST00000404694 DDX21Q9NR30 783 aaKnown RBP eCLIP21.36■■□□□ 1.01
CGREF1-205ENST00000404694 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
CGREF1-205ENST00000404694 ZBED9Q6R2W3 1325 aa21.36■■□□□ 1.01
CGREF1-205ENST00000404694 ARHGAP27Q6ZUM4 889 aa21.36■■□□□ 1.01
CGREF1-205ENST00000404694 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
CGREF1-205ENST00000404694 ANKRD36CQ5JPF3 1778 aa21.35■■□□□ 1.01
CGREF1-205ENST00000404694 FAM177BA6PVY3 158 aa21.35■■□□□ 1.01
CGREF1-205ENST00000404694 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
CGREF1-205ENST00000404694 TPTE2Q6XPS3 522 aa21.35■■□□□ 1.01
CGREF1-205ENST00000404694 GIGYF2Q6Y7W6 1299 aaKnown RBP21.35■■□□□ 1.01
CGREF1-205ENST00000404694 WWC1Q8IX03 1113 aa21.35■■□□□ 1.01
CGREF1-205ENST00000404694 CACNA1SQ13698 1873 aa21.34■■□□□ 1.01
CGREF1-205ENST00000404694 TTLL6Q8N841 843 aa21.34■■□□□ 1.01
CGREF1-205ENST00000404694 XAGE3Q8WTP9 111 aa21.34■■□□□ 1.01
CGREF1-205ENST00000404694 UBN2Q6ZU65 1347 aa21.33■■□□□ 1.01
CGREF1-205ENST00000404694 ARFGEF2Q9Y6D5 1785 aa21.33■■□□□ 1.01
CGREF1-205ENST00000404694 TNRC6CQ9HCJ0 1690 aaKnown RBP21.33■■□□□ 1.01
CGREF1-205ENST00000404694 GPTP24298 496 aa21.33■■□□□ 1
CGREF1-205ENST00000404694 COPS6Q7L5N1 327 aa21.33■■□□□ 1
CGREF1-205ENST00000404694 IBTKQ9P2D0 1353 aaPredicted RBP21.32■■□□□ 1
CGREF1-205ENST00000404694 AIMP1Q12904 312 aaKnown RBP21.32■■□□□ 1
CGREF1-205ENST00000404694 ZNF34Q8IZ26 560 aa21.32■■□□□ 1
CGREF1-205ENST00000404694 ZNF622Q969S3 477 aaKnown RBP eCLIP21.32■■□□□ 1
CGREF1-205ENST00000404694 DBF4Q9UBU7 674 aaPredicted RBP21.32■■□□□ 1
CGREF1-205ENST00000404694 SRGNP10124 158 aa21.31■■□□□ 1
CGREF1-205ENST00000404694 NYXQ9GZU5 481 aa21.31■■□□□ 1
CGREF1-205ENST00000404694 ABCC12Q96J65 1359 aa21.31■■□□□ 1
CGREF1-205ENST00000404694 SBF1O95248 1867 aa21.3■■□□□ 1
CGREF1-205ENST00000404694 ELL2O00472 640 aaPredicted RBP21.3■■□□□ 1
CGREF1-205ENST00000404694 C8orf58Q8NAV2 365 aa21.3■■□□□ 1
CGREF1-205ENST00000404694 TSR2Q969E8 191 aaKnown RBP21.3■■□□□ 1
CGREF1-205ENST00000404694 KLRG2A4D1S0 409 aaPredicted RBP21.29■■□□□ 1
CGREF1-205ENST00000404694 GTF2E1P29083 439 aaPredicted RBP21.29■■□□□ 1
CGREF1-205ENST00000404694 STYK1Q6J9G0 422 aa21.29■■□□□ 1
CGREF1-205ENST00000404694 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
CGREF1-205ENST00000404694 IL16Q14005 1332 aa21.29■■□□□ 1
CGREF1-205ENST00000404694 SLX4Q8IY92 1834 aa21.29■■□□□ 1
CGREF1-205ENST00000404694 RIC1Q4ADV7 1423 aa21.28■■□□□ 1
CGREF1-205ENST00000404694 SUSD4Q5VX71 490 aa21.28■■□□□ 1
CGREF1-205ENST00000404694 MASTLQ96GX5 879 aa21.28■■□□□ 1
CGREF1-205ENST00000404694 SALL2Q9Y467 1007 aaPredicted RBP21.28■■□□□ 1
CGREF1-205ENST00000404694 NTSR2O95665 410 aa21.27■■□□□ 1
CGREF1-205ENST00000404694 ERFEQ4G0M1 354 aa21.27■■□□□ 1
CGREF1-205ENST00000404694 PARP10Q53GL7 1025 aa21.27■■□□□ 1
CGREF1-205ENST00000404694 HYPKQ9NX55 129 aa21.27■■□□□ 1
CGREF1-205ENST00000404694 HSP90AB3PQ58FF7 597 aa21.26■□□□□ 0.99
CGREF1-205ENST00000404694 TSPYL6Q8N831 410 aa21.26■□□□□ 0.99
CGREF1-205ENST00000404694 CNKSR1Q969H4 720 aa21.26■□□□□ 0.99
CGREF1-205ENST00000404694 FER1L6Q2WGJ9 1857 aa21.26■□□□□ 0.99
CGREF1-205ENST00000404694 NPR1P16066 1061 aa21.25■□□□□ 0.99
CGREF1-205ENST00000404694 RASSF7Q02833 373 aa21.25■□□□□ 0.99
CGREF1-205ENST00000404694 C9orf131Q5VYM1 1079 aa21.25■□□□□ 0.99
CGREF1-205ENST00000404694 PRPF40BQ6NWY9 871 aaKnown RBP21.25■□□□□ 0.99
CGREF1-205ENST00000404694 PPP1R42Q7Z4L9 355 aa21.25■□□□□ 0.99
CGREF1-205ENST00000404694 PLBD2Q8NHP8 589 aa21.25■□□□□ 0.99
CGREF1-205ENST00000404694 C21orf2O43822 256 aa21.24■□□□□ 0.99
CGREF1-205ENST00000404694 WDR63Q8IWG1 891 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms