RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 CDKL5O76039 1030 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 SSFA2P28290 1259 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 SF3B2Q13435 895 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 CFAP100Q494V2 611 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 C8orf76Q96K31 380 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 PHF8Q9UPP1 1060 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 SDSP20132 328 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 NUCB1Q02818 461 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 SLC39A6Q13433 755 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 SYCP1Q15431 976 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 DZIP1Q86YF9 867 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 CKAP2LQ8IYA6 745 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 CEP57L1Q8IYX8 460 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 TNPO1Q92973 898 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 CENPHQ9H3R5 247 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 RBM27Q9P2N5 1060 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 ZNF638Q14966 1978 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 POLR3DP05423 398 aaPredicted RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 C8orf58Q8NAV2 365 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 NGLY1Q96IV0 654 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 SNRKQ9NRH2 765 aa3.81□□□□□ -1.8
KNL1-202ENST00000399668 TRMT112Q9UI30 125 aaKnown RBP3.81□□□□□ -1.8
KNL1-202ENST00000399668 LDHAL6AQ6ZMR3 332 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 CABLES1Q8TDN4 633 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 ATP7AQ04656 1500 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 TRAPPC8Q9Y2L5 1435 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 NFATC2IPQ8NCF5 419 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 TBC1D32Q96NH3 1257 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 LRRC2Q9BYS8 371 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 CWC25Q9NXE8 425 aaPredicted RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 CIZ1Q9ULV3 898 aaPredicted RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 TTC21BQ7Z4L5 1316 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 MATR3P43243 847 aaKnown RBP eCLIP3.8□□□□□ -1.8
KNL1-202ENST00000399668 NOM1Q5C9Z4 860 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 CCDC183Q5T5S1 534 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 SOGA3Q5TF21 947 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 RAB11FIP4Q86YS3 637 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 ANKRD24Q8TF21 1146 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 CARD14Q9BXL6 1004 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 NUP205Q92621 2012 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 SRCAPQ6ZRS2 3230 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 ANKRD36BQ8N2N9 1353 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 CHD2O14647 1828 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 TTC3P53804 2025 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 GRM8O00222 908 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 IFIT3O14879 490 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 ZNF76P36508 570 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 KRT24Q2M2I5 525 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 TRMT1LQ7Z2T5 733 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 KIAA1328Q86T90 577 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 LIMCH1Q9UPQ0 1083 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 NCKAP5LQ9HCH0 1330 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 ZMYM4Q5VZL5 1548 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 GOLGA8BA8MQT2 603 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 AXDND1Q5T1B0 1012 aaPredicted RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 DDX46Q7L014 1031 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 CHST3Q7LGC8 479 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 IQCA1Q86XH1 822 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 ACSBG1Q96GR2 724 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 TRMT1Q9NXH9 659 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 SEC63Q9UGP8 760 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 TNNQ9UQP3 1299 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 NPATQ14207 1427 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 BIN1O00499 593 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 RLBP1P12271 317 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 MAP3K12Q12852 859 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 ANKRD13DQ6ZTN6 518 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 MICU3Q86XE3 530 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 NECAB1Q8N987 351 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 EVI5LQ96CN4 794 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 PLCH2O75038 1416 aa3.8□□□□□ -1.8
KNL1-202ENST00000399668 CLTCQ00610 1675 aaKnown RBP3.8□□□□□ -1.8
KNL1-202ENST00000399668 PLXNC1O60486 1568 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 ABCC10Q5T3U5 1492 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 TMX1Q9H3N1 280 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 VAT1LQ9HCJ6 419 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 NOL7Q9UMY1 257 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 PPP6R1Q9UPN7 881 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 SLC12A7Q9Y666 1083 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 GJB2P29033 226 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 BMP2KLQ5H9B9 411 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 ZNF444Q8N0Y2 327 aaPredicted RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 TCEANC2Q96MN5 208 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.79□□□□□ -1.88e-7■■■■■ 117
KNL1-202ENST00000399668 SEPT11Q9NVA2 429 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 EXOC5O00471 708 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 SEC24BO95487 1268 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 NEFHP12036 1026 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 RPGRQ92834 1020 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 LRRC59Q96AG4 307 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 ZSCAN31Q96LW9 406 aaPredicted RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 ACBD3Q9H3P7 528 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 ZNF219Q9P2Y4 722 aaPredicted RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 PZPP20742 1482 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 NSD2O96028 1365 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 STX6O43752 255 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 IBSPP21815 317 aaPredicted RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 FAM193AP78312 1265 aa3.79□□□□□ -1.8
KNL1-202ENST00000399668 HMGN5P82970 282 aaKnown RBP3.79□□□□□ -1.8
KNL1-202ENST00000399668 GIMAP6Q6P9H5 292 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms