RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 ADCY5O95622 1261 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 NLRP5P59047 1200 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 ZNF652Q9Y2D9 606 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 HMGB1P09429 215 aaKnown RBP15.28■□□□□ 0.04
ITSN1-208ENST00000399349 ZNF165P49910 485 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 CCDC113Q9H0I3 377 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 TMOD2Q9NZR1 351 aa15.28■□□□□ 0.04
ITSN1-208ENST00000399349 ANKRD18BA2A2Z9 1011 aa15.27■□□□□ 0.04
ITSN1-208ENST00000399349 VAT1LQ9HCJ6 419 aa15.27■□□□□ 0.04
ITSN1-208ENST00000399349 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.04
ITSN1-208ENST00000399349 KIF5CO60282 957 aa15.27■□□□□ 0.04
ITSN1-208ENST00000399349 GIMAP6Q6P9H5 292 aa15.27■□□□□ 0.04
ITSN1-208ENST00000399349 TMC6Q7Z403 805 aa15.27■□□□□ 0.04
ITSN1-208ENST00000399349 NUP88Q99567 741 aaPredicted RBP15.27■□□□□ 0.04
ITSN1-208ENST00000399349 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.04
ITSN1-208ENST00000399349 IDEP14735 1019 aa15.27■□□□□ 0.03
ITSN1-208ENST00000399349 CHRNA2Q15822 529 aa15.27■□□□□ 0.03
ITSN1-208ENST00000399349 TTC22Q5TAA0 569 aa15.27■□□□□ 0.03
ITSN1-208ENST00000399349 CAMSAP2Q08AD1 1489 aa15.27■□□□□ 0.03
ITSN1-208ENST00000399349 NCOA1Q15788 1441 aa15.27■□□□□ 0.03
ITSN1-208ENST00000399349 PTPRCP08575 1304 aa15.27■□□□□ 0.03
ITSN1-208ENST00000399349 POLR3GO15318 223 aaPredicted RBP15.27■□□□□ 0.03
ITSN1-208ENST00000399349 TDRD12Q587J7 1177 aaKnown RBP15.27■□□□□ 0.03
ITSN1-208ENST00000399349 SSRP1Q08945 709 aaKnown RBP15.26■□□□□ 0.03
ITSN1-208ENST00000399349 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
ITSN1-208ENST00000399349 SLC5A1P13866 664 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 SDSP20132 328 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 HSP90AA4PQ58FG1 418 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 FKBP15Q5T1M5 1219 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 BRF1Q92994 677 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 TRERF1Q96PN7 1200 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 IARSP41252 1262 aaKnown RBP15.26■□□□□ 0.03
ITSN1-208ENST00000399349 ZSWIM4Q9H7M6 989 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 ZNF287Q9HBT7 754 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 TNNQ9UQP3 1299 aa15.26■□□□□ 0.03
ITSN1-208ENST00000399349 MACROD2A1Z1Q3 448 aa15.25■□□□□ 0.03
ITSN1-208ENST00000399349 NEK1Q96PY6 1258 aa15.25■□□□□ 0.03
ITSN1-208ENST00000399349 ZNF830Q96NB3 372 aaPredicted RBP15.25■□□□□ 0.03
ITSN1-208ENST00000399349 NOS1P29475 1434 aa15.25■□□□□ 0.03
ITSN1-208ENST00000399349 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
ITSN1-208ENST00000399349 TMEM67Q5HYA8 995 aa15.25■□□□□ 0.03
ITSN1-208ENST00000399349 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
ITSN1-208ENST00000399349 CASQ1P31415 396 aa15.25■□□□□ 0.03
ITSN1-208ENST00000399349 DDX19AQ9NUU7 478 aaKnown RBP15.25■□□□□ 0.03
ITSN1-208ENST00000399349 CALRP27797 417 aaKnown RBP15.24■□□□□ 0.03
ITSN1-208ENST00000399349 SPTY2D1Q68D10 685 aaPredicted RBP15.24■□□□□ 0.03
ITSN1-208ENST00000399349 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
ITSN1-208ENST00000399349 RHPN1Q8TCX5 695 aa15.24■□□□□ 0.03
ITSN1-208ENST00000399349 GOLGA6L7A0A1B0GV03 622 aa15.24■□□□□ 0.03
ITSN1-208ENST00000399349 C8orf34Q49A92 452 aa15.24■□□□□ 0.03
ITSN1-208ENST00000399349 KIF2AO00139 706 aaPredicted RBP15.24■□□□□ 0.03
ITSN1-208ENST00000399349 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
ITSN1-208ENST00000399349 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
ITSN1-208ENST00000399349 C6orf229H3BNL8 230 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 ZRSR2Q15696 482 aaKnown RBP15.23■□□□□ 0.03
ITSN1-208ENST00000399349 JAKMIP3Q5VZ66 844 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 CATIPQ7Z7H3 387 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 LUZP1Q86V48 1076 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 SLC26A6Q9BXS9 759 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 ACEP12821 1306 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 KIAA0586Q9BVV6 1533 aa15.23■□□□□ 0.03
ITSN1-208ENST00000399349 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.23■□□□□ 0.03
ITSN1-208ENST00000399349 RNF41Q9H4P4 317 aaPredicted RBP15.23■□□□□ 0.03
ITSN1-208ENST00000399349 CD109Q6YHK3 1445 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 CTAGE5O15320 804 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 LIG1P18858 919 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 CCDC178Q5BJE1 867 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 TCERG1LQ5VWI1 586 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 MTIF2P46199 727 aaKnown RBP15.22■□□□□ 0.03
ITSN1-208ENST00000399349 CHPF2Q9P2E5 772 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 SLC39A6Q13433 755 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 WDR78Q5VTH9 848 aa15.22■□□□□ 0.03
ITSN1-208ENST00000399349 TSPY2A6NKD2 308 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 METAP2P50579 478 aaKnown RBP eCLIP15.21■□□□□ 0.03
ITSN1-208ENST00000399349 TSG101Q99816 390 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 CWC25Q9NXE8 425 aaPredicted RBP15.21■□□□□ 0.03
ITSN1-208ENST00000399349 ZSCAN23Q3MJ62 389 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 ANKRD18AQ8IVF6 992 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 C8orf58Q8NAV2 365 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 DYDC1Q8WWB3 177 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 CGNQ9P2M7 1197 aaKnown RBP15.21■□□□□ 0.03
ITSN1-208ENST00000399349 DNAJC5BQ9UF47 199 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 KLHL40Q2TBA0 621 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 POGZQ7Z3K3 1410 aa15.21■□□□□ 0.03
ITSN1-208ENST00000399349 NUCB1Q02818 461 aa15.21■□□□□ 0.02
ITSN1-208ENST00000399349 KRT28Q7Z3Y7 464 aa15.21■□□□□ 0.02
ITSN1-208ENST00000399349 CNPY2Q9Y2B0 182 aa15.21■□□□□ 0.02
ITSN1-208ENST00000399349 UBE2HP62256 183 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 ANKRD13DQ6ZTN6 518 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 GBP3Q9H0R5 595 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 C14orf93Q9H972 538 aaKnown RBP15.2■□□□□ 0.02
ITSN1-208ENST00000399349 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 STX1AQ16623 288 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 TMEM266Q2M3C6 531 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 CTNNBL1Q8WYA6 563 aaPredicted RBP15.2■□□□□ 0.02
ITSN1-208ENST00000399349 RAB34Q9BZG1 259 aa15.2■□□□□ 0.02
ITSN1-208ENST00000399349 RNF216Q9NWF9 866 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms