RNA–Protein interactions for RNA: ENST00000398888.6

USP19-202, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP19, Length 4,559 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-202ENST00000398888 PDRG1Q9NUG6 133 aa15.27■□□□□ 0.03
USP19-202ENST00000398888 PIK3C2GO75747 1445 aa15.27■□□□□ 0.03
USP19-202ENST00000398888 TMPOP42166 694 aaKnown RBP15.27■□□□□ 0.03
USP19-202ENST00000398888 DBN1Q16643 649 aa15.27■□□□□ 0.03
USP19-202ENST00000398888 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.03
USP19-202ENST00000398888 SPECC1Q5M775 1068 aa15.27■□□□□ 0.03
USP19-202ENST00000398888 GIGYF2Q6Y7W6 1299 aaKnown RBP15.27■□□□□ 0.03
USP19-202ENST00000398888 CTAGE5O15320 804 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 ANO6Q4KMQ2 910 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 CCDC83Q8IWF9 413 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 JMYQ8N9B5 988 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 ZSCAN31Q96LW9 406 aaPredicted RBP15.26■□□□□ 0.03
USP19-202ENST00000398888 USP48Q86UV5 1035 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 SEPT6Q14141 434 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 CCDC6Q16204 474 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 CCDC50Q8IVM0 306 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 ZMYM4Q5VZL5 1548 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 COL17A1Q9UMD9 1497 aaPredicted RBP15.26■□□□□ 0.03
USP19-202ENST00000398888 HSF2BPO75031 334 aa15.26■□□□□ 0.03
USP19-202ENST00000398888 BLMP54132 1417 aaPredicted RBP15.25■□□□□ 0.03
USP19-202ENST00000398888 OPA1O60313 960 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 BUB1BO60566 1050 aaPredicted RBP15.25■□□□□ 0.03
USP19-202ENST00000398888 PPP2R3AQ06190 1150 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 IFFO1Q0D2I5 559 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 STX1AQ16623 288 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 CEP85LQ5SZL2 805 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 CNTROBQ8N137 903 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 MAATS1Q7Z4T9 603 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 SSH1Q8WYL5 1049 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 SLC24A3Q9HC58 644 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 ADGRL2O95490 1459 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 TXLNAP40222 546 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 NEDD9Q14511 834 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 ZNF215Q9UL58 517 aaPredicted RBP15.25■□□□□ 0.03
USP19-202ENST00000398888 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
USP19-202ENST00000398888 HMOX1P09601 288 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 RAD51AP2Q09MP3 1159 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 TWISTNBQ3B726 338 aaPredicted RBP15.24■□□□□ 0.03
USP19-202ENST00000398888 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 TMEM51Q9NW97 253 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 FRMD3A2A2Y4 597 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 CAPN7Q9Y6W3 813 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 ARHGAP25P42331 645 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 PAFAH1B1P43034 410 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 SEPT7Q16181 437 aaKnown RBP15.24■□□□□ 0.03
USP19-202ENST00000398888 IMMTQ16891 758 aaKnown RBP15.24■□□□□ 0.03
USP19-202ENST00000398888 TBC1D9Q6ZT07 1266 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 SPATA24Q86W54 205 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 IRAK4Q9NWZ3 460 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 WHAMMP3Q1A5X7 153 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 DZIP1Q86YF9 867 aaKnown RBP15.24■□□□□ 0.03
USP19-202ENST00000398888 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
USP19-202ENST00000398888 RABEP2Q9H5N1 569 aa15.24■□□□□ 0.03
USP19-202ENST00000398888 FEZ2Q9UHY8 353 aaPredicted RBP15.24■□□□□ 0.03
USP19-202ENST00000398888 RPGRIP1LQ68CZ1 1315 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 HDAC1Q13547 482 aaPredicted RBP15.23■□□□□ 0.03
USP19-202ENST00000398888 MRFAP1L1Q96HT8 127 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 LUC7LQ9NQ29 371 aaKnown RBP15.23■□□□□ 0.03
USP19-202ENST00000398888 CCDC160A6NGH7 325 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 FBF1Q8TES7 1133 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 MAGEC2Q9UBF1 373 aaPredicted RBP15.23■□□□□ 0.03
USP19-202ENST00000398888 EIF2AK4Q9P2K8 1649 aaKnown RBP15.23■□□□□ 0.03
USP19-202ENST00000398888 ANKRD1Q15327 319 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 MIPOL1Q8TD10 442 aa15.23■□□□□ 0.03
USP19-202ENST00000398888 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.23■□□□□ 0.03
USP19-202ENST00000398888 STX6O43752 255 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 TUBBP07437 444 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 BMP2KLQ5H9B9 411 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 FBXO3Q9UK99 471 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 SATB1Q01826 763 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 ISM2Q6H9L7 571 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 ODF2LQ9ULJ1 636 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 FCHSD2O94868 740 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 RHOXF2BP0C7M4 288 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 PCK1P35558 622 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
USP19-202ENST00000398888 LMNTD2Q8IXW0 634 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 RHOXF2Q9BQY4 288 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 CARD6Q9BX69 1037 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 TFIP11Q9UBB9 837 aaKnown RBP15.22■□□□□ 0.03
USP19-202ENST00000398888 FAM135AQ9P2D6 1515 aa15.22■□□□□ 0.03
USP19-202ENST00000398888 TRIM27P14373 513 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 ATP2B1P20020 1258 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 ERCC6LQ2NKX8 1250 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 ANKRD62A6NC57 917 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 RGS22Q8NE09 1264 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 CPLX3Q8WVH0 158 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 TUBB4BP68371 445 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
USP19-202ENST00000398888 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
USP19-202ENST00000398888 PUF60Q9UHX1 559 aaKnown RBP15.21■□□□□ 0.03
USP19-202ENST00000398888 NUTM1Q86Y26 1132 aa15.21■□□□□ 0.02
USP19-202ENST00000398888 EFCAB13Q8IY85 973 aa15.21■□□□□ 0.02
USP19-202ENST00000398888 JPH2Q9BR39 696 aaPredicted RBP15.21■□□□□ 0.02
USP19-202ENST00000398888 PPP1R12CQ9BZL4 782 aa15.21■□□□□ 0.02
USP19-202ENST00000398888 DNAJC25Q9H1X3 360 aa15.21■□□□□ 0.02
USP19-202ENST00000398888 GEMIN8Q9NWZ8 242 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms