RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KIF6Q6ZMV9 814 aa18.95■□□□□ 0.62
SEC13-208ENST00000397109 HOXB7P09629 217 aa18.94■□□□□ 0.62
SEC13-208ENST00000397109 CHRNA5P30532 468 aa18.94■□□□□ 0.62
SEC13-208ENST00000397109 GNAI1P63096 354 aa18.94■□□□□ 0.62
SEC13-208ENST00000397109 DALRD3Q5D0E6 543 aaKnown RBP18.94■□□□□ 0.62
SEC13-208ENST00000397109 BRIP1Q9BX63 1249 aa18.94■□□□□ 0.62
SEC13-208ENST00000397109 IFT57Q9NWB7 429 aa18.94■□□□□ 0.62
SEC13-208ENST00000397109 MAP3K15Q6ZN16 1313 aa18.93■□□□□ 0.62
SEC13-208ENST00000397109 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
SEC13-208ENST00000397109 PDE6BP35913 854 aa18.93■□□□□ 0.62
SEC13-208ENST00000397109 NCBP3Q53F19 620 aaKnown RBP18.93■□□□□ 0.62
SEC13-208ENST00000397109 PRR5LQ6MZQ0 368 aa18.93■□□□□ 0.62
SEC13-208ENST00000397109 CNBD1Q8NA66 436 aa18.93■□□□□ 0.62
SEC13-208ENST00000397109 BRCA1P38398 1863 aaKnown RBP18.93■□□□□ 0.62
SEC13-208ENST00000397109 H0YIN7 160 aa18.92■□□□□ 0.62
SEC13-208ENST00000397109 ST5P78524 1137 aa18.92■□□□□ 0.62
SEC13-208ENST00000397109 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
SEC13-208ENST00000397109 NBPF5PQ86XG9 351 aaPredicted RBP18.92■□□□□ 0.62
SEC13-208ENST00000397109 NIP7Q9Y221 180 aaKnown RBP eCLIP18.92■□□□□ 0.62
SEC13-208ENST00000397109 PDIA6Q15084 440 aa18.91■□□□□ 0.62
SEC13-208ENST00000397109 HLFQ16534 295 aa18.91■□□□□ 0.62
SEC13-208ENST00000397109 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
SEC13-208ENST00000397109 C2CD5Q86YS7 1000 aa18.91■□□□□ 0.62
SEC13-208ENST00000397109 MBIPQ9NS73 344 aa18.91■□□□□ 0.62
SEC13-208ENST00000397109 TPTE2Q6XPS3 522 aa18.9■□□□□ 0.62
SEC13-208ENST00000397109 ZNF784Q8NCA9 323 aaPredicted RBP18.9■□□□□ 0.62
SEC13-208ENST00000397109 KRT24Q2M2I5 525 aa18.9■□□□□ 0.62
SEC13-208ENST00000397109 ARHGAP27Q6ZUM4 889 aa18.9■□□□□ 0.62
SEC13-208ENST00000397109 DDX21Q9NR30 783 aaKnown RBP eCLIP18.9■□□□□ 0.623e-7■■■□□ 17.1
SEC13-208ENST00000397109 ARFGEF1Q9Y6D6 1849 aa18.89■□□□□ 0.61
SEC13-208ENST00000397109 HDGFL1Q5TGJ6 251 aa18.89■□□□□ 0.61
SEC13-208ENST00000397109 LRP10Q7Z4F1 713 aa18.89■□□□□ 0.61
SEC13-208ENST00000397109 TTLL6Q8N841 843 aa18.89■□□□□ 0.61
SEC13-208ENST00000397109 NECTIN2Q92692 538 aa18.89■□□□□ 0.61
SEC13-208ENST00000397109 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
SEC13-208ENST00000397109 GIGYF2Q6Y7W6 1299 aaKnown RBP18.88■□□□□ 0.61
SEC13-208ENST00000397109 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
SEC13-208ENST00000397109 NYXQ9GZU5 481 aa18.88■□□□□ 0.61
SEC13-208ENST00000397109 ZBTB3Q9H5J0 574 aa18.88■□□□□ 0.61
SEC13-208ENST00000397109 NUP98P52948 1817 aa18.87■□□□□ 0.61
SEC13-208ENST00000397109 ATP10DQ9P241 1426 aa18.87■□□□□ 0.61
SEC13-208ENST00000397109 PROSER3Q2NL68 480 aa18.87■□□□□ 0.61
SEC13-208ENST00000397109 WWC1Q8IX03 1113 aa18.87■□□□□ 0.61
SEC13-208ENST00000397109 CCDC24Q8N4L8 307 aa18.87■□□□□ 0.61
SEC13-208ENST00000397109 ANXA1P04083 346 aa18.86■□□□□ 0.61
SEC13-208ENST00000397109 GTF2E1P29083 439 aaPredicted RBP18.86■□□□□ 0.61
SEC13-208ENST00000397109 DBF4Q9UBU7 674 aaPredicted RBP18.86■□□□□ 0.61
SEC13-208ENST00000397109 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
SEC13-208ENST00000397109 COPS6Q7L5N1 327 aa18.85■□□□□ 0.61
SEC13-208ENST00000397109 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
SEC13-208ENST00000397109 CHPF2Q9P2E5 772 aa18.85■□□□□ 0.61
SEC13-208ENST00000397109 DLEC1Q9Y238 1755 aa18.85■□□□□ 0.61
SEC13-208ENST00000397109 IL16Q14005 1332 aa18.85■□□□□ 0.61
SEC13-208ENST00000397109 FAM177BA6PVY3 158 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 HSP90AB3PQ58FF7 597 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 STYK1Q6J9G0 422 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 ZNF34Q8IZ26 560 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 XAGE3Q8WTP9 111 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 HYPKQ9NX55 129 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 SRGNP10124 158 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 AIMP1Q12904 312 aaKnown RBP18.84■□□□□ 0.61
SEC13-208ENST00000397109 PARP10Q53GL7 1025 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 MASTLQ96GX5 879 aa18.84■□□□□ 0.61
SEC13-208ENST00000397109 IBTKQ9P2D0 1353 aaPredicted RBP18.83■□□□□ 0.6
SEC13-208ENST00000397109 GPTP24298 496 aa18.83■□□□□ 0.6
SEC13-208ENST00000397109 PPP1R42Q7Z4L9 355 aa18.83■□□□□ 0.6
SEC13-208ENST00000397109 KLRG2A4D1S0 409 aaPredicted RBP18.82■□□□□ 0.6
SEC13-208ENST00000397109 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
SEC13-208ENST00000397109 ADCY9O60503 1353 aa18.81■□□□□ 0.6
SEC13-208ENST00000397109 ELL2O00472 640 aaPredicted RBP18.81■□□□□ 0.6
SEC13-208ENST00000397109 NPR1P16066 1061 aa18.81■□□□□ 0.6
SEC13-208ENST00000397109 UBN2Q6ZU65 1347 aa18.81■□□□□ 0.6
SEC13-208ENST00000397109 SENP3-EIF4A1A0A087X0R7 540 aa18.8■□□□□ 0.6
SEC13-208ENST00000397109 SUSD4Q5VX71 490 aa18.8■□□□□ 0.6
SEC13-208ENST00000397109 C8orf58Q8NAV2 365 aa18.8■□□□□ 0.6
SEC13-208ENST00000397109 TCIRG1Q13488 830 aa18.79■□□□□ 0.6
SEC13-208ENST00000397109 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
SEC13-208ENST00000397109 ANKRD13DQ6ZTN6 518 aa18.79■□□□□ 0.6
SEC13-208ENST00000397109 PLBD2Q8NHP8 589 aa18.79■□□□□ 0.6
SEC13-208ENST00000397109 COL11A2P13942 1736 aaPredicted RBP18.78■□□□□ 0.6
SEC13-208ENST00000397109 NUTM1Q86Y26 1132 aa18.78■□□□□ 0.6
SEC13-208ENST00000397109 TSR2Q969E8 191 aaKnown RBP18.78■□□□□ 0.6
SEC13-208ENST00000397109 UTP14AQ9BVJ6 771 aaKnown RBP18.78■□□□□ 0.6
SEC13-208ENST00000397109 SALL2Q9Y467 1007 aaPredicted RBP18.78■□□□□ 0.6
SEC13-208ENST00000397109 RNF123Q5XPI4 1314 aa18.78■□□□□ 0.6
SEC13-208ENST00000397109 NTSR2O95665 410 aa18.77■□□□□ 0.6
SEC13-208ENST00000397109 ERFEQ4G0M1 354 aa18.77■□□□□ 0.6
SEC13-208ENST00000397109 SOGA3Q5TF21 947 aa18.77■□□□□ 0.6
SEC13-208ENST00000397109 C9orf131Q5VYM1 1079 aa18.77■□□□□ 0.6
SEC13-208ENST00000397109 RIC1Q4ADV7 1423 aa18.77■□□□□ 0.6
SEC13-208ENST00000397109 ALDH1B1P30837 517 aa18.77■□□□□ 0.59
SEC13-208ENST00000397109 PRPF40BQ6NWY9 871 aaKnown RBP18.77■□□□□ 0.59
SEC13-208ENST00000397109 C21orf2O43822 256 aa18.76■□□□□ 0.59
SEC13-208ENST00000397109 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
SEC13-208ENST00000397109 TSPYL6Q8N831 410 aa18.76■□□□□ 0.59
SEC13-208ENST00000397109 GPBP1L1Q9HC44 474 aaPredicted RBP18.76■□□□□ 0.59
SEC13-208ENST00000397109 RNF181Q9P0P0 153 aa18.76■□□□□ 0.59
SEC13-208ENST00000397109 ABCC12Q96J65 1359 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms