RNA–Protein interactions for RNA: ENST00000394921.8

PMS2P3-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 3, humanhuman

TSL 2

Gene PMS2P3, Length 1,316 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P3-201ENST00000394921 TTLL6Q8N841 843 aa30.2■■■□□ 2.42
PMS2P3-201ENST00000394921 TRIM35Q9UPQ4 493 aa30.2■■■□□ 2.42
PMS2P3-201ENST00000394921 PDE6BP35913 854 aa30.19■■■□□ 2.42
PMS2P3-201ENST00000394921 HLFQ16534 295 aa30.19■■■□□ 2.42
PMS2P3-201ENST00000394921 C9orf131Q5VYM1 1079 aa30.18■■■□□ 2.42
PMS2P3-201ENST00000394921 PDZRN3Q9UPQ7 1066 aa30.18■■■□□ 2.42
PMS2P3-201ENST00000394921 NGEFQ8N5V2 710 aa30.17■■■□□ 2.42
PMS2P3-201ENST00000394921 NIP7Q9Y221 180 aaKnown RBP eCLIP30.16■■■□□ 2.42
PMS2P3-201ENST00000394921 NUP98P52948 1817 aa30.15■■■□□ 2.42
PMS2P3-201ENST00000394921 ERBB4Q15303 1308 aa30.15■■■□□ 2.42
PMS2P3-201ENST00000394921 ST5P78524 1137 aa30.15■■■□□ 2.42
PMS2P3-201ENST00000394921 TTLL7Q6ZT98 887 aa30.15■■■□□ 2.42
PMS2P3-201ENST00000394921 NBPF5PQ86XG9 351 aaPredicted RBP30.15■■■□□ 2.42
PMS2P3-201ENST00000394921 MYL6BP14649 208 aa30.14■■■□□ 2.42
PMS2P3-201ENST00000394921 ZNF622Q969S3 477 aaKnown RBP eCLIP30.14■■■□□ 2.421e-6■■□□□ 14.4
PMS2P3-201ENST00000394921 MAP3K15Q6ZN16 1313 aa30.13■■■□□ 2.41
PMS2P3-201ENST00000394921 ERVV-1B6SEH8 477 aa30.13■■■□□ 2.41
PMS2P3-201ENST00000394921 NPHP1O15259 732 aa30.13■■■□□ 2.41
PMS2P3-201ENST00000394921 CHL1O00533 1208 aa30.12■■■□□ 2.41
PMS2P3-201ENST00000394921 RASSF7Q02833 373 aa30.12■■■□□ 2.41
PMS2P3-201ENST00000394921 LRP10Q7Z4F1 713 aa30.12■■■□□ 2.41
PMS2P3-201ENST00000394921 KIF3CO14782 793 aa30.11■■■□□ 2.41
PMS2P3-201ENST00000394921 SRGNP10124 158 aa30.11■■■□□ 2.41
PMS2P3-201ENST00000394921 PDIA6Q15084 440 aa30.11■■■□□ 2.41
PMS2P3-201ENST00000394921 RNF181Q9P0P0 153 aa30.11■■■□□ 2.41
PMS2P3-201ENST00000394921 SLX4Q8IY92 1834 aa30.09■■■□□ 2.41
PMS2P3-201ENST00000394921 EIF2S2P20042 333 aaKnown RBP30.09■■■□□ 2.41
PMS2P3-201ENST00000394921 PRELPP51888 382 aa30.09■■■□□ 2.41
PMS2P3-201ENST00000394921 STYK1Q6J9G0 422 aa30.09■■■□□ 2.41
PMS2P3-201ENST00000394921 TPTE2Q6XPS3 522 aa30.09■■■□□ 2.41
PMS2P3-201ENST00000394921 ARFGEF2Q9Y6D5 1785 aa30.08■■■□□ 2.41
PMS2P3-201ENST00000394921 NFKBIEO00221 500 aa30.08■■■□□ 2.41
PMS2P3-201ENST00000394921 KIF6Q6ZMV9 814 aa30.08■■■□□ 2.41
PMS2P3-201ENST00000394921 CACNA1SQ13698 1873 aa30.08■■■□□ 2.41
PMS2P3-201ENST00000394921 FAM177BA6PVY3 158 aa30.07■■■□□ 2.4
PMS2P3-201ENST00000394921 KRT24Q2M2I5 525 aa30.07■■■□□ 2.4
PMS2P3-201ENST00000394921 PROSER3Q2NL68 480 aa30.07■■■□□ 2.4
PMS2P3-201ENST00000394921 ZBTB3Q9H5J0 574 aa30.07■■■□□ 2.4
PMS2P3-201ENST00000394921 KLRG2A4D1S0 409 aaPredicted RBP30.06■■■□□ 2.4
PMS2P3-201ENST00000394921 CCDC184Q52MB2 194 aa30.06■■■□□ 2.4
PMS2P3-201ENST00000394921 MASTLQ96GX5 879 aa30.06■■■□□ 2.4
PMS2P3-201ENST00000394921 LAS1LQ9Y4W2 734 aaKnown RBP30.06■■■□□ 2.4
PMS2P3-201ENST00000394921 CCDC88AQ3V6T2 1871 aa30.06■■■□□ 2.4
PMS2P3-201ENST00000394921 FER1L6Q2WGJ9 1857 aa30.05■■■□□ 2.4
PMS2P3-201ENST00000394921 SENP3-EIF4A1A0A087X0R7 540 aa30.05■■■□□ 2.4
PMS2P3-201ENST00000394921 C21orf2O43822 256 aa30.05■■■□□ 2.4
PMS2P3-201ENST00000394921 CNKSR1Q969H4 720 aa30.05■■■□□ 2.4
PMS2P3-201ENST00000394921 APAF1O14727 1248 aa30.04■■■□□ 2.4
PMS2P3-201ENST00000394921 ANXA1P04083 346 aa30.04■■■□□ 2.4
PMS2P3-201ENST00000394921 ZNF219Q9P2Y4 722 aaPredicted RBP30.04■■■□□ 2.4
PMS2P3-201ENST00000394921 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
PMS2P3-201ENST00000394921 LMNB1P20700 586 aa30.03■■■□□ 2.4
PMS2P3-201ENST00000394921 NMRK2Q9NPI5 230 aa30.03■■■□□ 2.4
PMS2P3-201ENST00000394921 UBN2Q6ZU65 1347 aa30.03■■■□□ 2.4
PMS2P3-201ENST00000394921 TNRC6CQ9HCJ0 1690 aaKnown RBP30.02■■■□□ 2.4
PMS2P3-201ENST00000394921 PRPF40BQ6NWY9 871 aaKnown RBP30.02■■■□□ 2.4
PMS2P3-201ENST00000394921 GIGYF2Q6Y7W6 1299 aaKnown RBP30.02■■■□□ 2.4
PMS2P3-201ENST00000394921 ABCC12Q96J65 1359 aa30.02■■■□□ 2.4
PMS2P3-201ENST00000394921 GPTP24298 496 aa30.01■■■□□ 2.4
PMS2P3-201ENST00000394921 ZNF34Q8IZ26 560 aa30.01■■■□□ 2.4
PMS2P3-201ENST00000394921 NECTIN2Q92692 538 aa30.01■■■□□ 2.4
PMS2P3-201ENST00000394921 CFAP44Q96MT7 982 aa30.01■■■□□ 2.4
PMS2P3-201ENST00000394921 NPR1P16066 1061 aa30■■■□□ 2.39
PMS2P3-201ENST00000394921 IBTKQ9P2D0 1353 aaPredicted RBP30■■■□□ 2.39
PMS2P3-201ENST00000394921 NUTM1Q86Y26 1132 aa29.99■■■□□ 2.39
PMS2P3-201ENST00000394921 NYXQ9GZU5 481 aa29.99■■■□□ 2.39
PMS2P3-201ENST00000394921 ZC3H4Q9UPT8 1303 aaKnown RBP29.99■■■□□ 2.39
PMS2P3-201ENST00000394921 ZNF853P0CG23 659 aa29.98■■■□□ 2.39
PMS2P3-201ENST00000394921 SUSD4Q5VX71 490 aa29.98■■■□□ 2.39
PMS2P3-201ENST00000394921 C7orf43Q8WVR3 580 aa29.98■■■□□ 2.39
PMS2P3-201ENST00000394921 TIAM2Q8IVF5 1701 aa29.98■■■□□ 2.39
PMS2P3-201ENST00000394921 GTF2E1P29083 439 aaPredicted RBP29.97■■■□□ 2.39
PMS2P3-201ENST00000394921 ERFEQ4G0M1 354 aa29.97■■■□□ 2.39
PMS2P3-201ENST00000394921 DDX21Q9NR30 783 aaKnown RBP eCLIP29.97■■■□□ 2.39
PMS2P3-201ENST00000394921 DICER1Q9UPY3 1922 aaKnown RBP29.97■■■□□ 2.39
PMS2P3-201ENST00000394921 MBIPQ9NS73 344 aa29.96■■■□□ 2.39
PMS2P3-201ENST00000394921 HOXB7P09629 217 aa29.96■■■□□ 2.39
PMS2P3-201ENST00000394921 COPS6Q7L5N1 327 aa29.96■■■□□ 2.39
PMS2P3-201ENST00000394921 XAGE3Q8WTP9 111 aa29.96■■■□□ 2.39
PMS2P3-201ENST00000394921 KDM2BQ8NHM5 1336 aa29.95■■■□□ 2.39
PMS2P3-201ENST00000394921 LTBP3Q9NS15 1303 aa29.95■■■□□ 2.39
PMS2P3-201ENST00000394921 RIC1Q4ADV7 1423 aa29.95■■■□□ 2.39
PMS2P3-201ENST00000394921 NTSR2O95665 410 aa29.95■■■□□ 2.38
PMS2P3-201ENST00000394921 CRY2Q49AN0 593 aa29.95■■■□□ 2.38
PMS2P3-201ENST00000394921 ANKRD36CQ5JPF3 1778 aa29.94■■■□□ 2.38
PMS2P3-201ENST00000394921 CHPF2Q9P2E5 772 aa29.94■■■□□ 2.38
PMS2P3-201ENST00000394921 AIMP1Q12904 312 aaKnown RBP29.93■■■□□ 2.38
PMS2P3-201ENST00000394921 PARP10Q53GL7 1025 aa29.93■■■□□ 2.38
PMS2P3-201ENST00000394921 SOGA3Q5TF21 947 aa29.93■■■□□ 2.38
PMS2P3-201ENST00000394921 HDGFL1Q5TGJ6 251 aa29.93■■■□□ 2.38
PMS2P3-201ENST00000394921 TAOK3Q9H2K8 898 aa29.93■■■□□ 2.38
PMS2P3-201ENST00000394921 IFT57Q9NWB7 429 aa29.93■■■□□ 2.38
PMS2P3-201ENST00000394921 TOMM70O94826 608 aa29.91■■■□□ 2.38
PMS2P3-201ENST00000394921 DUSP27Q5VZP5 1158 aa29.91■■■□□ 2.38
PMS2P3-201ENST00000394921 RRAGCQ9HB90 399 aa29.9■■■□□ 2.38
PMS2P3-201ENST00000394921 CEP350Q5VT06 3117 aa29.9■■■□□ 2.38
PMS2P3-201ENST00000394921 GLTPD2A6NH11 291 aa29.89■■■□□ 2.38
PMS2P3-201ENST00000394921 HSPA6P17066 643 aa29.89■■■□□ 2.38
PMS2P3-201ENST00000394921 GNAI1P63096 354 aa29.89■■■□□ 2.38
PMS2P3-201ENST00000394921 CALD1Q05682 793 aaKnown RBP29.89■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms