RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FAXDC2Q96IV6 333 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 ARFGAP3Q9NP61 516 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 DACT1Q9NYF0 836 aa14.67□□□□□ -0.06
SLC28A1-203ENST00000394573 AATKQ6ZMQ8 1374 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 FRMD3A2A2Y4 597 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 ERLIN2O94905 339 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 F13A1P00488 732 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 ATP2B2Q01814 1243 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 EFCAB13Q8IY85 973 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 AKAP2Q9Y2D5 859 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 WWC2Q6AWC2 1192 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 JMYQ8N9B5 988 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 BICC1Q9H694 974 aaKnown RBP14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 ANO2Q9NQ90 1003 aa14.66□□□□□ -0.06
SLC28A1-203ENST00000394573 TADA3O75528 432 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 IFIT2P09913 472 aaKnown RBP14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 GBP6Q6ZN66 633 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 ELP1O95163 1332 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 PRDM15P57071 1507 aaPredicted RBP14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 VPS37CA5D8V6 355 aaPredicted RBP14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 ELL2O00472 640 aaPredicted RBP14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 FERMT3Q86UX7 667 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 MIEF2Q96C03 454 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 RABEP2Q9H5N1 569 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 ZSWIM4Q9H7M6 989 aa14.65□□□□□ -0.06
SLC28A1-203ENST00000394573 TDRD7Q8NHU6 1098 aaKnown RBP14.64□□□□□ -0.07
SLC28A1-203ENST00000394573 CFDP1Q9UEE9 299 aaPredicted RBP14.64□□□□□ -0.07
SLC28A1-203ENST00000394573 CPP00450 1065 aa14.64□□□□□ -0.07
SLC28A1-203ENST00000394573 MCM2P49736 904 aa14.64□□□□□ -0.07
SLC28A1-203ENST00000394573 MORC1Q86VD1 984 aa14.64□□□□□ -0.07
SLC28A1-203ENST00000394573 GOLGA6L19H0YKK7 550 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 KIRREL3Q8IZU9 778 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 N4BP2L2Q92802 583 aaPredicted RBP14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 SUGCTQ9HAC7 445 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 NESP48681 1621 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 POLA1P09884 1462 aaPredicted RBP14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 FANCGO15287 622 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 GNAI3P08754 354 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 ARMC3Q5W041 872 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 PARD6BQ9BYG5 372 aa14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 CFAP65Q6ZU64 1925 aaKnown RBP14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 SCAF11Q99590 1463 aaKnown RBP14.63□□□□□ -0.07
SLC28A1-203ENST00000394573 A0A087WUV0 522 aaPredicted RBP14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 MTHFSP49914 203 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 LONRF2Q1L5Z9 754 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 ERCC6Q03468 1493 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 NOS1P29475 1434 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 CCDC158Q5M9N0 1113 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 TTC6Q86TZ1 520 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 ZNF513Q8N8E2 541 aaPredicted RBP14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 CLIC6Q96NY7 704 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 A2MP01023 1474 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 IQSEC2Q5JU85 1478 aa14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 SKAP2O75563 359 aaPredicted RBP14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.074e-10■■■■■ 32
SLC28A1-203ENST00000394573 RBM28Q9NW13 759 aaKnown RBP14.62□□□□□ -0.07
SLC28A1-203ENST00000394573 CAND2O75155 1236 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 SCRN1Q12765 414 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 CNNM3Q8NE01 707 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 CD248Q9HCU0 757 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 ATP8B1O43520 1251 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 ELF1P32519 619 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 C11orf91Q3C1V1 193 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 GNL3LQ9NVN8 582 aaKnown RBP14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 IRAK4Q9NWZ3 460 aa14.61□□□□□ -0.07
SLC28A1-203ENST00000394573 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 NEMFO60524 1076 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 ARID4AP29374 1257 aaPredicted RBP14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 TRDNQ13061 729 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 KLHL33A6NCF5 533 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 SSR1P43307 286 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 APOBRQ0VD83 1088 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 CCDC102AQ96A19 550 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 SMC3Q9UQE7 1217 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 UHRF1BP1LA0JNW5 1464 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 SYNMO15061 1565 aa14.6□□□□□ -0.07
SLC28A1-203ENST00000394573 CT47B1P0C2W7 299 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 NBPF10Q6P3W6 841 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 CTCFLQ8NI51 663 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 MKRN1Q9UHC7 482 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 KANK1Q14678 1352 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 EME2A4GXA9 379 aaPredicted RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 GOLGA6L4A6NEF3 574 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 EXOC5O00471 708 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 SRGAP3O43295 1099 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 CPA1P15085 419 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 CALRP27797 417 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 GNAI1P63096 354 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 PIK3R5Q8WYR1 880 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 THOC1Q96FV9 657 aaKnown RBP14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 PRAM1Q96QH2 718 aa14.59□□□□□ -0.07
SLC28A1-203ENST00000394573 EIF4G3O43432 1585 aaKnown RBP14.58□□□□□ -0.07
SLC28A1-203ENST00000394573 CCNHP51946 323 aaPredicted RBP14.58□□□□□ -0.07
SLC28A1-203ENST00000394573 TBC1D22AQ8WUA7 517 aa14.58□□□□□ -0.07
SLC28A1-203ENST00000394573 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.07
SLC28A1-203ENST00000394573 ETF1P62495 437 aaKnown RBP14.58□□□□□ -0.08
SLC28A1-203ENST00000394573 NBPF9Q3BBW0 867 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms