RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 SMG6Q86US8 1419 aaKnown RBP15.37■□□□□ 0.05
USP49-203ENST00000394253 SURF6O75683 361 aaKnown RBP15.37■□□□□ 0.05
USP49-203ENST00000394253 STXBP4Q6ZWJ1 553 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 CARMIL2Q6F5E8 1435 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 APAF1O14727 1248 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 MCM6Q14566 821 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 MIER3Q7Z3K6 550 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 FLIIQ13045 1269 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 ARFGAP2Q8N6H7 521 aa15.37■□□□□ 0.05
USP49-203ENST00000394253 CCDC63Q8NA47 563 aa15.36■□□□□ 0.05
USP49-203ENST00000394253 TXNDC16Q9P2K2 825 aa15.36■□□□□ 0.05
USP49-203ENST00000394253 CAMK4Q16566 473 aa15.36■□□□□ 0.05
USP49-203ENST00000394253 DDX27Q96GQ7 796 aaKnown RBP15.36■□□□□ 0.05
USP49-203ENST00000394253 PDRG1Q9NUG6 133 aa15.36■□□□□ 0.05
USP49-203ENST00000394253 DNAJC8O75937 253 aaPredicted RBP15.36■□□□□ 0.05
USP49-203ENST00000394253 CLNS1AP54105 237 aaKnown RBP15.36■□□□□ 0.05
USP49-203ENST00000394253 AMPD3Q01432 767 aa15.36■□□□□ 0.05
USP49-203ENST00000394253 ERCC3P19447 782 aa15.36■□□□□ 0.05
USP49-203ENST00000394253 SH3BP5O60239 455 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 PANK1Q8TE04 598 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 CCDC12Q8WUD4 166 aaPredicted RBP15.35■□□□□ 0.05
USP49-203ENST00000394253 NEDD9Q14511 834 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 KANK3Q6NY19 840 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 CTCFLQ8NI51 663 aaPredicted RBP15.35■□□□□ 0.05
USP49-203ENST00000394253 U3KPZ7 1027 aaPredicted RBP15.35■□□□□ 0.05
USP49-203ENST00000394253 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 TRPC3Q13507 836 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 ARHGAP24Q8N264 748 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
USP49-203ENST00000394253 XPCQ01831 940 aaPredicted RBP15.35■□□□□ 0.05
USP49-203ENST00000394253 NBPF11Q86T75 865 aa15.35■□□□□ 0.05
USP49-203ENST00000394253 CTAGE1Q96RT6 745 aa15.34■□□□□ 0.05
USP49-203ENST00000394253 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
USP49-203ENST00000394253 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
USP49-203ENST00000394253 INTS8Q75QN2 995 aaKnown RBP15.34■□□□□ 0.05
USP49-203ENST00000394253 CEP85LQ5SZL2 805 aa15.34■□□□□ 0.05
USP49-203ENST00000394253 GOLGA1Q92805 767 aa15.34■□□□□ 0.05
USP49-203ENST00000394253 HVCN1Q96D96 273 aa15.34■□□□□ 0.05
USP49-203ENST00000394253 CCDC38Q502W7 563 aa15.33■□□□□ 0.05
USP49-203ENST00000394253 CASTP20810 708 aaKnown RBP15.33■□□□□ 0.05
USP49-203ENST00000394253 CCT4P50991 539 aaKnown RBP15.33■□□□□ 0.05
USP49-203ENST00000394253 CCDC94Q9BW85 323 aaPredicted RBP15.33■□□□□ 0.05
USP49-203ENST00000394253 CNNM1Q9NRU3 951 aa15.33■□□□□ 0.05
USP49-203ENST00000394253 IRX4P78413 519 aa15.33■□□□□ 0.04
USP49-203ENST00000394253 TMEM87AQ8NBN3 555 aa15.33■□□□□ 0.04
USP49-203ENST00000394253 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
USP49-203ENST00000394253 FAM76AQ8TAV0 307 aa15.33■□□□□ 0.04
USP49-203ENST00000394253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.33■□□□□ 0.04
USP49-203ENST00000394253 USP37Q86T82 979 aa15.33■□□□□ 0.04
USP49-203ENST00000394253 SH2B1Q9NRF2 756 aaPredicted RBP15.33■□□□□ 0.04
USP49-203ENST00000394253 LRCH2Q5VUJ6 765 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 SYNCQ9H7C4 482 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 TACC3Q9Y6A5 838 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 GNG11P61952 73 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 RSPH3Q86UC2 560 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 VPS52Q8N1B4 723 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 BICDL2A1A5D9 508 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 FYB2Q5VWT5 728 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 PDE3AQ14432 1141 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 TAOK1Q7L7X3 1001 aa15.32■□□□□ 0.04
USP49-203ENST00000394253 A0A087WZG4 1122 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 AFAP1L2Q8N4X5 818 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 STRN4Q9NRL3 753 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 USP25Q9UHP3 1055 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 CTAGE15A4D2H0 777 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 CTAGE8P0CG41 777 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 MTIF2P46199 727 aaKnown RBP15.31■□□□□ 0.04
USP49-203ENST00000394253 CTAGE4Q8IX94 777 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 ARHGAP25P42331 645 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 CCDC62Q6P9F0 684 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 ST20-MTHFSA0A0A6YYL1 179 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 GAS8O95995 478 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
USP49-203ENST00000394253 CNTLNQ9NXG0 1405 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 TMC6Q7Z403 805 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 ANKRD24Q8TF21 1146 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 L3MBTL2Q969R5 705 aa15.31■□□□□ 0.04
USP49-203ENST00000394253 SEC62Q99442 399 aaKnown RBP15.31■□□□□ 0.04
USP49-203ENST00000394253 BRD4O60885 1362 aaPredicted RBP15.31■□□□□ 0.04
USP49-203ENST00000394253 ZEB2O60315 1214 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 ADCY5O95622 1261 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 SETD1BQ9UPS6 1966 aaKnown RBP15.3■□□□□ 0.04
USP49-203ENST00000394253 SPAG5Q96R06 1193 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 UBA5Q9GZZ9 404 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 RBBP5Q15291 538 aaKnown RBP15.3■□□□□ 0.04
USP49-203ENST00000394253 BCAP29Q9UHQ4 241 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 RNF8O76064 485 aa15.3■□□□□ 0.04
USP49-203ENST00000394253 AP1ARQ63HQ0 302 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 CHMP2AO43633 222 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 ERCC5P28715 1186 aaPredicted RBP15.29■□□□□ 0.04
USP49-203ENST00000394253 CYLC1P35663 651 aaPredicted RBP15.29■□□□□ 0.04
USP49-203ENST00000394253 WASHC2CQ9Y4E1 1318 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 VAV2P52735 878 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 RUFY3Q7L099 469 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 HDXQ7Z353 690 aa15.29■□□□□ 0.04
USP49-203ENST00000394253 LMBR1Q8WVP7 490 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms