RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 TSPYL6Q8N831 410 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 RHPN1Q8TCX5 695 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 MED14O60244 1454 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 NPATQ14207 1427 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 SKILP12757 684 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 RRS1Q15050 365 aaKnown RBP10.07□□□□□ -0.8
GABRA1-202ENST00000393943 HSPA4P34932 840 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 MCM10Q7L590 875 aa10.07□□□□□ -0.8
GABRA1-202ENST00000393943 TUBBP07437 444 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
GABRA1-202ENST00000393943 TAF7LQ5H9L4 462 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 CKAP2LQ8IYA6 745 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 CEP152O94986 1710 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 CCDC47Q96A33 483 aaKnown RBP10.06□□□□□ -0.8
GABRA1-202ENST00000393943 CD109Q6YHK3 1445 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 AK2P54819 239 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 IDI1Q13907 227 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 RIC3Q7Z5B4 369 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 IVLP07476 585 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 DNM1Q05193 864 aaKnown RBP10.06□□□□□ -0.8
GABRA1-202ENST00000393943 FERMT3Q86UX7 667 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 NME9Q86XW9 330 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 DACT1Q9NYF0 836 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 IMPACTQ9P2X3 320 aa10.06□□□□□ -0.8
GABRA1-202ENST00000393943 UHRF1BP1LA0JNW5 1464 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 CPSF1Q10570 1443 aaKnown RBP10.05□□□□□ -0.8
GABRA1-202ENST00000393943 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 CYP2E1P05181 493 aaPredicted RBP10.05□□□□□ -0.8
GABRA1-202ENST00000393943 PTGS1P23219 599 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 MLECQ14165 292 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 DCTN1Q14203 1278 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 IQCEQ6IPM2 695 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 DNAAF4Q8WXU2 420 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
GABRA1-202ENST00000393943 RUFY1Q96T51 708 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
GABRA1-202ENST00000393943 CHL1O00533 1208 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 PPFIBP1Q86W92 1011 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 PDILTQ8N807 584 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 RTL1A6NKG5 1358 aa10.05□□□□□ -0.8
GABRA1-202ENST00000393943 ERICH4A6NGS2 130 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
GABRA1-202ENST00000393943 GTF2F1P35269 517 aaKnown RBP eCLIP10.04□□□□□ -0.8
GABRA1-202ENST00000393943 MAP9Q49MG5 647 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 FMNL2Q96PY5 1086 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 CLSTN2Q9H4D0 955 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 F6X3S4 739 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 XBP1P17861 261 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 IL13P35225 146 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 CDR1P51861 262 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 AATKQ6ZMQ8 1374 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
GABRA1-202ENST00000393943 CASQ1P31415 396 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 ZNF75DP51815 510 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 PPP1R42Q7Z4L9 355 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 ELP1O95163 1332 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 TTC21AQ8NDW8 1320 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 ARHGAP31Q2M1Z3 1444 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 SGSM2O43147 1006 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 CDC25BP30305 580 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 STK3Q13188 491 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 RUFY3Q7L099 469 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 TTC5Q8N0Z6 440 aa10.04□□□□□ -0.8
GABRA1-202ENST00000393943 ALDH1L1O75891 902 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 TOP1P11387 765 aaKnown RBP10.03□□□□□ -0.8
GABRA1-202ENST00000393943 STAP2Q9UGK3 403 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 ATP7BP35670 1465 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 NLRP6P59044 892 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 KCNG4Q8TDN1 519 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 SPTLC3Q9NUV7 552 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 ARHGEF10O15013 1369 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 NPHP1O15259 732 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 MYO1BO43795 1136 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 URI1O94763 535 aaPredicted RBP10.03□□□□□ -0.8
GABRA1-202ENST00000393943 CALRP27797 417 aaKnown RBP10.03□□□□□ -0.8
GABRA1-202ENST00000393943 CFAP100Q494V2 611 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 CCAR1Q8IX12 1150 aaKnown RBP10.03□□□□□ -0.8
GABRA1-202ENST00000393943 FSIP1Q8NA03 581 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 KIAA1524Q8TCG1 905 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 WASF1Q92558 559 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 PHACTR3Q96KR7 559 aa10.03□□□□□ -0.8
GABRA1-202ENST00000393943 SLC3A2P08195 630 aaKnown RBP10.02□□□□□ -0.8
GABRA1-202ENST00000393943 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.8
GABRA1-202ENST00000393943 ARFGAP3Q9NP61 516 aa10.02□□□□□ -0.8
GABRA1-202ENST00000393943 EFCAB6Q5THR3 1501 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 ZNF853P0CG23 659 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 TUBB2AQ13885 445 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 TUBB2BQ9BVA1 445 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 SPG7Q9UQ90 795 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 LMOD2Q6P5Q4 547 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 BBXQ8WY36 941 aaPredicted RBP10.02□□□□□ -0.81
GABRA1-202ENST00000393943 NEK1Q96PY6 1258 aa10.02□□□□□ -0.81
GABRA1-202ENST00000393943 LLPHQ9BRT6 129 aaKnown RBP10.02□□□□□ -0.81
GABRA1-202ENST00000393943 DBF4Q9UBU7 674 aaPredicted RBP10.02□□□□□ -0.81
GABRA1-202ENST00000393943 ERICH2A1L162 156 aa10.01□□□□□ -0.81
GABRA1-202ENST00000393943 FAM83GA6ND36 823 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms