RNA–Protein interactions for RNA: ENST00000392520.2

CIT-202, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 5,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-202ENST00000392520 MINDY4BA8MYZ0 360 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 ZSCAN22P10073 491 aaPredicted RBP17.21■□□□□ 0.35
CIT-202ENST00000392520 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.35
CIT-202ENST00000392520 MAP3K12Q12852 859 aa17.21■□□□□ 0.35
CIT-202ENST00000392520 HDAC1Q13547 482 aaPredicted RBP17.21■□□□□ 0.35
CIT-202ENST00000392520 F6X3S4 739 aa17.21■□□□□ 0.34
CIT-202ENST00000392520 CCT2P78371 535 aaKnown RBP17.2■□□□□ 0.34
CIT-202ENST00000392520 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
CIT-202ENST00000392520 DNA2P51530 1060 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 CCDC85AQ96PX6 553 aaPredicted RBP17.2■□□□□ 0.34
CIT-202ENST00000392520 TMX1Q9H3N1 280 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 ARFGAP3Q9NP61 516 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 FAM114A1Q8IWE2 563 aa17.2■□□□□ 0.34
CIT-202ENST00000392520 HS1BP3Q53T59 392 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 GIMAP6Q6P9H5 292 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 TICAM2Q86XR7 235 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 IFIT3O14879 490 aaKnown RBP17.19■□□□□ 0.34
CIT-202ENST00000392520 IVLP07476 585 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 ZSCAN29Q8IWY8 852 aaPredicted RBP17.19■□□□□ 0.34
CIT-202ENST00000392520 KCNH5Q8NCM2 988 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 HOOK3Q86VS8 718 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 USP16Q9Y5T5 823 aa17.19■□□□□ 0.34
CIT-202ENST00000392520 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 STARD3NLO95772 234 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 SKILP12757 684 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 IARSP41252 1262 aaKnown RBP17.18■□□□□ 0.34
CIT-202ENST00000392520 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.342e-8■■■■■ 28.8
CIT-202ENST00000392520 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 AMPD3Q01432 767 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 LARP6Q9BRS8 491 aaKnown RBP17.18■□□□□ 0.34
CIT-202ENST00000392520 IL16Q14005 1332 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 TNIP1Q15025 636 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 SNX21Q969T3 373 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 MYD88Q99836 296 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.18■□□□□ 0.34
CIT-202ENST00000392520 ORC3Q9UBD5 711 aaPredicted RBP17.18■□□□□ 0.34
CIT-202ENST00000392520 NEBLO76041 1014 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 NUCB1Q02818 461 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 CKAP4Q07065 602 aaKnown RBP17.18■□□□□ 0.34
CIT-202ENST00000392520 NEK1Q96PY6 1258 aa17.18■□□□□ 0.34
CIT-202ENST00000392520 SRRTQ9BXP5 876 aaKnown RBP17.18■□□□□ 0.34
CIT-202ENST00000392520 FLIIQ13045 1269 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 MAATS1Q7Z4T9 603 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 IPO4Q8TEX9 1081 aaKnown RBP17.17■□□□□ 0.34
CIT-202ENST00000392520 RBM5P52756 815 aaKnown RBP eCLIP17.17■□□□□ 0.34
CIT-202ENST00000392520 CEP112Q8N8E3 955 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
CIT-202ENST00000392520 STAMBPO95630 424 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 MNAT1P51948 309 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 NLRP5P59047 1200 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 JADE2Q9NQC1 790 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 ANAPC15P60006 121 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 CAVIN4Q5BKX8 364 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 CCDC186Q7Z3E2 898 aa17.17■□□□□ 0.34
CIT-202ENST00000392520 NCAPD3P42695 1498 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 A0A087WZG4 1122 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 TMCO5BA8MYB1 307 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 HYPKQ9NX55 129 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 GPATCH11Q8N954 259 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 RANBP6O60518 1105 aaKnown RBP17.16■□□□□ 0.34
CIT-202ENST00000392520 IFIT5Q13325 482 aaKnown RBP17.16■□□□□ 0.34
CIT-202ENST00000392520 CATIPQ7Z7H3 387 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 UBA5Q9GZZ9 404 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 ZSWIM4Q9H7M6 989 aa17.16■□□□□ 0.34
CIT-202ENST00000392520 UBASH3AP57075 661 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 CETN1Q12798 172 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 PRDM11Q9NQV5 511 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 GOLIM4O00461 696 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 HSF2BPO75031 334 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 KLHL34Q8N239 644 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 CTNNBL1Q8WYA6 563 aaPredicted RBP17.15■□□□□ 0.34
CIT-202ENST00000392520 NSD2O96028 1365 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 CTAGE15A4D2H0 777 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 N4BP3O15049 544 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 POLR3DP05423 398 aaPredicted RBP17.15■□□□□ 0.34
CIT-202ENST00000392520 CTAGE8P0CG41 777 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 TRIM21P19474 475 aaKnown RBP17.15■□□□□ 0.34
CIT-202ENST00000392520 CTAGE6Q86UF2 777 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 CTAGE4Q8IX94 777 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 NF2P35240 595 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 UBE4AQ14139 1066 aa17.15■□□□□ 0.34
CIT-202ENST00000392520 MPHOSPH10O00566 681 aaKnown RBP17.14■□□□□ 0.33
CIT-202ENST00000392520 SLU7O95391 586 aaKnown RBP17.14■□□□□ 0.33
CIT-202ENST00000392520 CCDC40Q4G0X9 1142 aa17.14■□□□□ 0.33
CIT-202ENST00000392520 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
CIT-202ENST00000392520 CALML4Q96GE6 196 aa17.14■□□□□ 0.33
CIT-202ENST00000392520 ZNF830Q96NB3 372 aaPredicted RBP17.14■□□□□ 0.33
CIT-202ENST00000392520 CTAGE1Q96RT6 745 aa17.14■□□□□ 0.33
CIT-202ENST00000392520 PANK2Q9BZ23 570 aa17.14■□□□□ 0.33
CIT-202ENST00000392520 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
CIT-202ENST00000392520 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.14■□□□□ 0.335e-7■■■□□ 17.2
CIT-202ENST00000392520 SYKP43405 635 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms