RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 EIF1AYO14602 144 aaKnown RBP3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 TNFRSF10BO14763 440 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 CPNE3O75131 537 aaKnown RBP3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 IGHA2P01877 340 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 RPLP1P05386 114 aaKnown RBP3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 MMP16P51512 607 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 PPP4CP60510 307 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 C8orf34Q49A92 452 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 PLEKHG4Q58EX7 1191 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 ANKS3Q6ZW76 656 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 STAG2Q8N3U4 1231 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 CPLX3Q8WVH0 158 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 JDP2Q8WYK2 163 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 APPBP2Q92624 585 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 THAP11Q96EK4 314 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 NGLY1Q96IV0 654 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 SPSB2Q99619 263 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 SPON2Q9BUD6 331 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 C12orf49Q9H741 205 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 PRDM16Q9HAZ2 1276 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 FAM13BQ9NYF5 915 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 FAM8A1Q9UBU6 413 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 TCEAL9Q9UHQ7 104 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 STRIP2Q9ULQ0 834 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 V9GY48 417 aaPredicted RBP3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 USP31Q70CQ4 1352 aa3.38□□□□□ -1.87
RNU6-220P-201ENST00000390919 A0A1W2PRU2 124 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 CCDC85CA6NKD9 419 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 WASLO00401 505 aaPredicted RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ARHGAP33O14559 1287 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZPR1O75312 459 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 PDGFAP04085 211 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 INHAP05111 366 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZAP70P43403 619 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 NASPP49321 788 aaPredicted RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ST13P50502 369 aaKnown RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 PSMA6P60900 246 aaKnown RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 IFRD2Q12894 506 aaPredicted RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ORC1Q13415 861 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 SERINC3Q13530 473 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 PWP1Q13610 501 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 LINC01559Q495D7 138 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ESCO1Q5FWF5 840 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ARSHQ5FYA8 562 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ODR4Q5SWX8 454 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 TMED8Q6PL24 325 aaPredicted RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 SH3RF1Q7Z6J0 888 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 FERMT3Q86UX7 667 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 HOMER1Q86YM7 354 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 KIAA0825Q8IV33 1275 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 SLC9A9Q8IVB4 645 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 FMNL3Q8IVF7 1028 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 SMC5Q8IY18 1101 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 MRPL50Q8N5N7 158 aaKnown RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 NKX2-3Q8TAU0 364 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 RASGRP4Q8TDF6 673 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 MYO19Q96H55 970 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 RNPC3Q96LT9 517 aaKnown RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 DEPDC7Q96QD5 511 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 C2orf49Q9BVC5 232 aaPredicted RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZNF408Q9H9D4 720 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 TYW1Q9NV66 732 aaKnown RBP3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 FANCLQ9NW38 375 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 SNTG2Q9NY99 539 aa3.37□□□□□ -1.87
RNU6-220P-201ENST00000390919 OPLAHO14841 1288 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 PRC1O43663 620 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 PDGFRBP09619 1106 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 OS9Q13438 667 aaPredicted RBP3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 TBCELQ5QJ74 424 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 MEI1Q5TIA1 1274 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 LRP10Q7Z4F1 713 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 NBPF15Q8N660 670 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 SH3TC2Q8TF17 1288 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 BAP1Q92560 729 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 FOXJ1Q92949 421 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 KCTD15Q96SI1 283 aaPredicted RBP3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 SPOCK3Q9BQ16 436 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 CFHR5Q9BXR6 569 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 SRCIN1Q9C0H9 1055 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 QTRT2Q9H974 415 aaKnown RBP3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 PRDM9Q9NQV7 894 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 GEMIN8Q9NWZ8 242 aaKnown RBP3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 GABBR1Q9UBS5 961 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZNF232Q9UNY5 417 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 MRVI1Q9Y6F6 885 aa3.36□□□□□ -1.87
RNU6-220P-201ENST00000390919 A6NJY4 79 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 GOLGA8CPA6NN73 597 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 ERVH48-1M5A8F1 160 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZBTB39O15060 712 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 SNPHO15079 494 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 CREB3O43889 395 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 PLIN1O60240 522 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 GABBR2O75899 941 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 USP17L7P0C7H9 530 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 HOXB1P14653 301 aaPredicted RBP3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 SCTRP47872 440 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 SCNN1DP51172 638 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 EPHA4P54764 986 aa3.35□□□□□ -1.87
RNU6-220P-201ENST00000390919 TBX4P57082 545 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms