RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 EDEM1Q92611 657 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 OSBPL3Q9H4L5 887 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 ETNK1Q9HBU6 452 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 SCHIP1Q9P0W5 487 aaPredicted RBP2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 SERTAD1Q9UHV2 236 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 GGT7Q9UJ14 662 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 LRFN2Q9ULH4 789 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 PCDHGB7Q9Y5F8 929 aa2.36□□□□□ -2.03
TRAJ39-201ENST00000390498 K7ELQ4 463 aaPredicted RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 CPNE3O75131 537 aaKnown RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 ZPR1O75312 459 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 PDGFAP04085 211 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 ZAP70P43403 619 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 BCAMP50895 628 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 HIRAP54198 1017 aaPredicted RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 RAB15P59190 212 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SH3BP2P78314 561 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 PAK2Q13177 524 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SERINC3Q13530 473 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 TAF1CQ15572 869 aaPredicted RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 RTN1Q16799 776 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 LINC01559Q495D7 138 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 INTS6LQ5JSJ4 861 aaKnown RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 VASH1Q7L8A9 365 aaPredicted RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 CYP2U1Q7Z449 544 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 ATCAYQ86WG3 371 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 TTC16Q8NEE8 873 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SP7Q8TDD2 431 aaPredicted RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 GPRASP2Q96D09 838 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SEC16BQ96JE7 1060 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 STAC3Q96MF2 364 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SRCIN1Q9C0H9 1055 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SLC6A16Q9GZN6 736 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 C12orf49Q9H741 205 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 FAM13BQ9NYF5 915 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SIRPGQ9P1W8 387 aa2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 DMGDHQ9UI17 866 aaKnown RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 MRPL42Q9Y6G3 142 aaKnown RBP2.35□□□□□ -2.03
TRAJ39-201ENST00000390498 SERTM1A2A2V5 107 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 PLEKHD1A6NEE1 506 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 POTEB2H3BUK9 544 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 OPLAHO14841 1288 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 HRO43593 1189 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 VARSP26640 1264 aaKnown RBP2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 WNT7BP56706 349 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 COPS2P61201 443 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 NFX1Q12986 1120 aaKnown RBP2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 ORC1Q13415 861 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 TEAD4Q15561 434 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 FAM26DQ5JW98 314 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 TBCELQ5QJ74 424 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 ADGRD1Q6QNK2 874 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 NYAP1Q6ZVC0 841 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 ERMP1Q7Z2K6 904 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 LRP10Q7Z4F1 713 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 ETFBKMTQ8IXQ9 262 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 NBPF15Q8N660 670 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 WNT2BQ93097 391 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 IFT43Q96FT9 208 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 XAGE2Q96GT9 111 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 IFT57Q9NWB7 429 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 FAM8A1Q9UBU6 413 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 STRIP2Q9ULQ0 834 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 PRKAB1Q9Y478 270 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 PPME1Q9Y570 386 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 COL4A3BPQ9Y5P4 624 aa2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 V9GY48 417 aaPredicted RBP2.34□□□□□ -2.03
TRAJ39-201ENST00000390498 POTECB2RU33 542 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 EML1O00423 815 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 PPP1R12AO14974 1030 aaPredicted RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 TLL1O43897 1013 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 DNAJC6O75061 913 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 STAU1O95793 577 aaKnown RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 SSBP05455 408 aaKnown RBP eCLIP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 NOS2P35228 1153 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 LSM11P83369 360 aaKnown RBP eCLIP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 DGKZQ13574 1117 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 PWP1Q13610 501 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 COL9A2Q14055 689 aaPredicted RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 HIF1AQ16665 826 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 C8orf34Q49A92 452 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 PLEKHG4Q58EX7 1191 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 C1orf53Q5VUE5 145 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 XKR5Q6UX68 686 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 FILIP1Q7Z7B0 1213 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 DHX37Q8IY37 1157 aaKnown RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 ALDH16A1Q8IZ83 802 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 CCDC74AQ96AQ1 378 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 NUDT16Q96DE0 195 aaKnown RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 NGLY1Q96IV0 654 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 CDK15Q96Q40 435 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 RSRP1Q9BUV0 290 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 NOC4LQ9BVI4 516 aaKnown RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 OSBPL7Q9BZF2 842 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 SLKQ9H2G2 1235 aaPredicted RBP2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 GGNBP2Q9H3C7 697 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 SPC25Q9HBM1 224 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 NEUROD4Q9HD90 331 aa2.33□□□□□ -2.04
TRAJ39-201ENST00000390498 PCDH12Q9NPG4 1184 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms