RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 C1QTNF8P60827 252 aa10.67□□□□□ -0.7
TRAV6-201ENST00000390428 MSL1Q68DK7 614 aa10.67□□□□□ -0.7
TRAV6-201ENST00000390428 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
TRAV6-201ENST00000390428 WASHC2AQ641Q2 1341 aa10.66□□□□□ -0.7
TRAV6-201ENST00000390428 PPM1GO15355 546 aaPredicted RBP10.66□□□□□ -0.7
TRAV6-201ENST00000390428 PIGBQ92521 554 aa10.66□□□□□ -0.7
TRAV6-201ENST00000390428 SMARCC1Q92922 1105 aaPredicted RBP10.66□□□□□ -0.7
TRAV6-201ENST00000390428 GRIN3BO60391 1043 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 COL9A1P20849 921 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 KCNV2Q8TDN2 545 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 EYA1Q99502 592 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 TIMELESSQ9UNS1 1208 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
TRAV6-201ENST00000390428 SENP3-EIF4A1A0A087X0R7 540 aa10.64□□□□□ -0.71
TRAV6-201ENST00000390428 PPP1R3GB7ZBB8 358 aa10.64□□□□□ -0.71
TRAV6-201ENST00000390428 AK7Q96M32 723 aa10.64□□□□□ -0.71
TRAV6-201ENST00000390428 CD2APQ9Y5K6 639 aa10.64□□□□□ -0.71
TRAV6-201ENST00000390428 LOC102724428A0A0B4J2F2 783 aa10.63□□□□□ -0.71
TRAV6-201ENST00000390428 BHMG1C9JSJ3 638 aaPredicted RBP10.63□□□□□ -0.71
TRAV6-201ENST00000390428 GIGYF1O75420 1035 aaPredicted RBP10.63□□□□□ -0.71
TRAV6-201ENST00000390428 SIK1P57059 783 aa10.63□□□□□ -0.71
TRAV6-201ENST00000390428 NBR1Q14596 966 aa10.63□□□□□ -0.71
TRAV6-201ENST00000390428 AMIGO3Q86WK7 504 aa10.63□□□□□ -0.71
TRAV6-201ENST00000390428 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
TRAV6-201ENST00000390428 POLKQ9UBT6 870 aa10.63□□□□□ -0.71
TRAV6-201ENST00000390428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.62□□□□□ -0.71
TRAV6-201ENST00000390428 TMOD3Q9NYL9 352 aa10.62□□□□□ -0.71
TRAV6-201ENST00000390428 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 PHKG2P15735 406 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 SSFA2P28290 1259 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 IFNL2Q8IZJ0 200 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 LINC00116Q8NCU8 138 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 ASAP1Q9ULH1 1129 aa10.61□□□□□ -0.71
TRAV6-201ENST00000390428 ATP6V1AP38606 617 aa10.6□□□□□ -0.71
TRAV6-201ENST00000390428 ITPK1Q13572 414 aa10.6□□□□□ -0.71
TRAV6-201ENST00000390428 EIF4A2Q14240 407 aaKnown RBP10.6□□□□□ -0.71
TRAV6-201ENST00000390428 PLEKHG2Q9H7P9 1386 aa10.6□□□□□ -0.71
TRAV6-201ENST00000390428 KIF13BQ9NQT8 1826 aa10.6□□□□□ -0.71
TRAV6-201ENST00000390428 GOLGB1Q14789 3259 aaKnown RBP10.6□□□□□ -0.71
TRAV6-201ENST00000390428 CLSPNQ9HAW4 1339 aa10.59□□□□□ -0.71
TRAV6-201ENST00000390428 TNNT2P45379 298 aaPredicted RBP10.59□□□□□ -0.71
TRAV6-201ENST00000390428 PROX2Q3B8N5 592 aa10.59□□□□□ -0.71
TRAV6-201ENST00000390428 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
TRAV6-201ENST00000390428 ATG3Q9NT62 314 aa10.59□□□□□ -0.71
TRAV6-201ENST00000390428 ZNF831Q5JPB2 1677 aa10.59□□□□□ -0.71
TRAV6-201ENST00000390428 IGSF1Q8N6C5 1336 aa10.58□□□□□ -0.71
TRAV6-201ENST00000390428 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
TRAV6-201ENST00000390428 COL5A3P25940 1745 aaPredicted RBP10.58□□□□□ -0.72
TRAV6-201ENST00000390428 MYH14Q7Z406 1995 aaKnown RBP10.58□□□□□ -0.72
TRAV6-201ENST00000390428 GNPATO15228 680 aa10.58□□□□□ -0.72
TRAV6-201ENST00000390428 TSR1Q2NL82 804 aaKnown RBP10.58□□□□□ -0.72
TRAV6-201ENST00000390428 ADCY9O60503 1353 aa10.57□□□□□ -0.72
TRAV6-201ENST00000390428 KDRP35968 1356 aa10.57□□□□□ -0.72
TRAV6-201ENST00000390428 MAP3K7O43318 606 aa10.57□□□□□ -0.72
TRAV6-201ENST00000390428 OSBPP22059 807 aa10.57□□□□□ -0.72
TRAV6-201ENST00000390428 N4BP2Q86UW6 1770 aaPredicted RBP10.57□□□□□ -0.72
TRAV6-201ENST00000390428 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
TRAV6-201ENST00000390428 ERVV-2B6SEH9 535 aa10.56□□□□□ -0.72
TRAV6-201ENST00000390428 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
TRAV6-201ENST00000390428 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
TRAV6-201ENST00000390428 PCGF6Q9BYE7 350 aa10.56□□□□□ -0.72
TRAV6-201ENST00000390428 PANK3Q9H999 370 aa10.56□□□□□ -0.72
TRAV6-201ENST00000390428 WWC3Q9ULE0 1092 aa10.56□□□□□ -0.72
TRAV6-201ENST00000390428 MMP10P09238 476 aa10.55□□□□□ -0.72
TRAV6-201ENST00000390428 HSPA5P11021 654 aaKnown RBP10.55□□□□□ -0.72
TRAV6-201ENST00000390428 PLEKHO1Q53GL0 409 aaPredicted RBP10.55□□□□□ -0.72
TRAV6-201ENST00000390428 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
TRAV6-201ENST00000390428 DCAF5Q96JK2 942 aa10.55□□□□□ -0.72
TRAV6-201ENST00000390428 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
TRAV6-201ENST00000390428 GPBP1L1Q9HC44 474 aaPredicted RBP10.55□□□□□ -0.72
TRAV6-201ENST00000390428 RABGEF1Q9UJ41 708 aa10.55□□□□□ -0.72
TRAV6-201ENST00000390428 RTCBQ9Y3I0 505 aaKnown RBP10.55□□□□□ -0.72
TRAV6-201ENST00000390428 VIRMAQ69YN4 1812 aaKnown RBP10.55□□□□□ -0.72
TRAV6-201ENST00000390428 C4AP0C0L4 1744 aa10.55□□□□□ -0.72
TRAV6-201ENST00000390428 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
TRAV6-201ENST00000390428 KDM6AO15550 1401 aaPredicted RBP10.54□□□□□ -0.72
TRAV6-201ENST00000390428 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
TRAV6-201ENST00000390428 RC3H1Q5TC82 1133 aaKnown RBP10.54□□□□□ -0.72
TRAV6-201ENST00000390428 SCN11AQ9UI33 1791 aa10.54□□□□□ -0.72
TRAV6-201ENST00000390428 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
TRAV6-201ENST00000390428 CNTNAP4Q9C0A0 1308 aa10.54□□□□□ -0.72
TRAV6-201ENST00000390428 ZNF530Q6P9A1 599 aaPredicted RBP10.53□□□□□ -0.72
TRAV6-201ENST00000390428 NLGN1Q8N2Q7 840 aa10.53□□□□□ -0.72
TRAV6-201ENST00000390428 MRPL50Q8N5N7 158 aaKnown RBP10.53□□□□□ -0.72
TRAV6-201ENST00000390428 KCTD12Q96CX2 325 aaKnown RBP10.53□□□□□ -0.72
TRAV6-201ENST00000390428 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
TRAV6-201ENST00000390428 RPS6KA4O75676 772 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 MLLT3P42568 568 aaPredicted RBP10.52□□□□□ -0.73
TRAV6-201ENST00000390428 MTHFSP49914 203 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 CABP4P57796 275 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 TGFB2P61812 414 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 MORC1Q86VD1 984 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 AEBP1Q8IUX7 1158 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 ZNF526Q8TF50 670 aaPredicted RBP10.52□□□□□ -0.73
TRAV6-201ENST00000390428 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
TRAV6-201ENST00000390428 ARFGEF1Q9Y6D6 1849 aa10.51□□□□□ -0.73
TRAV6-201ENST00000390428 C10orf71Q711Q0 1435 aa10.51□□□□□ -0.73
TRAV6-201ENST00000390428 TJP1Q07157 1748 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms