RNA–Protein interactions for RNA: ENST00000390392.3

TRBV4-2-201, Transcript of T cell receptor beta variable 4-2, humanhuman

APPRIS P1 BASIC

Gene TRBV4-2, Length 455 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-2-201ENST00000390392 LMNB1P20700 586 aa17.88■□□□□ 0.45
TRBV4-2-201ENST00000390392 STYK1Q6J9G0 422 aa17.88■□□□□ 0.45
TRBV4-2-201ENST00000390392 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
TRBV4-2-201ENST00000390392 MASTLQ96GX5 879 aa17.88■□□□□ 0.45
TRBV4-2-201ENST00000390392 ERBB4Q15303 1308 aa17.88■□□□□ 0.45
TRBV4-2-201ENST00000390392 TMPOP42166 694 aaKnown RBP17.87■□□□□ 0.45
TRBV4-2-201ENST00000390392 SOGA3Q5TF21 947 aa17.87■□□□□ 0.45
TRBV4-2-201ENST00000390392 LAMB4A4D0S4 1761 aa17.86■□□□□ 0.45
TRBV4-2-201ENST00000390392 SRGNP10124 158 aa17.86■□□□□ 0.45
TRBV4-2-201ENST00000390392 HSPA6P17066 643 aa17.86■□□□□ 0.45
TRBV4-2-201ENST00000390392 PIP4K2AP48426 406 aaPredicted RBP17.86■□□□□ 0.45
TRBV4-2-201ENST00000390392 NIP7Q9Y221 180 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRBV4-2-201ENST00000390392 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
TRBV4-2-201ENST00000390392 WDR43Q15061 677 aaKnown RBP eCLIP17.85■□□□□ 0.45
TRBV4-2-201ENST00000390392 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
TRBV4-2-201ENST00000390392 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
TRBV4-2-201ENST00000390392 NYXQ9GZU5 481 aa17.85■□□□□ 0.45
TRBV4-2-201ENST00000390392 TSPYL4Q9UJ04 414 aa17.85■□□□□ 0.45
TRBV4-2-201ENST00000390392 KLRG2A4D1S0 409 aaPredicted RBP17.84■□□□□ 0.45
TRBV4-2-201ENST00000390392 KIF6Q6ZMV9 814 aa17.84■□□□□ 0.45
TRBV4-2-201ENST00000390392 GTF2E1P29083 439 aaPredicted RBP17.83■□□□□ 0.44
TRBV4-2-201ENST00000390392 ALDH1B1P30837 517 aa17.83■□□□□ 0.44
TRBV4-2-201ENST00000390392 DPY19L2Q6NUT2 758 aa17.83■□□□□ 0.44
TRBV4-2-201ENST00000390392 THUMPD2Q9BTF0 503 aaKnown RBP17.83■□□□□ 0.44
TRBV4-2-201ENST00000390392 RRP7AQ9Y3A4 280 aaKnown RBP17.83■□□□□ 0.44
TRBV4-2-201ENST00000390392 CCDC88AQ3V6T2 1871 aa17.83■□□□□ 0.44
TRBV4-2-201ENST00000390392 MAP3K15Q6ZN16 1313 aa17.82■□□□□ 0.44
TRBV4-2-201ENST00000390392 LTBP3Q9NS15 1303 aa17.82■□□□□ 0.44
TRBV4-2-201ENST00000390392 C21orf2O43822 256 aa17.82■□□□□ 0.44
TRBV4-2-201ENST00000390392 NPR1P16066 1061 aa17.82■□□□□ 0.44
TRBV4-2-201ENST00000390392 RBM46Q8TBY0 533 aaKnown RBP17.82■□□□□ 0.44
TRBV4-2-201ENST00000390392 GLTPD2A6NH11 291 aa17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 HLFQ16534 295 aa17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 CCDC24Q8N4L8 307 aa17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 PRKRIP1Q9H875 184 aaPredicted RBP17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 NMRK2Q9NPI5 230 aa17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 NUP98P52948 1817 aa17.81■□□□□ 0.44
TRBV4-2-201ENST00000390392 FSTL1Q12841 308 aa17.8■□□□□ 0.44
TRBV4-2-201ENST00000390392 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
TRBV4-2-201ENST00000390392 FER1L6Q2WGJ9 1857 aa17.8■□□□□ 0.44
TRBV4-2-201ENST00000390392 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 NFKBIEO00221 500 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 MYL6BP14649 208 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 APLP1P51693 650 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 RASSF7Q02833 373 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 PRPF40BQ6NWY9 871 aaKnown RBP17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 GIGYF2Q6Y7W6 1299 aaKnown RBP17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 RRAGCQ9HB90 399 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 ADAMTS8Q9UP79 889 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
TRBV4-2-201ENST00000390392 TNRC6CQ9HCJ0 1690 aaKnown RBP17.78■□□□□ 0.44
TRBV4-2-201ENST00000390392 CHL1O00533 1208 aa17.78■□□□□ 0.44
TRBV4-2-201ENST00000390392 VEGFAP15692 232 aaPredicted RBP17.78■□□□□ 0.44
TRBV4-2-201ENST00000390392 PPP1R42Q7Z4L9 355 aa17.78■□□□□ 0.44
TRBV4-2-201ENST00000390392 TAOK3Q9H2K8 898 aa17.78■□□□□ 0.44
TRBV4-2-201ENST00000390392 EIF2S2P20042 333 aaKnown RBP17.77■□□□□ 0.44
TRBV4-2-201ENST00000390392 NEUROD2Q15784 382 aa17.77■□□□□ 0.44
TRBV4-2-201ENST00000390392 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
TRBV4-2-201ENST00000390392 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
TRBV4-2-201ENST00000390392 PARP10Q53GL7 1025 aa17.77■□□□□ 0.44
TRBV4-2-201ENST00000390392 RTKN2Q8IZC4 609 aa17.77■□□□□ 0.44
TRBV4-2-201ENST00000390392 IBTKQ9P2D0 1353 aaPredicted RBP17.77■□□□□ 0.43
TRBV4-2-201ENST00000390392 SLX4Q8IY92 1834 aa17.77■□□□□ 0.43
TRBV4-2-201ENST00000390392 COL11A2P13942 1736 aaPredicted RBP17.76■□□□□ 0.43
TRBV4-2-201ENST00000390392 CCDC93Q567U6 631 aa17.76■□□□□ 0.43
TRBV4-2-201ENST00000390392 TTLL7Q6ZT98 887 aa17.76■□□□□ 0.43
TRBV4-2-201ENST00000390392 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
TRBV4-2-201ENST00000390392 ZNF34Q8IZ26 560 aa17.76■□□□□ 0.43
TRBV4-2-201ENST00000390392 C7orf43Q8WVR3 580 aa17.76■□□□□ 0.43
TRBV4-2-201ENST00000390392 FAM177BA6PVY3 158 aa17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 HOXB7P09629 217 aa17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 PRELPP51888 382 aa17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 HSP90AB3PQ58FF7 597 aa17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 CC2D2BQ6DHV5 1058 aa17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 ZNF219Q9P2Y4 722 aaPredicted RBP17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
TRBV4-2-201ENST00000390392 CACNA1SQ13698 1873 aa17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 PDIA6Q15084 440 aa17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 CRY2Q49AN0 593 aa17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 CHMP4AQ9BY43 222 aa17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 ZBTB3Q9H5J0 574 aa17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
TRBV4-2-201ENST00000390392 LRP10Q7Z4F1 713 aa17.73■□□□□ 0.43
TRBV4-2-201ENST00000390392 SMC1BQ8NDV3 1235 aa17.73■□□□□ 0.43
TRBV4-2-201ENST00000390392 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 RIC1Q4ADV7 1423 aa17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 FKBP4Q02790 459 aaKnown RBP eCLIP17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 SLC10A5Q5PT55 438 aa17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 SUSD4Q5VX71 490 aa17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 NLRP3Q96P20 1036 aa17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
TRBV4-2-201ENST00000390392 COPS6Q7L5N1 327 aa17.71■□□□□ 0.43
TRBV4-2-201ENST00000390392 RPGRQ92834 1020 aaKnown RBP17.71■□□□□ 0.43
TRBV4-2-201ENST00000390392 RBM17Q96I25 401 aaKnown RBP17.71■□□□□ 0.43
TRBV4-2-201ENST00000390392 CRAMP1Q96RY5 1269 aa17.71■□□□□ 0.43
TRBV4-2-201ENST00000390392 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms