RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 PPFIBP1Q86W92 1011 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 STK11IPQ8N1F8 1099 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 KDM5DQ9BY66 1539 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 TTLL5Q6EMB2 1281 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 GIMAP6Q6P9H5 292 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 STARD3NLO95772 234 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 GUCY1B3Q02153 619 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 UBE3BQ7Z3V4 1068 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 NECAB1Q8N987 351 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 MTMR7Q9Y216 660 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 SOS1Q07889 1333 aaPredicted RBP18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 KSR2Q6VAB6 950 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 ANKRD24Q8TF21 1146 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 UBAC1Q9BSL1 405 aa18.88■□□□□ 0.61
PTPRN2-201ENST00000389413 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
PTPRN2-201ENST00000389413 KIF2AO00139 706 aaPredicted RBP18.87■□□□□ 0.61
PTPRN2-201ENST00000389413 PTPN14Q15678 1187 aa18.87■□□□□ 0.61
PTPRN2-201ENST00000389413 TTC41PQ6P2S7 1318 aa18.87■□□□□ 0.61
PTPRN2-201ENST00000389413 MAP3K19Q56UN5 1328 aa18.87■□□□□ 0.61
PTPRN2-201ENST00000389413 SFPQP23246 707 aaKnown RBP eCLIP18.87■□□□□ 0.612e-6■■■■□ 20.2
PTPRN2-201ENST00000389413 MYO5CQ9NQX4 1742 aa18.87■□□□□ 0.61
PTPRN2-201ENST00000389413 ZNF165P49910 485 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 CCT2P78371 535 aaKnown RBP18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 HS1BP3Q53T59 392 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 G2E3Q7L622 706 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 IFNL2Q8IZJ0 200 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 GRM8O00222 908 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 CAVIN2O95810 425 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 F13A1P00488 732 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 AKAP4Q5JQC9 854 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 TRIM34Q9BYJ4 488 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 NOL7Q9UMY1 257 aaKnown RBP18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 GOLIM4O00461 696 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 ZKSCAN5Q9Y2L8 839 aa18.86■□□□□ 0.61
PTPRN2-201ENST00000389413 CFAP100Q494V2 611 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 ANKRD13DQ6ZTN6 518 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 PLA2R1Q13018 1463 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 MAGEC2Q9UBF1 373 aaPredicted RBP18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 MAP3K5Q99683 1374 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 NAP1L1P55209 391 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 FSIP1Q8NA03 581 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 CCDC66A2RUB6 948 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 ATP5J2-PTCD1G3V325 749 aa18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 IFIT5Q13325 482 aaKnown RBP18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 ERCC4Q92889 916 aaPredicted RBP18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 ZSCAN16Q9H4T2 348 aaPredicted RBP18.85■□□□□ 0.61
PTPRN2-201ENST00000389413 TRPM2O94759 1503 aa18.84■□□□□ 0.61
PTPRN2-201ENST00000389413 SNRPA1P09661 255 aaKnown RBP18.84■□□□□ 0.61
PTPRN2-201ENST00000389413 KRT28Q7Z3Y7 464 aa18.84■□□□□ 0.61
PTPRN2-201ENST00000389413 ZNF213O14771 459 aa18.84■□□□□ 0.61
PTPRN2-201ENST00000389413 FAM177A1Q8N128 213 aaPredicted RBP18.84■□□□□ 0.61
PTPRN2-201ENST00000389413 NEMFO60524 1076 aa18.84■□□□□ 0.61
PTPRN2-201ENST00000389413 AK2P54819 239 aa18.83■□□□□ 0.61
PTPRN2-201ENST00000389413 DYNC1I1O14576 645 aa18.83■□□□□ 0.61
PTPRN2-201ENST00000389413 LINS1Q8NG48 757 aa18.83■□□□□ 0.61
PTPRN2-201ENST00000389413 LRP2BPQ9P2M1 347 aa18.83■□□□□ 0.61
PTPRN2-201ENST00000389413 CAGE1Q8TC20 777 aa18.83■□□□□ 0.6
PTPRN2-201ENST00000389413 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.6
PTPRN2-201ENST00000389413 STX1AQ16623 288 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 KIF18AQ8NI77 898 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 TCEANC2Q96MN5 208 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 RUFY1Q96T51 708 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 TNNT1P13805 278 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 DNM1Q05193 864 aaKnown RBP18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 BRF1Q92994 677 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 PRIMPOLQ96LW4 560 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 AK7Q96M32 723 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 ABCC4O15439 1325 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 GOLGA8BA8MQT2 603 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 KIF24Q5T7B8 1368 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 PLEKHF1Q96S99 279 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 CWC25Q9NXE8 425 aaPredicted RBP18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 TMOD3Q9NYL9 352 aa18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 PA2G4Q9UQ80 394 aaKnown RBP18.82■□□□□ 0.6
PTPRN2-201ENST00000389413 CEP131Q9UPN4 1083 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 BCORL1Q5H9F3 1711 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 CCAR1Q8IX12 1150 aaKnown RBP18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 XAGE3Q8WTP9 111 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 ZBTB3Q9H5J0 574 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 MYOM2P54296 1465 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 C16orf45Q96MC5 204 aaPredicted RBP18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 PHAXQ9H814 394 aaKnown RBP18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 DDX46Q7L014 1031 aaKnown RBP18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 COPS6Q7L5N1 327 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 FAM200AQ8TCP9 573 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
PTPRN2-201ENST00000389413 JARID2Q92833 1246 aaPredicted RBP18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 NAPBQ9H115 298 aa18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 IGHMBP2P38935 993 aaKnown RBP18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 STIM1Q13586 685 aa18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 ZNHIT6Q9NWK9 470 aaKnown RBP18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 UBXN4Q92575 508 aa18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 RRAGDQ9NQL2 400 aaPredicted RBP18.8■□□□□ 0.6
PTPRN2-201ENST00000389413 PREX2Q70Z35 1606 aa18.79■□□□□ 0.6
PTPRN2-201ENST00000389413 NMIQ13287 307 aaPredicted RBP18.79■□□□□ 0.6
PTPRN2-201ENST00000389413 BABAM1Q9NWV8 329 aa18.79■□□□□ 0.6
PTPRN2-201ENST00000389413 HOXC9P31274 260 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms