RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 IL6STP40189 918 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3F-202ENST00000381565 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
APOBEC3F-202ENST00000381565 DDR1Q08345 913 aa15.17■□□□□ 0.02
APOBEC3F-202ENST00000381565 MRS2Q9HD23 443 aa15.17■□□□□ 0.02
APOBEC3F-202ENST00000381565 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
APOBEC3F-202ENST00000381565 CACNA1SQ13698 1873 aa15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 NBPF26B4DH59 902 aa15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 APAF1O14727 1248 aa15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 NBPF10Q6P3W6 841 aaKnown RBP15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 NBPF15Q8N660 670 aa15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 DNAJC5GQ8N7S2 189 aa15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 NMRK2Q9NPI5 230 aa15.16■□□□□ 0.02
APOBEC3F-202ENST00000381565 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
APOBEC3F-202ENST00000381565 POLRMTO00411 1230 aaKnown RBP15.14■□□□□ 0.01
APOBEC3F-202ENST00000381565 ZPR1O75312 459 aa15.14■□□□□ 0.01
APOBEC3F-202ENST00000381565 TOMM70O94826 608 aa15.14■□□□□ 0.01
APOBEC3F-202ENST00000381565 TM4SF1P30408 202 aa15.14■□□□□ 0.01
APOBEC3F-202ENST00000381565 APLP1P51693 650 aa15.14■□□□□ 0.01
APOBEC3F-202ENST00000381565 BABAM1Q9NWV8 329 aa15.14■□□□□ 0.01
APOBEC3F-202ENST00000381565 CHL1O00533 1208 aa15.13■□□□□ 0.01
APOBEC3F-202ENST00000381565 ARHGAP27Q6ZUM4 889 aa15.13■□□□□ 0.01
APOBEC3F-202ENST00000381565 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3F-202ENST00000381565 ARFGEF2Q9Y6D5 1785 aa15.13■□□□□ 0.01
APOBEC3F-202ENST00000381565 A0A087WZG4 1122 aa15.12■□□□□ 0.01
APOBEC3F-202ENST00000381565 CAMTA2O94983 1202 aa15.12■□□□□ 0.01
APOBEC3F-202ENST00000381565 NFIXQ14938 502 aa15.12■□□□□ 0.01
APOBEC3F-202ENST00000381565 TBC1D2BQ9UPU7 963 aa15.12■□□□□ 0.01
APOBEC3F-202ENST00000381565 WDR90Q96KV7 1748 aa15.12■□□□□ 0.01
APOBEC3F-202ENST00000381565 CARMIL3Q8ND23 1372 aa15.11■□□□□ 0.01
APOBEC3F-202ENST00000381565 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
APOBEC3F-202ENST00000381565 C9orf131Q5VYM1 1079 aa15.11■□□□□ 0.01
APOBEC3F-202ENST00000381565 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
APOBEC3F-202ENST00000381565 TNRC6CQ9HCJ0 1690 aaKnown RBP15.1■□□□□ 0.01
APOBEC3F-202ENST00000381565 ZNF853P0CG23 659 aa15.1■□□□□ 0.01
APOBEC3F-202ENST00000381565 TBC1D9BQ66K14 1250 aa15.1■□□□□ 0.01
APOBEC3F-202ENST00000381565 DZIP3Q86Y13 1208 aaKnown RBP15.1■□□□□ 0.01
APOBEC3F-202ENST00000381565 PCNTO95613 3336 aa15.1■□□□□ 0.01
APOBEC3F-202ENST00000381565 LRP10Q7Z4F1 713 aa15.09■□□□□ 0.01
APOBEC3F-202ENST00000381565 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
APOBEC3F-202ENST00000381565 MBIPQ9NS73 344 aa15.09■□□□□ 0.01
APOBEC3F-202ENST00000381565 HTRA3P83110 453 aa15.08■□□□□ 0
APOBEC3F-202ENST00000381565 PDIA6Q15084 440 aa15.08■□□□□ 0
APOBEC3F-202ENST00000381565 RBM46Q8TBY0 533 aaKnown RBP15.08■□□□□ 0
APOBEC3F-202ENST00000381565 LAS1LQ9Y4W2 734 aaKnown RBP15.08■□□□□ 0
APOBEC3F-202ENST00000381565 ERBB4Q15303 1308 aa15.08■□□□□ 0
APOBEC3F-202ENST00000381565 LAMB2P55268 1798 aa15.08■□□□□ 0
APOBEC3F-202ENST00000381565 SBF1O95248 1867 aa15.08■□□□□ 0
APOBEC3F-202ENST00000381565 CACNA1FO60840 1977 aa15.07■□□□□ 0
APOBEC3F-202ENST00000381565 CHRNA5P30532 468 aa15.07■□□□□ 0
APOBEC3F-202ENST00000381565 IFT57Q9NWB7 429 aa15.07■□□□□ 0
APOBEC3F-202ENST00000381565 PIM2Q9P1W9 311 aa15.07■□□□□ 0
APOBEC3F-202ENST00000381565 CCDC88AQ3V6T2 1871 aa15.06■□□□□ 0
APOBEC3F-202ENST00000381565 SERPINB2P05120 415 aa15.06■□□□□ 0
APOBEC3F-202ENST00000381565 MYL6BP14649 208 aa15.06■□□□□ 0
APOBEC3F-202ENST00000381565 CCDC27Q2M243 656 aa15.06■□□□□ 0
APOBEC3F-202ENST00000381565 PROSER3Q2NL68 480 aa15.06■□□□□ 0
APOBEC3F-202ENST00000381565 BICDL1Q6ZP65 573 aa15.06■□□□□ 0
APOBEC3F-202ENST00000381565 ANXA1P04083 346 aa15.05■□□□□ -0
APOBEC3F-202ENST00000381565 DALRD3Q5D0E6 543 aaKnown RBP15.05■□□□□ -0
APOBEC3F-202ENST00000381565 TTLL7Q6ZT98 887 aa15.05■□□□□ -0
APOBEC3F-202ENST00000381565 RGL2O15211 777 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 EIF2S2P20042 333 aaKnown RBP15.04■□□□□ -0
APOBEC3F-202ENST00000381565 PRELPP51888 382 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 GNAI1P63096 354 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 HLFQ16534 295 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 NPM2Q86SE8 214 aaKnown RBP15.04■□□□□ -0
APOBEC3F-202ENST00000381565 WWC1Q8IX03 1113 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 FAM9BQ8IZU0 186 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 RNF181Q9P0P0 153 aa15.04■□□□□ -0
APOBEC3F-202ENST00000381565 MAP3K15Q6ZN16 1313 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 HOXB7P09629 217 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 PRR5LQ6MZQ0 368 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 CLEC4GQ6UXB4 293 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 NGEFQ8N5V2 710 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 JMYQ8N9B5 988 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 NECTIN2Q92692 538 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 KLRG1Q96E93 195 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 FER1L6Q2WGJ9 1857 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 SLX4Q8IY92 1834 aa15.03■□□□□ -0
APOBEC3F-202ENST00000381565 DDX60Q8IY21 1712 aaKnown RBP15.03■□□□□ -0
APOBEC3F-202ENST00000381565 RASSF7Q02833 373 aa15.02■□□□□ -0
APOBEC3F-202ENST00000381565 CALD1Q05682 793 aaKnown RBP15.02■□□□□ -0
APOBEC3F-202ENST00000381565 FSTL1Q12841 308 aa15.02■□□□□ -0
APOBEC3F-202ENST00000381565 KDM2BQ8NHM5 1336 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 CCDC24Q8N4L8 307 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 TSR2Q969E8 191 aaKnown RBP15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 SETDB2Q96T68 719 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 ZBTB3Q9H5J0 574 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 RRAGCQ9HB90 399 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 CHPF2Q9P2E5 772 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 ZNF652Q9Y2D9 606 aa15.01□□□□□ -0.01
APOBEC3F-202ENST00000381565 UBN2Q6ZU65 1347 aa15□□□□□ -0.01
APOBEC3F-202ENST00000381565 ERVV-1B6SEH8 477 aa15□□□□□ -0.01
APOBEC3F-202ENST00000381565 COL13A1Q5TAT6 717 aaPredicted RBP15□□□□□ -0.01
APOBEC3F-202ENST00000381565 HDGFL1Q5TGJ6 251 aa15□□□□□ -0.01
APOBEC3F-202ENST00000381565 KIF6Q6ZMV9 814 aa15□□□□□ -0.01
APOBEC3F-202ENST00000381565 C8orf58Q8NAV2 365 aa15□□□□□ -0.01
APOBEC3F-202ENST00000381565 DDX21Q9NR30 783 aaKnown RBP eCLIP15□□□□□ -0.01
APOBEC3F-202ENST00000381565 NIP7Q9Y221 180 aaKnown RBP eCLIP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms