RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TMEM266Q2M3C6 531 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 GDPD2Q9HCC8 539 aa18.6■□□□□ 0.57
COL2A1-202ENST00000380518 CAVIN2O95810 425 aa18.59■□□□□ 0.57
COL2A1-202ENST00000380518 CATIPQ7Z7H3 387 aa18.59■□□□□ 0.57
COL2A1-202ENST00000380518 GOLIM4O00461 696 aa18.59■□□□□ 0.57
COL2A1-202ENST00000380518 MATR3P43243 847 aaKnown RBP eCLIP18.59■□□□□ 0.57
COL2A1-202ENST00000380518 TTF1Q15361 905 aaPredicted RBP18.59■□□□□ 0.57
COL2A1-202ENST00000380518 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
COL2A1-202ENST00000380518 PI4KAP2A4QPH2 592 aa18.59■□□□□ 0.57
COL2A1-202ENST00000380518 FBXO31Q5XUX0 539 aaPredicted RBP18.59■□□□□ 0.57
COL2A1-202ENST00000380518 PI4KAP1Q8N8J0 262 aa18.59■□□□□ 0.57
COL2A1-202ENST00000380518 CASQ1P31415 396 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 IARSP41252 1262 aaKnown RBP18.58■□□□□ 0.57
COL2A1-202ENST00000380518 KLHL40Q2TBA0 621 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 ANKIB1Q9P2G1 1089 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 DISP3Q9P2K9 1392 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 MCM5P33992 734 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 NLRP5P59047 1200 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 STX1AQ16623 288 aa18.58■□□□□ 0.57
COL2A1-202ENST00000380518 TNNT1P13805 278 aa18.58■□□□□ 0.56
COL2A1-202ENST00000380518 MCM3P25205 808 aa18.58■□□□□ 0.56
COL2A1-202ENST00000380518 LARP6Q9BRS8 491 aaKnown RBP18.58■□□□□ 0.56
COL2A1-202ENST00000380518 ZBTB3Q9H5J0 574 aa18.58■□□□□ 0.56
COL2A1-202ENST00000380518 SSR1P43307 286 aaKnown RBP18.58■□□□□ 0.56
COL2A1-202ENST00000380518 NEK1Q96PY6 1258 aa18.58■□□□□ 0.56
COL2A1-202ENST00000380518 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
COL2A1-202ENST00000380518 UBE2HP62256 183 aa18.57■□□□□ 0.56
COL2A1-202ENST00000380518 GBP2P32456 591 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-202ENST00000380518 LDHAL6AQ6ZMR3 332 aa18.57■□□□□ 0.56
COL2A1-202ENST00000380518 IFNL2Q8IZJ0 200 aa18.57■□□□□ 0.56
COL2A1-202ENST00000380518 USO1O60763 962 aaKnown RBP18.57■□□□□ 0.56
COL2A1-202ENST00000380518 YEATS4O95619 227 aa18.57■□□□□ 0.56
COL2A1-202ENST00000380518 ZNF165P49910 485 aa18.57■□□□□ 0.56
COL2A1-202ENST00000380518 ORC3Q9UBD5 711 aaPredicted RBP18.57■□□□□ 0.56
COL2A1-202ENST00000380518 TAF3Q5VWG9 929 aa18.56■□□□□ 0.56
COL2A1-202ENST00000380518 CWC25Q9NXE8 425 aaPredicted RBP18.56■□□□□ 0.56
COL2A1-202ENST00000380518 NUCB1Q02818 461 aa18.56■□□□□ 0.56
COL2A1-202ENST00000380518 UBE3BQ7Z3V4 1068 aa18.56■□□□□ 0.56
COL2A1-202ENST00000380518 SLF2Q8IX21 1173 aa18.56■□□□□ 0.56
COL2A1-202ENST00000380518 FAM83GA6ND36 823 aa18.56■□□□□ 0.56
COL2A1-202ENST00000380518 PAFAH1B1P43034 410 aa18.56■□□□□ 0.56
COL2A1-202ENST00000380518 NUP88Q99567 741 aaPredicted RBP18.56■□□□□ 0.56
COL2A1-202ENST00000380518 UVSSAQ2YD98 709 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 CCDC96Q2M329 555 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 TMEM67Q5HYA8 995 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 RHPN1Q8TCX5 695 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 CUL7Q14999 1698 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 ADCY5O95622 1261 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 PLCD4Q9BRC7 762 aa18.55■□□□□ 0.56
COL2A1-202ENST00000380518 GPTP24298 496 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 ERICH4A6NGS2 130 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 LUZP1Q86V48 1076 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 C16orf45Q96MC5 204 aaPredicted RBP18.54■□□□□ 0.56
COL2A1-202ENST00000380518 PYM1Q9BRP8 204 aaKnown RBP18.54■□□□□ 0.56
COL2A1-202ENST00000380518 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 KIF5BP33176 963 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 NCOA7Q8NI08 942 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 CCDC12Q8WUD4 166 aaPredicted RBP18.54■□□□□ 0.56
COL2A1-202ENST00000380518 ZSCAN16Q9H4T2 348 aaPredicted RBP18.54■□□□□ 0.56
COL2A1-202ENST00000380518 SNRKQ9NRH2 765 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 TRMT1Q9NXH9 659 aaKnown RBP18.54■□□□□ 0.56
COL2A1-202ENST00000380518 BIN1O00499 593 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 CPLX3Q8WVH0 158 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 RALGAPBQ86X10 1494 aa18.54■□□□□ 0.56
COL2A1-202ENST00000380518 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 CGNQ9P2M7 1197 aaKnown RBP18.53■□□□□ 0.56
COL2A1-202ENST00000380518 ATP5J2-PTCD1G3V325 749 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 TDRD12Q587J7 1177 aaKnown RBP18.53■□□□□ 0.56
COL2A1-202ENST00000380518 TSHZ3Q63HK5 1081 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 KANK3Q6NY19 840 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 CDC5LQ99459 802 aaKnown RBP18.53■□□□□ 0.56
COL2A1-202ENST00000380518 TMC6Q7Z403 805 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 CUL5Q93034 780 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 TMX3Q96JJ7 454 aa18.53■□□□□ 0.56
COL2A1-202ENST00000380518 GOLGA6L9A6NEM1 432 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 LDHCP07864 332 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 CCDC102BQ68D86 513 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 SHTN1A0MZ66 631 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 SNRPA1P09661 255 aaKnown RBP18.52■□□□□ 0.56
COL2A1-202ENST00000380518 SDSP20132 328 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 METAP2P50579 478 aaKnown RBP eCLIP18.52■□□□□ 0.56
COL2A1-202ENST00000380518 AMPD3Q01432 767 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 MICU3Q86XE3 530 aa18.52■□□□□ 0.56
COL2A1-202ENST00000380518 ACEP12821 1306 aa18.52■□□□□ 0.55
COL2A1-202ENST00000380518 MTIF2P46199 727 aaKnown RBP18.52■□□□□ 0.55
COL2A1-202ENST00000380518 EXOC5O00471 708 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 TRIM21P19474 475 aaKnown RBP18.51■□□□□ 0.55
COL2A1-202ENST00000380518 HAND2P61296 217 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 MFSD6Q6ZSS7 791 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 GRIN2AQ12879 1464 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 UBA7P41226 1012 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 KRT28Q7Z3Y7 464 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 CALML4Q96GE6 196 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 MEIS3Q99687 375 aa18.51■□□□□ 0.55
COL2A1-202ENST00000380518 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
COL2A1-202ENST00000380518 ANAPC15P60006 121 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
COL2A1-202ENST00000380518 PDE4BQ07343 736 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms