RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 ARFGEF2Q9Y6D5 1785 aa24.9■■□□□ 1.58
TMEM88B-201ENST00000378821 KLRG2A4D1S0 409 aaPredicted RBP24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 ERVV-1B6SEH8 477 aa24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 SRGNP10124 158 aa24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 PRELPP51888 382 aa24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 ST5P78524 1137 aa24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 STYK1Q6J9G0 422 aa24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 CCDC24Q8N4L8 307 aa24.89■■□□□ 1.58
TMEM88B-201ENST00000378821 FER1L6Q2WGJ9 1857 aa24.88■■□□□ 1.57
TMEM88B-201ENST00000378821 LMNB1P20700 586 aa24.88■■□□□ 1.57
TMEM88B-201ENST00000378821 ERBB4Q15303 1308 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 CCDC88AQ3V6T2 1871 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 NUP98P52948 1817 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 NFKBIEO00221 500 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 RASSF7Q02833 373 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 LMOD3Q0VAK6 560 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 HLFQ16534 295 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 NBPF5PQ86XG9 351 aaPredicted RBP24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 ZNF622Q969S3 477 aaKnown RBP eCLIP24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 NMRK2Q9NPI5 230 aa24.87■■□□□ 1.57
TMEM88B-201ENST00000378821 TOMM70O94826 608 aa24.86■■□□□ 1.57
TMEM88B-201ENST00000378821 TPTE2Q6XPS3 522 aa24.86■■□□□ 1.57
TMEM88B-201ENST00000378821 CNKSR1Q969H4 720 aa24.86■■□□□ 1.57
TMEM88B-201ENST00000378821 NIP7Q9Y221 180 aaKnown RBP eCLIP24.86■■□□□ 1.57
TMEM88B-201ENST00000378821 SLX4Q8IY92 1834 aa24.86■■□□□ 1.57
TMEM88B-201ENST00000378821 CEP350Q5VT06 3117 aa24.85■■□□□ 1.57
TMEM88B-201ENST00000378821 HSPA6P17066 643 aa24.85■■□□□ 1.57
TMEM88B-201ENST00000378821 MASTLQ96GX5 879 aa24.85■■□□□ 1.57
TMEM88B-201ENST00000378821 TSPYL4Q9UJ04 414 aa24.85■■□□□ 1.57
TMEM88B-201ENST00000378821 MAP3K15Q6ZN16 1313 aa24.85■■□□□ 1.57
TMEM88B-201ENST00000378821 KDM2BQ8NHM5 1336 aa24.85■■□□□ 1.57
TMEM88B-201ENST00000378821 RUNDC1Q96C34 613 aa24.84■■□□□ 1.57
TMEM88B-201ENST00000378821 TNRC6CQ9HCJ0 1690 aaKnown RBP24.84■■□□□ 1.57
TMEM88B-201ENST00000378821 LTBP3Q9NS15 1303 aa24.84■■□□□ 1.57
TMEM88B-201ENST00000378821 DICER1Q9UPY3 1922 aaKnown RBP24.83■■□□□ 1.57
TMEM88B-201ENST00000378821 LRP10Q7Z4F1 713 aa24.83■■□□□ 1.57
TMEM88B-201ENST00000378821 NPHP1O15259 732 aa24.82■■□□□ 1.56
TMEM88B-201ENST00000378821 C21orf2O43822 256 aa24.82■■□□□ 1.56
TMEM88B-201ENST00000378821 ADAMTS8Q9UP79 889 aa24.82■■□□□ 1.56
TMEM88B-201ENST00000378821 TRIM35Q9UPQ4 493 aa24.82■■□□□ 1.56
TMEM88B-201ENST00000378821 RRP7AQ9Y3A4 280 aaKnown RBP24.82■■□□□ 1.56
TMEM88B-201ENST00000378821 ANP32CO43423 234 aa24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 PDIA6Q15084 440 aa24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 PRPF40BQ6NWY9 871 aaKnown RBP24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 TTLL7Q6ZT98 887 aa24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 C7orf43Q8WVR3 580 aa24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 CACNA1SQ13698 1873 aa24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 TIAM2Q8IVF5 1701 aa24.81■■□□□ 1.56
TMEM88B-201ENST00000378821 CHL1O00533 1208 aa24.8■■□□□ 1.56
TMEM88B-201ENST00000378821 NPR1P16066 1061 aa24.8■■□□□ 1.56
TMEM88B-201ENST00000378821 CCDC146Q8IYE0 955 aa24.8■■□□□ 1.56
TMEM88B-201ENST00000378821 WDR43Q15061 677 aaKnown RBP eCLIP24.79■■□□□ 1.56
TMEM88B-201ENST00000378821 RBM46Q8TBY0 533 aaKnown RBP24.79■■□□□ 1.56
TMEM88B-201ENST00000378821 IBTKQ9P2D0 1353 aaPredicted RBP24.79■■□□□ 1.56
TMEM88B-201ENST00000378821 GLTPD2A6NH11 291 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 MYL6BP14649 208 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 CCDC184Q52MB2 194 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 SOGA3Q5TF21 947 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 KIF6Q6ZMV9 814 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 NGEFQ8N5V2 710 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 RIC1Q4ADV7 1423 aa24.78■■□□□ 1.56
TMEM88B-201ENST00000378821 ZNF34Q8IZ26 560 aa24.77■■□□□ 1.56
TMEM88B-201ENST00000378821 NYXQ9GZU5 481 aa24.77■■□□□ 1.56
TMEM88B-201ENST00000378821 CRY2Q49AN0 593 aa24.76■■□□□ 1.55
TMEM88B-201ENST00000378821 GIGYF2Q6Y7W6 1299 aaKnown RBP24.76■■□□□ 1.55
TMEM88B-201ENST00000378821 RRAGCQ9HB90 399 aa24.76■■□□□ 1.55
TMEM88B-201ENST00000378821 UBN2Q6ZU65 1347 aa24.75■■□□□ 1.55
TMEM88B-201ENST00000378821 NEUROD2Q15784 382 aa24.74■■□□□ 1.55
TMEM88B-201ENST00000378821 TAOK3Q9H2K8 898 aa24.74■■□□□ 1.55
TMEM88B-201ENST00000378821 ZBTB3Q9H5J0 574 aa24.74■■□□□ 1.55
TMEM88B-201ENST00000378821 ZNF219Q9P2Y4 722 aaPredicted RBP24.74■■□□□ 1.55
TMEM88B-201ENST00000378821 FSTL1Q12841 308 aa24.73■■□□□ 1.55
TMEM88B-201ENST00000378821 WDR90Q96KV7 1748 aa24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 ABCC12Q96J65 1359 aa24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 FAM177BA6PVY3 158 aa24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 EIF2S2P20042 333 aaKnown RBP24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 ALDH1B1P30837 517 aa24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 PROSER3Q2NL68 480 aa24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 SUSD4Q5VX71 490 aa24.72■■□□□ 1.55
TMEM88B-201ENST00000378821 GTF2E1P29083 439 aaPredicted RBP24.71■■□□□ 1.55
TMEM88B-201ENST00000378821 APLP1P51693 650 aa24.71■■□□□ 1.55
TMEM88B-201ENST00000378821 ERFEQ4G0M1 354 aa24.71■■□□□ 1.55
TMEM88B-201ENST00000378821 C16orf71Q8IYS4 520 aaPredicted RBP24.71■■□□□ 1.55
TMEM88B-201ENST00000378821 NTSR2O95665 410 aa24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 HOXB7P09629 217 aa24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 VEGFAP15692 232 aaPredicted RBP24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 HOXA10P31260 410 aaPredicted RBP24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 CCDC93Q567U6 631 aa24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 NUTM1Q86Y26 1132 aa24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 CFAP44Q96MT7 982 aa24.7■■□□□ 1.54
TMEM88B-201ENST00000378821 SNED1Q8TER0 1413 aa24.69■■□□□ 1.54
TMEM88B-201ENST00000378821 POTECB2RU33 542 aa24.69■■□□□ 1.54
TMEM88B-201ENST00000378821 GPTP24298 496 aa24.69■■□□□ 1.54
TMEM88B-201ENST00000378821 PARP10Q53GL7 1025 aa24.69■■□□□ 1.54
TMEM88B-201ENST00000378821 DDX21Q9NR30 783 aaKnown RBP eCLIP24.69■■□□□ 1.54
TMEM88B-201ENST00000378821 ANKRD36CQ5JPF3 1778 aa24.68■■□□□ 1.54
TMEM88B-201ENST00000378821 ZNF853P0CG23 659 aa24.68■■□□□ 1.54
TMEM88B-201ENST00000378821 KRT24Q2M2I5 525 aa24.68■■□□□ 1.54
TMEM88B-201ENST00000378821 DPY19L2Q6NUT2 758 aa24.68■■□□□ 1.54
TMEM88B-201ENST00000378821 ANXA1P04083 346 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms