RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 GDPD2Q9HCC8 539 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 RIMBP2O15034 1052 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 TMCO4Q5TGY1 634 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 TAF7Q15545 349 aaPredicted RBP18.85■□□□□ 0.61
RGP1-201ENST00000378078 LRSAM1Q6UWE0 723 aa18.85■□□□□ 0.61
RGP1-201ENST00000378078 PHACTR2O75167 634 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 CABP5Q9NP86 173 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 GCOM1H8Y6P7 765 aaPredicted RBP18.84■□□□□ 0.61
RGP1-201ENST00000378078 MYZAPP0CAP1 466 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 CALM1P0DP23 149 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 CALM2P0DP24 149 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 CALM3P0DP25 149 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 VPS36Q86VN1 386 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 FOXO3O43524 673 aa18.84■□□□□ 0.61
RGP1-201ENST00000378078 ST5P78524 1137 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 CHRNA2Q15822 529 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 PPM1EQ8WY54 764 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 TFIP11Q9UBB9 837 aaKnown RBP18.83■□□□□ 0.61
RGP1-201ENST00000378078 MRVI1Q9Y6F6 885 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 AQRO60306 1485 aaKnown RBP eCLIP18.83■□□□□ 0.616e-6■■■■□ 23.2
RGP1-201ENST00000378078 MVPQ14764 893 aaKnown RBP18.83■□□□□ 0.61
RGP1-201ENST00000378078 EP400NLQ6ZTU2 488 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 DDX46Q7L014 1031 aaKnown RBP18.83■□□□□ 0.61
RGP1-201ENST00000378078 CALML4Q96GE6 196 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 SLC26A6Q9BXS9 759 aa18.83■□□□□ 0.61
RGP1-201ENST00000378078 TMEM67Q5HYA8 995 aa18.83■□□□□ 0.6
RGP1-201ENST00000378078 SHTN1A0MZ66 631 aa18.83■□□□□ 0.6
RGP1-201ENST00000378078 PSMC4P43686 418 aa18.83■□□□□ 0.6
RGP1-201ENST00000378078 CIZ1Q9ULV3 898 aaPredicted RBP18.83■□□□□ 0.6
RGP1-201ENST00000378078 ARID5AQ03989 594 aa18.83■□□□□ 0.6
RGP1-201ENST00000378078 MICU3Q86XE3 530 aa18.83■□□□□ 0.6
RGP1-201ENST00000378078 TAF12Q16514 161 aa18.82■□□□□ 0.6
RGP1-201ENST00000378078 PKD2L1Q9P0L9 805 aa18.82■□□□□ 0.6
RGP1-201ENST00000378078 CCDC63Q8NA47 563 aa18.82■□□□□ 0.6
RGP1-201ENST00000378078 MAP3K2Q9Y2U5 619 aa18.82■□□□□ 0.6
RGP1-201ENST00000378078 UBXN4Q92575 508 aa18.82■□□□□ 0.6
RGP1-201ENST00000378078 C8orf37Q96NL8 207 aa18.82■□□□□ 0.6
RGP1-201ENST00000378078 ERBINQ96RT1 1412 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 NUDT16Q96DE0 195 aaKnown RBP18.81■□□□□ 0.6
RGP1-201ENST00000378078 PPP6R1Q9UPN7 881 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 A0A087WZG4 1122 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 A0A1W2PRG0 241 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 GIGYF2Q6Y7W6 1299 aaKnown RBP18.81■□□□□ 0.6
RGP1-201ENST00000378078 HEATR3Q7Z4Q2 680 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 AFMP43652 599 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 ZNF692Q9BU19 519 aaPredicted RBP18.81■□□□□ 0.6
RGP1-201ENST00000378078 MXRA7P84157 204 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 TMC6Q7Z403 805 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 UTP14AQ9BVJ6 771 aaKnown RBP18.81■□□□□ 0.6
RGP1-201ENST00000378078 CLIP2Q9UDT6 1046 aa18.81■□□□□ 0.6
RGP1-201ENST00000378078 EXOC5O00471 708 aa18.8■□□□□ 0.6
RGP1-201ENST00000378078 KRT32Q14532 448 aa18.8■□□□□ 0.6
RGP1-201ENST00000378078 GPATCH11Q8N954 259 aa18.8■□□□□ 0.6
RGP1-201ENST00000378078 JADE2Q9NQC1 790 aa18.8■□□□□ 0.6
RGP1-201ENST00000378078 GJA3Q9Y6H8 435 aa18.8■□□□□ 0.6
RGP1-201ENST00000378078 ZWINTO95229 277 aa18.8■□□□□ 0.6
RGP1-201ENST00000378078 STX8Q9UNK0 236 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 LRRC2Q9BYS8 371 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 CCDC174Q6PII3 467 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 TSPY3P0CV98 308 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 TSPY8P0CW00 308 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 ZSCAN31Q96LW9 406 aaPredicted RBP18.79■□□□□ 0.6
RGP1-201ENST00000378078 RAB34Q9BZG1 259 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 SMIM23A6NLE4 172 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 PTPN14Q15678 1187 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 RAB3IL1Q8TBN0 382 aa18.79■□□□□ 0.6
RGP1-201ENST00000378078 IPO4Q8TEX9 1081 aaKnown RBP18.79■□□□□ 0.6
RGP1-201ENST00000378078 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
RGP1-201ENST00000378078 SCAPERQ9BY12 1400 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 CSPG5O95196 566 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 HLA-DOAP06340 250 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 MX1P20591 662 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 FSIP1Q8NA03 581 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 IKBKGQ9Y6K9 419 aa18.78■□□□□ 0.6
RGP1-201ENST00000378078 MYOM3Q5VTT5 1437 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 EEF2P13639 858 aaKnown RBP18.77■□□□□ 0.6
RGP1-201ENST00000378078 NBPF6Q5VWK0 638 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 GSTA5Q7RTV2 222 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.6
RGP1-201ENST00000378078 NBPF4Q96M43 638 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 UIMC1Q96RL1 719 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 NAIPQ13075 1403 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 FSD2A1L4K1 749 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 ANXA1P04083 346 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 SLF2Q8IX21 1173 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 TIGD1Q96MW7 591 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 RFX1P22670 979 aa18.77■□□□□ 0.6
RGP1-201ENST00000378078 NDC80O14777 642 aa18.77■□□□□ 0.59
RGP1-201ENST00000378078 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.59
RGP1-201ENST00000378078 PPARDQ03181 441 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 ANKRD50Q9ULJ7 1429 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 USO1O60763 962 aaKnown RBP18.76■□□□□ 0.59
RGP1-201ENST00000378078 FGFR1OPO95684 399 aaKnown RBP18.76■□□□□ 0.59
RGP1-201ENST00000378078 PTGS1P23219 599 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 SBNO2Q9Y2G9 1366 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 SFPQP23246 707 aaKnown RBP eCLIP18.76■□□□□ 0.59
RGP1-201ENST00000378078 KIF1BPQ96EK5 621 aa18.76■□□□□ 0.59
RGP1-201ENST00000378078 C16orf45Q96MC5 204 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms