RNA–Protein interactions for RNA: ENST00000377135.8

IRF3-202, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,442 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-202ENST00000377135 C9orf131Q5VYM1 1079 aa23.37■■□□□ 1.33
IRF3-202ENST00000377135 TPTE2Q6XPS3 522 aa23.37■■□□□ 1.33
IRF3-202ENST00000377135 TRIM35Q9UPQ4 493 aa23.37■■□□□ 1.33
IRF3-202ENST00000377135 NRXN2Q9P2S2 1712 aa23.36■■□□□ 1.33
IRF3-202ENST00000377135 EIF2S2P20042 333 aaKnown RBP23.36■■□□□ 1.33
IRF3-202ENST00000377135 LAS1LQ9Y4W2 734 aaKnown RBP23.36■■□□□ 1.33
IRF3-202ENST00000377135 BRCA1P38398 1863 aaKnown RBP23.35■■□□□ 1.33
IRF3-202ENST00000377135 ERVV-1B6SEH8 477 aa23.34■■□□□ 1.33
IRF3-202ENST00000377135 ZNF316A6NFI3 1004 aaPredicted RBP23.33■■□□□ 1.33
IRF3-202ENST00000377135 FAM177BA6PVY3 158 aa23.33■■□□□ 1.33
IRF3-202ENST00000377135 CHL1O00533 1208 aa23.33■■□□□ 1.33
IRF3-202ENST00000377135 KIF6Q6ZMV9 814 aa23.33■■□□□ 1.33
IRF3-202ENST00000377135 TTLL7Q6ZT98 887 aa23.33■■□□□ 1.33
IRF3-202ENST00000377135 KDM3BQ7LBC6 1761 aa23.32■■□□□ 1.32
IRF3-202ENST00000377135 GTF2E1P29083 439 aaPredicted RBP23.32■■□□□ 1.32
IRF3-202ENST00000377135 RNF181Q9P0P0 153 aa23.32■■□□□ 1.32
IRF3-202ENST00000377135 MAP3K15Q6ZN16 1313 aa23.32■■□□□ 1.32
IRF3-202ENST00000377135 SCN7AQ01118 1682 aa23.31■■□□□ 1.32
IRF3-202ENST00000377135 ARFGEF1Q9Y6D6 1849 aa23.31■■□□□ 1.32
IRF3-202ENST00000377135 SRGNP10124 158 aa23.31■■□□□ 1.32
IRF3-202ENST00000377135 ZNF219Q9P2Y4 722 aaPredicted RBP23.31■■□□□ 1.32
IRF3-202ENST00000377135 ERBB4Q15303 1308 aa23.31■■□□□ 1.32
IRF3-202ENST00000377135 APAF1O14727 1248 aa23.3■■□□□ 1.32
IRF3-202ENST00000377135 STYK1Q6J9G0 422 aa23.3■■□□□ 1.32
IRF3-202ENST00000377135 CNKSR1Q969H4 720 aa23.3■■□□□ 1.32
IRF3-202ENST00000377135 ZBTB3Q9H5J0 574 aa23.3■■□□□ 1.32
IRF3-202ENST00000377135 C21orf2O43822 256 aa23.29■■□□□ 1.32
IRF3-202ENST00000377135 PDIA6Q15084 440 aa23.29■■□□□ 1.32
IRF3-202ENST00000377135 NECTIN2Q92692 538 aa23.29■■□□□ 1.32
IRF3-202ENST00000377135 MASTLQ96GX5 879 aa23.29■■□□□ 1.32
IRF3-202ENST00000377135 SENP3-EIF4A1A0A087X0R7 540 aa23.27■■□□□ 1.32
IRF3-202ENST00000377135 LMNB1P20700 586 aa23.27■■□□□ 1.32
IRF3-202ENST00000377135 RASSF7Q02833 373 aa23.27■■□□□ 1.32
IRF3-202ENST00000377135 GPTP24298 496 aa23.26■■□□□ 1.31
IRF3-202ENST00000377135 KRT24Q2M2I5 525 aa23.26■■□□□ 1.31
IRF3-202ENST00000377135 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
IRF3-202ENST00000377135 CFAP44Q96MT7 982 aa23.26■■□□□ 1.31
IRF3-202ENST00000377135 NYXQ9GZU5 481 aa23.26■■□□□ 1.31
IRF3-202ENST00000377135 KLRG2A4D1S0 409 aaPredicted RBP23.25■■□□□ 1.31
IRF3-202ENST00000377135 KIF3CO14782 793 aa23.25■■□□□ 1.31
IRF3-202ENST00000377135 ANXA1P04083 346 aa23.25■■□□□ 1.31
IRF3-202ENST00000377135 PROSER3Q2NL68 480 aa23.25■■□□□ 1.31
IRF3-202ENST00000377135 BCORQ6W2J9 1755 aa23.25■■□□□ 1.31
IRF3-202ENST00000377135 NPR1P16066 1061 aa23.25■■□□□ 1.31
IRF3-202ENST00000377135 GIGYF2Q6Y7W6 1299 aaKnown RBP23.25■■□□□ 1.31
IRF3-202ENST00000377135 LRP10Q7Z4F1 713 aa23.25■■□□□ 1.31
IRF3-202ENST00000377135 ANKRD31Q8N7Z5 1873 aa23.24■■□□□ 1.31
IRF3-202ENST00000377135 LAMB4A4D0S4 1761 aa23.24■■□□□ 1.31
IRF3-202ENST00000377135 NFKBIEO00221 500 aa23.24■■□□□ 1.31
IRF3-202ENST00000377135 PRPF40BQ6NWY9 871 aaKnown RBP23.24■■□□□ 1.31
IRF3-202ENST00000377135 COPS6Q7L5N1 327 aa23.24■■□□□ 1.31
IRF3-202ENST00000377135 ZNF34Q8IZ26 560 aa23.24■■□□□ 1.31
IRF3-202ENST00000377135 PRELPP51888 382 aa23.23■■□□□ 1.31
IRF3-202ENST00000377135 AIMP1Q12904 312 aaKnown RBP23.23■■□□□ 1.31
IRF3-202ENST00000377135 SUSD4Q5VX71 490 aa23.23■■□□□ 1.31
IRF3-202ENST00000377135 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
IRF3-202ENST00000377135 NMRK2Q9NPI5 230 aa23.23■■□□□ 1.31
IRF3-202ENST00000377135 KDM2BQ8NHM5 1336 aa23.22■■□□□ 1.31
IRF3-202ENST00000377135 ANP32CO43423 234 aa23.22■■□□□ 1.31
IRF3-202ENST00000377135 CALD1Q05682 793 aaKnown RBP23.22■■□□□ 1.31
IRF3-202ENST00000377135 ERFEQ4G0M1 354 aa23.22■■□□□ 1.31
IRF3-202ENST00000377135 DDX21Q9NR30 783 aaKnown RBP eCLIP23.22■■□□□ 1.31
IRF3-202ENST00000377135 XAGE3Q8WTP9 111 aa23.21■■□□□ 1.31
IRF3-202ENST00000377135 DLEC1Q9Y238 1755 aa23.21■■□□□ 1.31
IRF3-202ENST00000377135 ALDH1B1P30837 517 aa23.2■■□□□ 1.3
IRF3-202ENST00000377135 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
IRF3-202ENST00000377135 MBIPQ9NS73 344 aa23.2■■□□□ 1.3
IRF3-202ENST00000377135 ZNF853P0CG23 659 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 GNAI1P63096 354 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 PARP10Q53GL7 1025 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 HDGFL1Q5TGJ6 251 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 DUSP27Q5VZP5 1158 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 PPP1R42Q7Z4L9 355 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 C7orf43Q8WVR3 580 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 RRAGCQ9HB90 399 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 UBN2Q6ZU65 1347 aa23.19■■□□□ 1.3
IRF3-202ENST00000377135 TOMM70O94826 608 aa23.18■■□□□ 1.3
IRF3-202ENST00000377135 HOXB7P09629 217 aa23.18■■□□□ 1.3
IRF3-202ENST00000377135 IFT57Q9NWB7 429 aa23.18■■□□□ 1.3
IRF3-202ENST00000377135 CHPF2Q9P2E5 772 aa23.18■■□□□ 1.3
IRF3-202ENST00000377135 SBF1O95248 1867 aa23.18■■□□□ 1.3
IRF3-202ENST00000377135 TAOK3Q9H2K8 898 aa23.17■■□□□ 1.3
IRF3-202ENST00000377135 ZC3H4Q9UPT8 1303 aaKnown RBP23.17■■□□□ 1.3
IRF3-202ENST00000377135 NUP98P52948 1817 aa23.17■■□□□ 1.3
IRF3-202ENST00000377135 HSP90AB3PQ58FF7 597 aa23.16■■□□□ 1.3
IRF3-202ENST00000377135 UTP14AQ9BVJ6 771 aaKnown RBP23.16■■□□□ 1.3
IRF3-202ENST00000377135 MRS2Q9HD23 443 aa23.16■■□□□ 1.3
IRF3-202ENST00000377135 DBF4Q9UBU7 674 aaPredicted RBP23.16■■□□□ 1.3
IRF3-202ENST00000377135 ELL2O00472 640 aaPredicted RBP23.16■■□□□ 1.3
IRF3-202ENST00000377135 C16orf71Q8IYS4 520 aaPredicted RBP23.16■■□□□ 1.3
IRF3-202ENST00000377135 SLX4Q8IY92 1834 aa23.15■■□□□ 1.3
IRF3-202ENST00000377135 GLTPD2A6NH11 291 aa23.15■■□□□ 1.3
IRF3-202ENST00000377135 NTSR2O95665 410 aa23.15■■□□□ 1.3
IRF3-202ENST00000377135 TCIRG1Q13488 830 aa23.15■■□□□ 1.3
IRF3-202ENST00000377135 CRY2Q49AN0 593 aa23.15■■□□□ 1.3
IRF3-202ENST00000377135 DPY19L2Q6NUT2 758 aa23.15■■□□□ 1.3
IRF3-202ENST00000377135 LTBP3Q9NS15 1303 aa23.14■■□□□ 1.3
IRF3-202ENST00000377135 COL11A2P13942 1736 aaPredicted RBP23.14■■□□□ 1.29
IRF3-202ENST00000377135 CCDC93Q567U6 631 aa23.14■■□□□ 1.29
IRF3-202ENST00000377135 ANKRD13DQ6ZTN6 518 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms