RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 BLOC1S2Q6QNY1 142 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 KSR2Q6VAB6 950 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
DDR1-227ENST00000376570 TTLL7Q6ZT98 887 aa13.96□□□□□ -0.17
DDR1-227ENST00000376570 IL25Q9H293 177 aa13.96□□□□□ -0.17
DDR1-227ENST00000376570 IQGAP1P46940 1657 aa13.96□□□□□ -0.17
DDR1-227ENST00000376570 AK2P54819 239 aa13.96□□□□□ -0.17
DDR1-227ENST00000376570 SKOR2Q2VWA4 1001 aaPredicted RBP13.96□□□□□ -0.17
DDR1-227ENST00000376570 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.18
DDR1-227ENST00000376570 PTH1RQ03431 593 aa13.96□□□□□ -0.18
DDR1-227ENST00000376570 CCDC57Q2TAC2 916 aa13.96□□□□□ -0.18
DDR1-227ENST00000376570 FAM182BQ5T319 152 aa13.96□□□□□ -0.18
DDR1-227ENST00000376570 RASEFQ8IZ41 740 aa13.96□□□□□ -0.18
DDR1-227ENST00000376570 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.18
DDR1-227ENST00000376570 PIK3C2BO00750 1634 aa13.96□□□□□ -0.18
DDR1-227ENST00000376570 ARHGEF40Q8TER5 1519 aa13.95□□□□□ -0.18
DDR1-227ENST00000376570 RBM25P49756 843 aaKnown RBP13.95□□□□□ -0.18
DDR1-227ENST00000376570 SMIM5Q71RC9 77 aa13.95□□□□□ -0.18
DDR1-227ENST00000376570 C19orf44Q9H6X5 657 aa13.95□□□□□ -0.18
DDR1-227ENST00000376570 MROH1Q8NDA8 1641 aa13.95□□□□□ -0.18
DDR1-227ENST00000376570 GADD45BO75293 160 aaPredicted RBP13.95□□□□□ -0.18
DDR1-227ENST00000376570 ZMYND15Q9H091 742 aa13.95□□□□□ -0.18
DDR1-227ENST00000376570 RBM8AQ9Y5S9 174 aaKnown RBP13.95□□□□□ -0.18
DDR1-227ENST00000376570 GIGYF1O75420 1035 aaPredicted RBP13.94□□□□□ -0.18
DDR1-227ENST00000376570 RXRAP19793 462 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 GJB2P29033 226 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 GIMAP6Q6P9H5 292 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 CPLX1O14810 134 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 EAF2Q96CJ1 260 aaPredicted RBP13.94□□□□□ -0.18
DDR1-227ENST00000376570 TMOD3Q9NYL9 352 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 IGSF1Q8N6C5 1336 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 TTC39AQ5SRH9 613 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 NFXL1Q6ZNB6 911 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 HDAC5Q9UQL6 1122 aa13.94□□□□□ -0.18
DDR1-227ENST00000376570 ISM2Q6H9L7 571 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 SYNE4Q8N205 404 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 HYPKQ9NX55 129 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 NSFL1CQ9UNZ2 370 aaKnown RBP13.93□□□□□ -0.18
DDR1-227ENST00000376570 RAD21O60216 631 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 RAB3GAP1Q15042 981 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 RNF20Q5VTR2 975 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 ABCF2Q9UG63 623 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 SNAP23O00161 211 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 DNM1Q05193 864 aaKnown RBP13.93□□□□□ -0.18
DDR1-227ENST00000376570 ZNF592Q92610 1267 aa13.93□□□□□ -0.18
DDR1-227ENST00000376570 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
DDR1-227ENST00000376570 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 USP25Q9UHP3 1055 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 CD163L1Q9NR16 1453 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 SNRPA1P09661 255 aaKnown RBP13.92□□□□□ -0.18
DDR1-227ENST00000376570 IFIT1P09914 478 aaKnown RBP13.92□□□□□ -0.18
DDR1-227ENST00000376570 ZSCAN23Q3MJ62 389 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 EPHA10Q5JZY3 1008 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 ZCRB1Q8TBF4 217 aaKnown RBP13.92□□□□□ -0.18
DDR1-227ENST00000376570 ERCC4Q92889 916 aaPredicted RBP13.92□□□□□ -0.18
DDR1-227ENST00000376570 BRF1Q92994 677 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
DDR1-227ENST00000376570 BEND3Q5T5X7 828 aa13.91□□□□□ -0.18
DDR1-227ENST00000376570 KIF2CQ99661 725 aa13.91□□□□□ -0.18
DDR1-227ENST00000376570 MYO3AQ8NEV4 1616 aa13.91□□□□□ -0.18
DDR1-227ENST00000376570 HCLS1P14317 486 aaPredicted RBP13.91□□□□□ -0.18
DDR1-227ENST00000376570 WWC3Q9ULE0 1092 aa13.91□□□□□ -0.18
DDR1-227ENST00000376570 CLTCQ00610 1675 aaKnown RBP13.91□□□□□ -0.18
DDR1-227ENST00000376570 USP48Q86UV5 1035 aa13.91□□□□□ -0.18
DDR1-227ENST00000376570 VPS37DQ86XT2 251 aa13.91□□□□□ -0.18
DDR1-227ENST00000376570 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
DDR1-227ENST00000376570 PTPRUQ92729 1446 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 OTUD7BQ6GQQ9 843 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 KIF6Q6ZMV9 814 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 LINS1Q8NG48 757 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 BTG4Q9NY30 223 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 ARHGAP31Q2M1Z3 1444 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 ARAP3Q8WWN8 1544 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 ZBTB9Q96C00 473 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 NCOA5Q9HCD5 579 aaKnown RBP13.9□□□□□ -0.18
DDR1-227ENST00000376570 PRDM10Q9NQV6 1147 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 LAMC1P11047 1609 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 A0A087WWV3 80 aa13.9□□□□□ -0.18
DDR1-227ENST00000376570 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.9□□□□□ -0.18
DDR1-227ENST00000376570 PI16Q6UXB8 463 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 RALYLQ86SE5 291 aaKnown RBP13.89□□□□□ -0.19
DDR1-227ENST00000376570 ARHGEF25Q86VW2 580 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 A0A0D9SFI3 127 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 ERC1Q8IUD2 1116 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 DNAJC10Q8IXB1 793 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 C17orf53Q8N3J3 647 aaPredicted RBP13.89□□□□□ -0.19
DDR1-227ENST00000376570 PUS3Q9BZE2 481 aaKnown RBP13.89□□□□□ -0.19
DDR1-227ENST00000376570 LIMCH1Q9UPQ0 1083 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 SAMD1Q6SPF0 538 aaPredicted RBP13.89□□□□□ -0.19
DDR1-227ENST00000376570 SNX14Q9Y5W7 946 aa13.89□□□□□ -0.19
DDR1-227ENST00000376570 LARGE1O95461 756 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 POLR3DP05423 398 aaPredicted RBP13.88□□□□□ -0.19
DDR1-227ENST00000376570 LDHAL6AQ6ZMR3 332 aa13.88□□□□□ -0.19
DDR1-227ENST00000376570 SNX21Q969T3 373 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms