RNA–Protein interactions for RNA: ENST00000376400.3

CFTRP3-201, Transcript of cystic fibrosis transmembrane conductance regulator pseudogene 3, humanhuman

BASIC

Gene CFTRP3, Length 212 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP3-201ENST00000376400 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
CFTRP3-201ENST00000376400 AMPHP49418 695 aa13.58□□□□□ -0.24
CFTRP3-201ENST00000376400 RRS1Q15050 365 aaKnown RBP13.58□□□□□ -0.24
CFTRP3-201ENST00000376400 THSD4Q6ZMP0 1018 aa13.58□□□□□ -0.24
CFTRP3-201ENST00000376400 SYT17Q9BSW7 474 aa13.58□□□□□ -0.24
CFTRP3-201ENST00000376400 FHDC1Q9C0D6 1143 aaPredicted RBP13.58□□□□□ -0.24
CFTRP3-201ENST00000376400 TMF1P82094 1093 aa13.57□□□□□ -0.24
CFTRP3-201ENST00000376400 NBPF6Q5VWK0 638 aa13.57□□□□□ -0.24
CFTRP3-201ENST00000376400 NBPF4Q96M43 638 aa13.57□□□□□ -0.24
CFTRP3-201ENST00000376400 GGNBP2Q9H3C7 697 aa13.57□□□□□ -0.24
CFTRP3-201ENST00000376400 MAP3K5Q99683 1374 aa13.57□□□□□ -0.24
CFTRP3-201ENST00000376400 TAF1LQ8IZX4 1826 aa13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 PTPN5P54829 565 aa13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 TRIM26Q12899 539 aaPredicted RBP13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 SLC27A3Q5K4L6 730 aa13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 RBM46Q8TBY0 533 aaKnown RBP13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 PKD1L3Q7Z443 1732 aa13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 TOGARAM1Q9Y4F4 1720 aa13.56□□□□□ -0.24
CFTRP3-201ENST00000376400 ITGB4P16144 1822 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 SOWAHBA6NEL2 793 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 FECHP22830 423 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 KCNQ4P56696 695 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 LRCH3Q96II8 777 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 EYA1Q99502 592 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 ADGRG1Q9Y653 693 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 C5P01031 1676 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 PNPLA7Q6ZV29 1317 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 INSRP06213 1382 aa13.55□□□□□ -0.24
CFTRP3-201ENST00000376400 FAM161AQ3B820 660 aa13.54□□□□□ -0.24
CFTRP3-201ENST00000376400 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
CFTRP3-201ENST00000376400 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
CFTRP3-201ENST00000376400 ARXQ96QS3 562 aa13.54□□□□□ -0.24
CFTRP3-201ENST00000376400 MAP2P11137 1827 aaKnown RBP13.54□□□□□ -0.24
CFTRP3-201ENST00000376400 KIF24Q5T7B8 1368 aa13.54□□□□□ -0.24
CFTRP3-201ENST00000376400 BCAMP50895 628 aa13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 HSP90AB2PQ58FF8 381 aa13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 CARD14Q9BXL6 1004 aa13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 CGNL1Q0VF96 1302 aa13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 FLT4P35916 1363 aa13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 SMG6Q86US8 1419 aaKnown RBP13.53□□□□□ -0.24
CFTRP3-201ENST00000376400 OATP04181 439 aa13.52□□□□□ -0.25
CFTRP3-201ENST00000376400 SAMD7Q7Z3H4 446 aa13.52□□□□□ -0.25
CFTRP3-201ENST00000376400 SLC16A10Q8TF71 515 aa13.52□□□□□ -0.25
CFTRP3-201ENST00000376400 NCAPD2Q15021 1401 aa13.52□□□□□ -0.25
CFTRP3-201ENST00000376400 NSD3Q9BZ95 1437 aa13.51□□□□□ -0.25
CFTRP3-201ENST00000376400 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
CFTRP3-201ENST00000376400 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
CFTRP3-201ENST00000376400 UTRNP46939 3433 aa13.49□□□□□ -0.25
CFTRP3-201ENST00000376400 TFCP2L1Q9NZI6 479 aa13.49□□□□□ -0.25
CFTRP3-201ENST00000376400 CCNL1Q9UK58 526 aaPredicted RBP13.49□□□□□ -0.25
CFTRP3-201ENST00000376400 EMILIN1Q9Y6C2 1016 aa13.49□□□□□ -0.25
CFTRP3-201ENST00000376400 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 CYP27B1O15528 508 aa13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 TATP17735 454 aaPredicted RBP13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 DNAJB2P25686 324 aa13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 ZNF784Q8NCA9 323 aaPredicted RBP13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 UBR3Q6ZT12 1888 aa13.48□□□□□ -0.25
CFTRP3-201ENST00000376400 C4BP0C0L5 1744 aa13.47□□□□□ -0.25
CFTRP3-201ENST00000376400 PXYLP1Q8TE99 480 aa13.47□□□□□ -0.25
CFTRP3-201ENST00000376400 POLD1P28340 1107 aa13.46□□□□□ -0.25
CFTRP3-201ENST00000376400 COL23A1Q86Y22 540 aaPredicted RBP13.46□□□□□ -0.25
CFTRP3-201ENST00000376400 TSR3Q9UJK0 312 aaKnown RBP13.46□□□□□ -0.25
CFTRP3-201ENST00000376400 TIMELESSQ9UNS1 1208 aa13.46□□□□□ -0.25
CFTRP3-201ENST00000376400 HPS5Q9UPZ3 1129 aa13.46□□□□□ -0.25
CFTRP3-201ENST00000376400 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
CFTRP3-201ENST00000376400 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
CFTRP3-201ENST00000376400 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
CFTRP3-201ENST00000376400 SWT1Q5T5J6 900 aaKnown RBP13.45□□□□□ -0.26
CFTRP3-201ENST00000376400 METTL3Q86U44 580 aaKnown RBP13.45□□□□□ -0.26
CFTRP3-201ENST00000376400 WASHC2AQ641Q2 1341 aa13.44□□□□□ -0.26
CFTRP3-201ENST00000376400 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
CFTRP3-201ENST00000376400 RNF40O75150 1001 aa13.44□□□□□ -0.26
CFTRP3-201ENST00000376400 PPP4CP60510 307 aa13.44□□□□□ -0.26
CFTRP3-201ENST00000376400 MAP2K5Q13163 448 aa13.44□□□□□ -0.26
CFTRP3-201ENST00000376400 NLGN2Q8NFZ4 835 aa13.44□□□□□ -0.26
CFTRP3-201ENST00000376400 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
CFTRP3-201ENST00000376400 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
CFTRP3-201ENST00000376400 ZC3H15Q8WU90 426 aaKnown RBP13.43□□□□□ -0.26
CFTRP3-201ENST00000376400 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
CFTRP3-201ENST00000376400 SLF2Q8IX21 1173 aa13.42□□□□□ -0.26
CFTRP3-201ENST00000376400 TMEM134Q9H6X4 195 aa13.42□□□□□ -0.26
CFTRP3-201ENST00000376400 POLKQ9UBT6 870 aa13.42□□□□□ -0.26
CFTRP3-201ENST00000376400 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
CFTRP3-201ENST00000376400 GPR162Q16538 588 aa13.41□□□□□ -0.26
CFTRP3-201ENST00000376400 NYAP1Q6ZVC0 841 aa13.41□□□□□ -0.26
CFTRP3-201ENST00000376400 AMIGO3Q86WK7 504 aa13.41□□□□□ -0.26
CFTRP3-201ENST00000376400 PIGBQ92521 554 aa13.41□□□□□ -0.26
CFTRP3-201ENST00000376400 IRF6O14896 467 aa13.4□□□□□ -0.26
CFTRP3-201ENST00000376400 MSL1Q68DK7 614 aa13.4□□□□□ -0.26
CFTRP3-201ENST00000376400 ZMYND10O75800 440 aa13.39□□□□□ -0.27
CFTRP3-201ENST00000376400 YBX3P16989 372 aaKnown RBP eCLIP13.39□□□□□ -0.27
CFTRP3-201ENST00000376400 KRI1Q8N9T8 703 aaKnown RBP13.39□□□□□ -0.27
CFTRP3-201ENST00000376400 NECTIN2Q92692 538 aa13.39□□□□□ -0.27
CFTRP3-201ENST00000376400 SMARCC1Q92922 1105 aaPredicted RBP13.39□□□□□ -0.27
CFTRP3-201ENST00000376400 SPG7Q9UQ90 795 aa13.39□□□□□ -0.27
CFTRP3-201ENST00000376400 ZNF831Q5JPB2 1677 aa13.38□□□□□ -0.27
CFTRP3-201ENST00000376400 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms