RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 INTS5Q6P9B9 1019 aaKnown RBP26.82■■□□□ 1.88
HLA-C-201ENST00000376228 CYP19A1P11511 503 aaPredicted RBP26.81■■□□□ 1.88
HLA-C-201ENST00000376228 EIF4A1P60842 406 aaKnown RBP26.81■■□□□ 1.88
HLA-C-201ENST00000376228 TMEM57Q8N5G2 664 aa26.81■■□□□ 1.88
HLA-C-201ENST00000376228 ARHGEF1Q92888 912 aaKnown RBP26.81■■□□□ 1.88
HLA-C-201ENST00000376228 CHMP4BQ9H444 224 aaKnown RBP26.81■■□□□ 1.88
HLA-C-201ENST00000376228 HEG1Q9ULI3 1381 aa26.81■■□□□ 1.88
HLA-C-201ENST00000376228 CCDC30Q5VVM6 783 aa26.8■■□□□ 1.88
HLA-C-201ENST00000376228 VSIG10Q8N0Z9 540 aa26.8■■□□□ 1.88
HLA-C-201ENST00000376228 SYT17Q9BSW7 474 aa26.8■■□□□ 1.88
HLA-C-201ENST00000376228 CCDC87Q9NVE4 849 aa26.8■■□□□ 1.88
HLA-C-201ENST00000376228 FMNL2Q96PY5 1086 aa26.78■■□□□ 1.88
HLA-C-201ENST00000376228 TCERG1O14776 1098 aaKnown RBP26.77■■□□□ 1.88
HLA-C-201ENST00000376228 ADRA2BP18089 450 aa26.77■■□□□ 1.88
HLA-C-201ENST00000376228 RFC4P35249 363 aa26.77■■□□□ 1.88
HLA-C-201ENST00000376228 ITPRIPQ8IWB1 547 aa26.77■■□□□ 1.88
HLA-C-201ENST00000376228 ZBTB1Q9Y2K1 713 aa26.77■■□□□ 1.88
HLA-C-201ENST00000376228 STK31Q9BXU1 1019 aa26.76■■□□□ 1.87
HLA-C-201ENST00000376228 SLC4A2P04920 1241 aa26.75■■□□□ 1.87
HLA-C-201ENST00000376228 ZBTB40Q9NUA8 1239 aa26.75■■□□□ 1.87
HLA-C-201ENST00000376228 SRP68Q9UHB9 627 aaKnown RBP26.75■■□□□ 1.87
HLA-C-201ENST00000376228 GOLGB1Q14789 3259 aaKnown RBP26.75■■□□□ 1.87
HLA-C-201ENST00000376228 UTRNP46939 3433 aa26.74■■□□□ 1.87
HLA-C-201ENST00000376228 PRAMEF22A3QJZ6 481 aa26.74■■□□□ 1.87
HLA-C-201ENST00000376228 INTS3Q68E01 1043 aaKnown RBP26.74■■□□□ 1.87
HLA-C-201ENST00000376228 PCDHB15Q9Y5E8 787 aa26.73■■□□□ 1.87
HLA-C-201ENST00000376228 STARD3NLO95772 234 aa26.72■■□□□ 1.87
HLA-C-201ENST00000376228 GYS1P13807 737 aa26.72■■□□□ 1.87
HLA-C-201ENST00000376228 COL15A1P39059 1388 aa26.72■■□□□ 1.87
HLA-C-201ENST00000376228 ZBTB7BO15156 539 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-201ENST00000376228 N4BP2Q86UW6 1770 aaPredicted RBP26.71■■□□□ 1.87
HLA-C-201ENST00000376228 NLGN2Q8NFZ4 835 aa26.7■■□□□ 1.87
HLA-C-201ENST00000376228 LAMB4A4D0S4 1761 aa26.7■■□□□ 1.86
HLA-C-201ENST00000376228 MMP10P09238 476 aa26.7■■□□□ 1.86
HLA-C-201ENST00000376228 HDGFL1Q5TGJ6 251 aa26.7■■□□□ 1.86
HLA-C-201ENST00000376228 USP42Q9H9J4 1324 aaKnown RBP26.69■■□□□ 1.86
HLA-C-201ENST00000376228 IGHDP01880 384 aa26.69■■□□□ 1.86
HLA-C-201ENST00000376228 TEX13AQ9BXU3 409 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-201ENST00000376228 RWDD1Q9H446 243 aaPredicted RBP26.69■■□□□ 1.86
HLA-C-201ENST00000376228 TSHZ2Q9NRE2 1034 aa26.69■■□□□ 1.86
HLA-C-201ENST00000376228 USP16Q9Y5T5 823 aa26.69■■□□□ 1.86
HLA-C-201ENST00000376228 GIGYF1O75420 1035 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-201ENST00000376228 A1BGP04217 495 aa26.68■■□□□ 1.86
HLA-C-201ENST00000376228 ZNF330Q9Y3S2 320 aaPredicted RBP26.68■■□□□ 1.86
HLA-C-201ENST00000376228 PIP4K2AP48426 406 aaPredicted RBP26.67■■□□□ 1.86
HLA-C-201ENST00000376228 NLGN1Q8N2Q7 840 aa26.67■■□□□ 1.86
HLA-C-201ENST00000376228 SNRPA1P09661 255 aaKnown RBP26.66■■□□□ 1.86
HLA-C-201ENST00000376228 HDAC1Q13547 482 aaPredicted RBP26.66■■□□□ 1.86
HLA-C-201ENST00000376228 USPL1Q5W0Q7 1092 aa26.66■■□□□ 1.86
HLA-C-201ENST00000376228 G2E3Q7L622 706 aa26.66■■□□□ 1.86
HLA-C-201ENST00000376228 ZPR1O75312 459 aa26.65■■□□□ 1.86
HLA-C-201ENST00000376228 FLIIQ13045 1269 aa26.65■■□□□ 1.86
HLA-C-201ENST00000376228 PXDNLA1KZ92 1463 aa26.64■■□□□ 1.85
HLA-C-201ENST00000376228 EIF5P55010 431 aaKnown RBP26.64■■□□□ 1.85
HLA-C-201ENST00000376228 SCN7AQ01118 1682 aa26.63■■□□□ 1.85
HLA-C-201ENST00000376228 CCT4P50991 539 aaKnown RBP26.62■■□□□ 1.85
HLA-C-201ENST00000376228 NARFQ9UHQ1 456 aa26.62■■□□□ 1.85
HLA-C-201ENST00000376228 KIF13BQ9NQT8 1826 aa26.62■■□□□ 1.85
HLA-C-201ENST00000376228 DCAF8L1A6NGE4 600 aa26.61■■□□□ 1.85
HLA-C-201ENST00000376228 DBF4Q9UBU7 674 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-201ENST00000376228 CD2APQ9Y5K6 639 aa26.6■■□□□ 1.85
HLA-C-201ENST00000376228 IL6STP40189 918 aaPredicted RBP26.6■■□□□ 1.85
HLA-C-201ENST00000376228 TBC1D2BQ9UPU7 963 aa26.6■■□□□ 1.85
HLA-C-201ENST00000376228 PARP3Q9Y6F1 533 aa26.6■■□□□ 1.85
HLA-C-201ENST00000376228 BCORQ6W2J9 1755 aa26.59■■□□□ 1.85
HLA-C-201ENST00000376228 AFDNP55196 1824 aaKnown RBP26.59■■□□□ 1.85
HLA-C-201ENST00000376228 BCL2L12Q9HB09 334 aa26.59■■□□□ 1.85
HLA-C-201ENST00000376228 EIF2S2P20042 333 aaKnown RBP26.58■■□□□ 1.85
HLA-C-201ENST00000376228 DDR1Q08345 913 aa26.58■■□□□ 1.85
HLA-C-201ENST00000376228 NECTIN2Q92692 538 aa26.58■■□□□ 1.85
HLA-C-201ENST00000376228 KIAA1551Q9HCM1 1747 aa26.57■■□□□ 1.84
HLA-C-201ENST00000376228 A0A087WZG4 1122 aa26.57■■□□□ 1.84
HLA-C-201ENST00000376228 FKBP5Q13451 457 aaPredicted RBP26.57■■□□□ 1.84
HLA-C-201ENST00000376228 CHPF2Q9P2E5 772 aa26.56■■□□□ 1.84
HLA-C-201ENST00000376228 NBPF26B4DH59 902 aa26.55■■□□□ 1.84
HLA-C-201ENST00000376228 GPR162Q16538 588 aa26.55■■□□□ 1.84
HLA-C-201ENST00000376228 NBPF10Q6P3W6 841 aaKnown RBP26.55■■□□□ 1.84
HLA-C-201ENST00000376228 NPM2Q86SE8 214 aaKnown RBP26.55■■□□□ 1.84
HLA-C-201ENST00000376228 NBPF15Q8N660 670 aa26.55■■□□□ 1.84
HLA-C-201ENST00000376228 WWC3Q9ULE0 1092 aa26.55■■□□□ 1.84
HLA-C-201ENST00000376228 C10orf71Q711Q0 1435 aa26.55■■□□□ 1.84
HLA-C-201ENST00000376228 SMC5Q8IY18 1101 aa26.55■■□□□ 1.84
HLA-C-201ENST00000376228 POLRMTO00411 1230 aaKnown RBP26.54■■□□□ 1.84
HLA-C-201ENST00000376228 TM4SF1P30408 202 aa26.54■■□□□ 1.84
HLA-C-201ENST00000376228 NFIXQ14938 502 aa26.54■■□□□ 1.84
HLA-C-201ENST00000376228 DDX21Q9NR30 783 aaKnown RBP eCLIP26.54■■□□□ 1.84
HLA-C-201ENST00000376228 HYPKQ9NX55 129 aa26.54■■□□□ 1.84
HLA-C-201ENST00000376228 BICDL1Q6ZP65 573 aa26.53■■□□□ 1.84
HLA-C-201ENST00000376228 DZIP3Q86Y13 1208 aaKnown RBP26.53■■□□□ 1.84
HLA-C-201ENST00000376228 PHAXQ9H814 394 aaKnown RBP26.53■■□□□ 1.84
HLA-C-201ENST00000376228 F6X3S4 739 aa26.52■■□□□ 1.84
HLA-C-201ENST00000376228 NRXN2Q9P2S2 1712 aa26.52■■□□□ 1.84
HLA-C-201ENST00000376228 CAMTA2O94983 1202 aa26.5■■□□□ 1.83
HLA-C-201ENST00000376228 YBX3P16989 372 aaKnown RBP eCLIP26.5■■□□□ 1.83
HLA-C-201ENST00000376228 TBC1D9BQ66K14 1250 aa26.5■■□□□ 1.83
HLA-C-201ENST00000376228 RPAP2Q8IXW5 612 aaPredicted RBP26.49■■□□□ 1.83
HLA-C-201ENST00000376228 ATP10DQ9P241 1426 aa26.49■■□□□ 1.83
HLA-C-201ENST00000376228 PDIA6Q15084 440 aa26.49■■□□□ 1.83
HLA-C-201ENST00000376228 SLC4A10Q6U841 1118 aa26.49■■□□□ 1.83
HLA-C-201ENST00000376228 CHD4Q14839 1912 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms