RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TTC12Q9H892 705 aaPredicted RBP15.6■□□□□ 0.09
MSH5-204ENST00000375755 ATP10DQ9P241 1426 aa15.6■□□□□ 0.09
MSH5-204ENST00000375755 CRYBG1Q9Y4K1 1723 aa15.6■□□□□ 0.09
MSH5-204ENST00000375755 GTPBP4Q9BZE4 634 aaKnown RBP15.6■□□□□ 0.09
MSH5-204ENST00000375755 MEGF6O75095 1541 aa15.6■□□□□ 0.09
MSH5-204ENST00000375755 CAMTA1Q9Y6Y1 1673 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 HAP1P54257 671 aaPredicted RBP15.59■□□□□ 0.09
MSH5-204ENST00000375755 TMX3Q96JJ7 454 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 KDM3BQ7LBC6 1761 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 CEP85Q6P2H3 762 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 CHPF2Q9P2E5 772 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 AMOTQ4VCS5 1084 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 USP25Q9UHP3 1055 aa15.59■□□□□ 0.09
MSH5-204ENST00000375755 SMARCA5O60264 1052 aaPredicted RBP15.58■□□□□ 0.08
MSH5-204ENST00000375755 GADD45BO75293 160 aaPredicted RBP15.58■□□□□ 0.08
MSH5-204ENST00000375755 KIF3AQ9Y496 699 aa15.58■□□□□ 0.08
MSH5-204ENST00000375755 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.08
MSH5-204ENST00000375755 NEK4P51957 841 aa15.57■□□□□ 0.08
MSH5-204ENST00000375755 FOXD4L6Q3SYB3 417 aaPredicted RBP15.57■□□□□ 0.08
MSH5-204ENST00000375755 CASC1Q6TDU7 716 aa15.57■□□□□ 0.08
MSH5-204ENST00000375755 FOXD4L3Q6VB84 417 aaPredicted RBP15.57■□□□□ 0.08
MSH5-204ENST00000375755 GDPD2Q9HCC8 539 aa15.57■□□□□ 0.08
MSH5-204ENST00000375755 REC8O95072 547 aa15.57■□□□□ 0.08
MSH5-204ENST00000375755 PROSER3Q2NL68 480 aa15.57■□□□□ 0.08
MSH5-204ENST00000375755 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
MSH5-204ENST00000375755 SYAP1Q96A49 352 aaPredicted RBP15.57■□□□□ 0.08
MSH5-204ENST00000375755 AEBP2Q6ZN18 517 aaPredicted RBP15.57■□□□□ 0.08
MSH5-204ENST00000375755 SPTLC3Q9NUV7 552 aa15.56■□□□□ 0.08
MSH5-204ENST00000375755 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
MSH5-204ENST00000375755 ADCY5O95622 1261 aa15.56■□□□□ 0.08
MSH5-204ENST00000375755 ANKRD44Q8N8A2 993 aa15.56■□□□□ 0.08
MSH5-204ENST00000375755 ERC2O15083 957 aa15.55■□□□□ 0.08
MSH5-204ENST00000375755 KIF20AO95235 890 aa15.55■□□□□ 0.08
MSH5-204ENST00000375755 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
MSH5-204ENST00000375755 NFATC2IPQ8NCF5 419 aa15.55■□□□□ 0.08
MSH5-204ENST00000375755 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
MSH5-204ENST00000375755 CYP27B1O15528 508 aa15.54■□□□□ 0.08
MSH5-204ENST00000375755 CUL4AQ13619 759 aa15.54■□□□□ 0.08
MSH5-204ENST00000375755 BABAM1Q9NWV8 329 aa15.54■□□□□ 0.08
MSH5-204ENST00000375755 PHF14O94880 888 aa15.54■□□□□ 0.08
MSH5-204ENST00000375755 LETM1O95202 739 aaPredicted RBP15.54■□□□□ 0.08
MSH5-204ENST00000375755 TATP17735 454 aaPredicted RBP15.54■□□□□ 0.08
MSH5-204ENST00000375755 NOL8Q76FK4 1167 aaKnown RBP15.54■□□□□ 0.08
MSH5-204ENST00000375755 FAM184AQ8NB25 1140 aa15.54■□□□□ 0.08
MSH5-204ENST00000375755 SOS2Q07890 1332 aaPredicted RBP15.53■□□□□ 0.08
MSH5-204ENST00000375755 PHKG2P15735 406 aa15.53■□□□□ 0.08
MSH5-204ENST00000375755 USP48Q86UV5 1035 aa15.53■□□□□ 0.08
MSH5-204ENST00000375755 PRDM11Q9NQV5 511 aa15.53■□□□□ 0.08
MSH5-204ENST00000375755 NHSL1Q5SYE7 1610 aa15.53■□□□□ 0.08
MSH5-204ENST00000375755 SIPA1L3O60292 1781 aaPredicted RBP15.53■□□□□ 0.08
MSH5-204ENST00000375755 CCT4P50991 539 aaKnown RBP15.53■□□□□ 0.08
MSH5-204ENST00000375755 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
MSH5-204ENST00000375755 PNMA6EA0A0J9YXQ4 647 aa15.52■□□□□ 0.08
MSH5-204ENST00000375755 PIP4K2AP48426 406 aaPredicted RBP15.52■□□□□ 0.08
MSH5-204ENST00000375755 CACNA1FO60840 1977 aa15.52■□□□□ 0.08
MSH5-204ENST00000375755 PI4KAP2A4QPH2 592 aa15.52■□□□□ 0.08
MSH5-204ENST00000375755 GIGYF1O75420 1035 aaPredicted RBP15.52■□□□□ 0.08
MSH5-204ENST00000375755 PI4KAP1Q8N8J0 262 aa15.52■□□□□ 0.08
MSH5-204ENST00000375755 HCLS1P14317 486 aaPredicted RBP15.52■□□□□ 0.07
MSH5-204ENST00000375755 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.07
MSH5-204ENST00000375755 STRN4Q9NRL3 753 aa15.52■□□□□ 0.07
MSH5-204ENST00000375755 USP44Q9H0E7 712 aa15.51■□□□□ 0.07
MSH5-204ENST00000375755 U2AF2P26368 475 aaKnown RBP eCLIP15.51■□□□□ 0.078e-8■■■■□ 26.3
MSH5-204ENST00000375755 PALD1Q9ULE6 856 aa15.51■□□□□ 0.07
MSH5-204ENST00000375755 EXOC6BQ9Y2D4 811 aa15.51■□□□□ 0.07
MSH5-204ENST00000375755 LRRFIP2Q9Y608 721 aaKnown RBP15.51■□□□□ 0.07
MSH5-204ENST00000375755 RIOK3O14730 519 aaKnown RBP15.5■□□□□ 0.07
MSH5-204ENST00000375755 IGSF3O75054 1194 aa15.5■□□□□ 0.07
MSH5-204ENST00000375755 RPAP2Q8IXW5 612 aaPredicted RBP15.5■□□□□ 0.07
MSH5-204ENST00000375755 MCM2P49736 904 aa15.5■□□□□ 0.07
MSH5-204ENST00000375755 SCN11AQ9UI33 1791 aa15.5■□□□□ 0.07
MSH5-204ENST00000375755 TOM1L2Q6ZVM7 507 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 INTS4Q96HW7 963 aaKnown RBP15.49■□□□□ 0.07
MSH5-204ENST00000375755 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 GNAI2P04899 355 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 TPRNQ4KMQ1 711 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 ANKRD7Q92527 254 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 PYCARDQ9ULZ3 195 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 CPDO75976 1380 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 VGLL3A8MV65 326 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 NBPF7P0C2Y1 421 aaPredicted RBP15.49■□□□□ 0.07
MSH5-204ENST00000375755 AIMP1Q12904 312 aaKnown RBP15.49■□□□□ 0.07
MSH5-204ENST00000375755 CCDC183Q5T5S1 534 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 TSHZ3Q63HK5 1081 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 SPG7Q9UQ90 795 aa15.49■□□□□ 0.07
MSH5-204ENST00000375755 ADCY9O60503 1353 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 ZNF790Q6PG37 636 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 LARP1Q6PKG0 1096 aaKnown RBP15.48■□□□□ 0.07
MSH5-204ENST00000375755 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 KCNF1Q9H3M0 494 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 KDM4AO75164 1064 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 IFNL2Q8IZJ0 200 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 C5P01031 1676 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 ADAMTS7Q9UKP4 1686 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 HEG1Q9ULI3 1381 aa15.48■□□□□ 0.07
MSH5-204ENST00000375755 AP5Z1O43299 807 aa15.47■□□□□ 0.07
MSH5-204ENST00000375755 MYL6BP14649 208 aa15.47■□□□□ 0.07
MSH5-204ENST00000375755 ZNF496Q96IT1 587 aaPredicted RBP15.47■□□□□ 0.07
MSH5-204ENST00000375755 ROBO1Q9Y6N7 1651 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms