RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 CFHR5Q9BXR6 569 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 GRIP2Q9C0E4 1043 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 DIP2AQ14689 1571 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 KRBA1A5PL33 1030 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 H7C1W4 665 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 BAG6P46379 1132 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 MAP2K3P46734 347 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 SH3D19Q5HYK7 790 aa3.52□□□□□ -1.85
CCDC7-204ENST00000375025 KRTAP9-6A0A140TA67 174 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 LOC105371045A0A1W2PR82 267 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 THBS1P07996 1170 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 NR6A1Q15406 480 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 SKIV2LQ15477 1246 aaKnown RBP3.51□□□□□ -1.85
CCDC7-204ENST00000375025 PODNQ7Z5L7 613 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 LRP6O75581 1613 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 NLRP1Q9C000 1473 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.51□□□□□ -1.85
CCDC7-204ENST00000375025 RXRBP28702 533 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 ERVK-9P63128 1117 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 UBAP2LQ14157 1087 aaKnown RBP3.51□□□□□ -1.85
CCDC7-204ENST00000375025 FOXR1Q6PIV2 292 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 TSC1Q92574 1164 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 PUS7Q96PZ0 661 aaKnown RBP3.51□□□□□ -1.85
CCDC7-204ENST00000375025 PLCH2O75038 1416 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 NPHP4O75161 1426 aaPredicted RBP3.51□□□□□ -1.85
CCDC7-204ENST00000375025 ROBO1Q9Y6N7 1651 aa3.51□□□□□ -1.85
CCDC7-204ENST00000375025 PIP4K2BP78356 416 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 LBRQ14739 615 aaKnown RBP3.5□□□□□ -1.85
CCDC7-204ENST00000375025 Q8N3U1 123 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 KIF27Q86VH2 1401 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 PLXNC1O60486 1568 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 CAMSAP2Q08AD1 1489 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 ABCA6Q8N139 1617 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 YY1P25490 414 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 C1QTNF8P60827 252 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 NEUROD2Q15784 382 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 PNMA1Q8ND90 353 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 RALGAPBQ86X10 1494 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 SCAF11Q99590 1463 aaKnown RBP3.5□□□□□ -1.85
CCDC7-204ENST00000375025 NINLQ9Y2I6 1382 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 PHLPP1O60346 1717 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 COL8A1P27658 744 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 LINC00114Q6XXX2 140 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 PSMG3-AS1Q96PY0 264 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 NSFL1CQ9UNZ2 370 aaKnown RBP3.5□□□□□ -1.85
CCDC7-204ENST00000375025 HRH3Q9Y5N1 445 aa3.5□□□□□ -1.85
CCDC7-204ENST00000375025 MAP3K1Q13233 1512 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 ATP5J2-PTCD1G3V325 749 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 CLN3Q13286 438 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 NBPF10Q6P3W6 841 aaKnown RBP3.49□□□□□ -1.85
CCDC7-204ENST00000375025 NBPF15Q8N660 670 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 TRERF1Q96PN7 1200 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 NKTRP30414 1462 aaKnown RBP3.49□□□□□ -1.85
CCDC7-204ENST00000375025 BLMP54132 1417 aaPredicted RBP3.49□□□□□ -1.85
CCDC7-204ENST00000375025 TRAK2O60296 914 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 CEBPAP49715 358 aaPredicted RBP3.49□□□□□ -1.85
CCDC7-204ENST00000375025 PRELPP51888 382 aa3.49□□□□□ -1.85
CCDC7-204ENST00000375025 RBM6P78332 1123 aaKnown RBP3.49□□□□□ -1.85
CCDC7-204ENST00000375025 OXCT2Q9BYC2 517 aaPredicted RBP3.49□□□□□ -1.85
CCDC7-204ENST00000375025 ZMYM3Q14202 1370 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 CARMIL1Q5VZK9 1371 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 MROH1Q8NDA8 1641 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 DISP2A7MBM2 1401 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 RTEL1-TNFRSF6BF6WH68 1400 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 SHISA8B8ZZ34 492 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 RHOQP17081 205 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 ITGB7P26010 798 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 MCCD1P59942 119 aaPredicted RBP3.48□□□□□ -1.85
CCDC7-204ENST00000375025 SNRPNP63162 240 aaKnown RBP3.48□□□□□ -1.85
CCDC7-204ENST00000375025 C1orf229Q6ZS94 237 aaPredicted RBP3.48□□□□□ -1.85
CCDC7-204ENST00000375025 DZIP3Q86Y13 1208 aaKnown RBP3.48□□□□□ -1.85
CCDC7-204ENST00000375025 NEDD1Q8NHV4 660 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 GTPBP3Q969Y2 492 aaKnown RBP3.48□□□□□ -1.85
CCDC7-204ENST00000375025 NDFIP2Q9NV92 336 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 GDF2Q9UK05 429 aaPredicted RBP3.48□□□□□ -1.85
CCDC7-204ENST00000375025 MKL2Q9ULH7 1088 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 LAMC1P11047 1609 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 SAMD9Q5K651 1589 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 A0A1W2PRU2 124 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 GPR25O00155 361 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 F11P03951 625 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 MX2P20592 715 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 CTTNBP2Q8WZ74 1663 aa3.48□□□□□ -1.85
CCDC7-204ENST00000375025 SCAPERQ9BY12 1400 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 TIAM1Q13009 1591 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 KDM5AP29375 1690 aaKnown RBP3.47□□□□□ -1.85
CCDC7-204ENST00000375025 CC2D2BQ6DHV5 1058 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 PRICKLE2Q7Z3G6 844 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 EPS8L1Q8TE68 723 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 KLRG1Q96E93 195 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 TRIM34Q9BYJ4 488 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 NUCKS1Q9H1E3 243 aaKnown RBP3.47□□□□□ -1.85
CCDC7-204ENST00000375025 HMX1Q9NP08 348 aaPredicted RBP3.47□□□□□ -1.85
CCDC7-204ENST00000375025 SLCO4C1Q6ZQN7 724 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 GALNT6Q8NCL4 622 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 CYLDQ9NQC7 956 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 SLIT1O75093 1534 aa3.47□□□□□ -1.85
CCDC7-204ENST00000375025 CYP2U1Q7Z449 544 aa3.46□□□□□ -1.86
CCDC7-204ENST00000375025 POLR3EQ9NVU0 708 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms