RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 RIMBP2O15034 1052 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 KIF4BQ2VIQ3 1234 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 SRRTQ9BXP5 876 aaKnown RBP17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 KIAA1107Q9UPP5 1409 aa17.06■□□□□ 0.32
NOTCH4-201ENST00000375023 IDEP14735 1019 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 GOLGA6L7A0A1B0GV03 622 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 TXLNBQ8N3L3 684 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 ANKRD18BA2A2Z9 1011 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 UBXN4Q92575 508 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 ZSWIM4Q9H7M6 989 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 TOP1P11387 765 aaKnown RBP17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 CLIP2Q9UDT6 1046 aa17.05■□□□□ 0.32
NOTCH4-201ENST00000375023 IQCEQ6IPM2 695 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 LUZP1Q86V48 1076 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 GLRX3O76003 335 aaKnown RBP17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 TMCO5BA8MYB1 307 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 IFFO1Q0D2I5 559 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 PUS7Q96PZ0 661 aaKnown RBP17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 CASKIN1Q8WXD9 1431 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 CTNNA2P26232 953 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 CCDC194A0A1B0GVG4 234 aa17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 RPAP2Q8IXW5 612 aaPredicted RBP17.04■□□□□ 0.32
NOTCH4-201ENST00000375023 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 TMCO3Q6UWJ1 677 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 USP25Q9UHP3 1055 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 NESP48681 1621 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 CRACR2AQ9BSW2 395 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 SFPQP23246 707 aaKnown RBP eCLIP17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 GJB2P29033 226 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 PTPN14Q15678 1187 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 C16orf45Q96MC5 204 aaPredicted RBP17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 CCDC61Q9Y6R9 512 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 MTERF4Q7Z6M4 381 aaKnown RBP17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
NOTCH4-201ENST00000375023 MTIF2P46199 727 aaKnown RBP17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 RGS22Q8NE09 1264 aa17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 TMEM67Q5HYA8 995 aa17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 TSPY2A6NKD2 308 aa17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 ATP2B3Q16720 1220 aa17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 FERMT2Q96AC1 680 aa17.02■□□□□ 0.32
NOTCH4-201ENST00000375023 TICAM2Q86XR7 235 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 SYCP3Q8IZU3 236 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 RNF216Q9NWF9 866 aaPredicted RBP17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 WDR97A6NE52 1622 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 PRC1O43663 620 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 KIF20AO95235 890 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 NF2P35240 595 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 PICALMQ13492 652 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 TMC6Q7Z403 805 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 CATIPQ7Z7H3 387 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.31
NOTCH4-201ENST00000375023 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 PDCL2Q8N4E4 241 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 JAG2Q9Y219 1238 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 POGZQ7Z3K3 1410 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 KIF5CO60282 957 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 TMEM266Q2M3C6 531 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 NOP2P46087 812 aaKnown RBP17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 NAIPQ13075 1403 aa17.01■□□□□ 0.31
NOTCH4-201ENST00000375023 RNF187Q5TA31 235 aaPredicted RBP17■□□□□ 0.31
NOTCH4-201ENST00000375023 LDHAL6AQ6ZMR3 332 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 UBE3BQ7Z3V4 1068 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 DPH6Q7L8W6 267 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 NECAB1Q8N987 351 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 SLC52A1Q9NWF4 448 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 BICD1Q96G01 975 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 HLTFQ14527 1009 aaKnown RBP eCLIP17■□□□□ 0.31
NOTCH4-201ENST00000375023 CCDC40Q4G0X9 1142 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 CCDC150Q8NCX0 1101 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 ARAP1Q96P48 1450 aa17■□□□□ 0.31
NOTCH4-201ENST00000375023 TAF12Q16514 161 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 AMOTL2Q9Y2J4 779 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 USP16Q9Y5T5 823 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 ESPNB1AK53 854 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 LRSAM1Q6UWE0 723 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 ANO10Q9NW15 660 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 SPOUT1Q5T280 376 aaKnown RBP16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 CCDC91Q7Z6B0 441 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
NOTCH4-201ENST00000375023 CCDC183Q5T5S1 534 aa16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 AFMP43652 599 aa16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 PARP3Q9Y6F1 533 aa16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 CETN2P41208 172 aa16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 KAT14Q9H8E8 782 aa16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 ATAD2Q6PL18 1390 aa16.98■□□□□ 0.31
NOTCH4-201ENST00000375023 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
NOTCH4-201ENST00000375023 STX8Q9UNK0 236 aa16.97■□□□□ 0.31
NOTCH4-201ENST00000375023 SP4Q02446 784 aa16.97■□□□□ 0.31
NOTCH4-201ENST00000375023 ZNF830Q96NB3 372 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms