RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 FAM227BQ96M60 508 aa20.63■□□□□ 0.89
RXRB-201ENST00000374680 GADD45BO75293 160 aaPredicted RBP20.62■□□□□ 0.89
RXRB-201ENST00000374680 AK2P54819 239 aa20.62■□□□□ 0.89
RXRB-201ENST00000374680 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
RXRB-201ENST00000374680 ESPNB1AK53 854 aa20.62■□□□□ 0.89
RXRB-201ENST00000374680 GRM8O00222 908 aa20.62■□□□□ 0.89
RXRB-201ENST00000374680 EAF2Q96CJ1 260 aaPredicted RBP20.62■□□□□ 0.89
RXRB-201ENST00000374680 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
RXRB-201ENST00000374680 ZNF496Q96IT1 587 aaPredicted RBP20.62■□□□□ 0.89
RXRB-201ENST00000374680 CLEC17AQ6ZS10 378 aa20.61■□□□□ 0.89
RXRB-201ENST00000374680 ANP32BQ92688 251 aaKnown RBP20.61■□□□□ 0.89
RXRB-201ENST00000374680 LSG1Q9H089 658 aaKnown RBP20.61■□□□□ 0.89
RXRB-201ENST00000374680 LTN1O94822 1766 aa20.61■□□□□ 0.89
RXRB-201ENST00000374680 ZNF790Q6PG37 636 aa20.61■□□□□ 0.89
RXRB-201ENST00000374680 ECHDC1Q9NTX5 307 aa20.61■□□□□ 0.89
RXRB-201ENST00000374680 GLRX3O76003 335 aaKnown RBP20.6■□□□□ 0.89
RXRB-201ENST00000374680 SASH1O94885 1247 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 CHGBP05060 677 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 EPHA10Q5JZY3 1008 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 JAKMIP1Q96N16 626 aaKnown RBP20.6■□□□□ 0.89
RXRB-201ENST00000374680 LARGE1O95461 756 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 IGKV5-2P06315 115 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 HSP90AB4PQ58FF6 505 aa20.6■□□□□ 0.89
RXRB-201ENST00000374680 BRD1O95696 1058 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 HOXB7P09629 217 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 CCDC83Q8IWF9 413 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 NECAB1Q8N987 351 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 CHMP3Q9Y3E7 222 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 MARF1Q9Y4F3 1742 aaKnown RBP20.59■□□□□ 0.89
RXRB-201ENST00000374680 FAM208AQ9UK61 1670 aaKnown RBP20.59■□□□□ 0.89
RXRB-201ENST00000374680 MCM2P49736 904 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 ANAPC15P60006 121 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 HYPKQ9NX55 129 aa20.59■□□□□ 0.89
RXRB-201ENST00000374680 ATF3P18847 181 aa20.58■□□□□ 0.89
RXRB-201ENST00000374680 PDIA6Q15084 440 aa20.58■□□□□ 0.89
RXRB-201ENST00000374680 RAD50Q92878 1312 aa20.58■□□□□ 0.89
RXRB-201ENST00000374680 CUL4AQ13619 759 aa20.58■□□□□ 0.88
RXRB-201ENST00000374680 RUFY3Q7L099 469 aa20.58■□□□□ 0.88
RXRB-201ENST00000374680 LINS1Q8NG48 757 aa20.58■□□□□ 0.88
RXRB-201ENST00000374680 DDX21Q9NR30 783 aaKnown RBP eCLIP20.58■□□□□ 0.88
RXRB-201ENST00000374680 ERBB3P21860 1342 aa20.58■□□□□ 0.88
RXRB-201ENST00000374680 DDX58O95786 925 aaKnown RBP20.57■□□□□ 0.88
RXRB-201ENST00000374680 NFAT5O94916 1531 aa20.57■□□□□ 0.88
RXRB-201ENST00000374680 TATP17735 454 aaPredicted RBP20.57■□□□□ 0.88
RXRB-201ENST00000374680 ZNF330Q9Y3S2 320 aaPredicted RBP20.57■□□□□ 0.88
RXRB-201ENST00000374680 NEXNQ0ZGT2 675 aa20.56■□□□□ 0.88
RXRB-201ENST00000374680 UBE3BQ7Z3V4 1068 aa20.56■□□□□ 0.88
RXRB-201ENST00000374680 USP48Q86UV5 1035 aa20.56■□□□□ 0.88
RXRB-201ENST00000374680 FSD1Q9BTV5 496 aa20.56■□□□□ 0.88
RXRB-201ENST00000374680 ALDH1L1O75891 902 aa20.55■□□□□ 0.88
RXRB-201ENST00000374680 NMIQ13287 307 aaPredicted RBP20.55■□□□□ 0.88
RXRB-201ENST00000374680 TTC5Q8N0Z6 440 aa20.55■□□□□ 0.88
RXRB-201ENST00000374680 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
RXRB-201ENST00000374680 CNPY2Q9Y2B0 182 aa20.55■□□□□ 0.88
RXRB-201ENST00000374680 TAF6LQ9Y6J9 622 aa20.55■□□□□ 0.88
RXRB-201ENST00000374680 NPHP4O75161 1426 aaPredicted RBP20.55■□□□□ 0.88
RXRB-201ENST00000374680 GPATCH3Q96I76 525 aa20.55■□□□□ 0.88
RXRB-201ENST00000374680 FIBPO43427 364 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 SLC52A2Q9HAB3 445 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
RXRB-201ENST00000374680 HSPA2P54652 639 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 SMC3Q9UQE7 1217 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 LRRC37A3O60309 1634 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 AOX1Q06278 1338 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
RXRB-201ENST00000374680 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
RXRB-201ENST00000374680 PHKG2P15735 406 aa20.53■□□□□ 0.88
RXRB-201ENST00000374680 ANKRD13DQ6ZTN6 518 aa20.53■□□□□ 0.88
RXRB-201ENST00000374680 PDRG1Q9NUG6 133 aa20.53■□□□□ 0.88
RXRB-201ENST00000374680 STK3Q13188 491 aa20.53■□□□□ 0.88
RXRB-201ENST00000374680 A0A0D9SFI3 127 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 VPS37CA5D8V6 355 aaPredicted RBP20.52■□□□□ 0.88
RXRB-201ENST00000374680 NEURL1BA8MQ27 555 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 CYP27B1O15528 508 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 ZNF445P59923 1031 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 DNAJC2Q99543 621 aaKnown RBP20.52■□□□□ 0.88
RXRB-201ENST00000374680 LIMCH1Q9UPQ0 1083 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 RBM8AQ9Y5S9 174 aaKnown RBP20.52■□□□□ 0.88
RXRB-201ENST00000374680 SYT1P21579 422 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 CLCN1P35523 988 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 SLFNL1Q499Z3 407 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 LARP1Q6PKG0 1096 aaKnown RBP20.52■□□□□ 0.88
RXRB-201ENST00000374680 FERMT3Q86UX7 667 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 RUFY2Q8WXA3 655 aa20.52■□□□□ 0.88
RXRB-201ENST00000374680 GCKRQ14397 625 aa20.51■□□□□ 0.87
RXRB-201ENST00000374680 FAM173BQ6P4H8 233 aa20.51■□□□□ 0.87
RXRB-201ENST00000374680 INTS4Q96HW7 963 aaKnown RBP20.51■□□□□ 0.87
RXRB-201ENST00000374680 CABP4P57796 275 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 TTC14Q96N46 770 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 TTC41PQ6P2S7 1318 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 PXDNLA1KZ92 1463 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 PPFIA3O75145 1194 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 A0A087WZG4 1122 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 CCDC173Q0VFZ6 552 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 MTX1Q13505 466 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 EVI5LQ96CN4 794 aa20.5■□□□□ 0.87
RXRB-201ENST00000374680 GJB2P29033 226 aa20.49■□□□□ 0.87
RXRB-201ENST00000374680 TFCP2Q12800 502 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms