RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 TGFB2P61812 414 aa15.56■□□□□ 0.08
HDAC8-201ENST00000373554 TSR2Q969E8 191 aaKnown RBP15.56■□□□□ 0.08
HDAC8-201ENST00000373554 DDX21Q9NR30 783 aaKnown RBP eCLIP15.56■□□□□ 0.08
HDAC8-201ENST00000373554 MAP3K15Q6ZN16 1313 aa15.56■□□□□ 0.08
HDAC8-201ENST00000373554 AFDNP55196 1824 aaKnown RBP15.55■□□□□ 0.08
HDAC8-201ENST00000373554 ERVV-1B6SEH8 477 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 ANXA1P04083 346 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 PDIA6Q15084 440 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 PROSER3Q2NL68 480 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 TTLL7Q6ZT98 887 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 CHMP4AQ9BY43 222 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 ZBTB3Q9H5J0 574 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 CHPF2Q9P2E5 772 aa15.55■□□□□ 0.08
HDAC8-201ENST00000373554 DBF4Q9UBU7 674 aaPredicted RBP15.55■□□□□ 0.08
HDAC8-201ENST00000373554 KIAA1551Q9HCM1 1747 aa15.54■□□□□ 0.08
HDAC8-201ENST00000373554 ELL2O00472 640 aaPredicted RBP15.54■□□□□ 0.08
HDAC8-201ENST00000373554 CNBD1Q8NA66 436 aa15.54■□□□□ 0.08
HDAC8-201ENST00000373554 NIP7Q9Y221 180 aaKnown RBP eCLIP15.54■□□□□ 0.08
HDAC8-201ENST00000373554 ATP10DQ9P241 1426 aa15.53■□□□□ 0.08
HDAC8-201ENST00000373554 FANCIQ9NVI1 1328 aa15.53■□□□□ 0.08
HDAC8-201ENST00000373554 HLFQ16534 295 aa15.53■□□□□ 0.08
HDAC8-201ENST00000373554 LRP10Q7Z4F1 713 aa15.53■□□□□ 0.08
HDAC8-201ENST00000373554 C8orf58Q8NAV2 365 aa15.53■□□□□ 0.08
HDAC8-201ENST00000373554 N4BP2Q86UW6 1770 aaPredicted RBP15.52■□□□□ 0.08
HDAC8-201ENST00000373554 A0A0G2JLW4 131 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 DPEP1P16444 411 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 ST5P78524 1137 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 PRR5LQ6MZQ0 368 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
HDAC8-201ENST00000373554 MIER1Q8N108 512 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 HYPKQ9NX55 129 aa15.52■□□□□ 0.08
HDAC8-201ENST00000373554 GRIN3BO60391 1043 aa15.51■□□□□ 0.07
HDAC8-201ENST00000373554 YBX3P16989 372 aaKnown RBP eCLIP15.51■□□□□ 0.07
HDAC8-201ENST00000373554 GOLGA2Q08379 1002 aa15.51■□□□□ 0.07
HDAC8-201ENST00000373554 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
HDAC8-201ENST00000373554 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
HDAC8-201ENST00000373554 GIGYF2Q6Y7W6 1299 aaKnown RBP15.51■□□□□ 0.07
HDAC8-201ENST00000373554 COPS6Q7L5N1 327 aa15.51■□□□□ 0.07
HDAC8-201ENST00000373554 MYH16Q9H6N6 1097 aa15.51■□□□□ 0.07
HDAC8-201ENST00000373554 WWC3Q9ULE0 1092 aa15.51■□□□□ 0.07
HDAC8-201ENST00000373554 NUP98P52948 1817 aa15.5■□□□□ 0.07
HDAC8-201ENST00000373554 CCDC30Q5VVM6 783 aa15.5■□□□□ 0.07
HDAC8-201ENST00000373554 TPTE2Q6XPS3 522 aa15.5■□□□□ 0.07
HDAC8-201ENST00000373554 TSPYL6Q8N831 410 aa15.5■□□□□ 0.07
HDAC8-201ENST00000373554 GPTP24298 496 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 CHRNA5P30532 468 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 HSP90AB3PQ58FF7 597 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 NYXQ9GZU5 481 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 PIM2Q9P1W9 311 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 PDZRN3Q9UPQ7 1066 aa15.49■□□□□ 0.07
HDAC8-201ENST00000373554 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
HDAC8-201ENST00000373554 FAM177BA6PVY3 158 aa15.48■□□□□ 0.07
HDAC8-201ENST00000373554 GTF2E1P29083 439 aaPredicted RBP15.48■□□□□ 0.07
HDAC8-201ENST00000373554 PDE6BP35913 854 aa15.48■□□□□ 0.07
HDAC8-201ENST00000373554 C2CD5Q86YS7 1000 aa15.48■□□□□ 0.07
HDAC8-201ENST00000373554 CCDC24Q8N4L8 307 aa15.48■□□□□ 0.07
HDAC8-201ENST00000373554 BCS1LQ9Y276 419 aa15.48■□□□□ 0.07
HDAC8-201ENST00000373554 BRCA1P38398 1863 aaKnown RBP15.48■□□□□ 0.07
HDAC8-201ENST00000373554 IBTKQ9P2D0 1353 aaPredicted RBP15.48■□□□□ 0.07
HDAC8-201ENST00000373554 DLEC1Q9Y238 1755 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 H0YIN7 160 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 C1QTNF8P60827 252 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 PARP10Q53GL7 1025 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 ZNF34Q8IZ26 560 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 ANKRD31Q8N7Z5 1873 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 PLBD2Q8NHP8 589 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
HDAC8-201ENST00000373554 ANKRD36CQ5JPF3 1778 aa15.47■□□□□ 0.07
HDAC8-201ENST00000373554 UBN2Q6ZU65 1347 aa15.46■□□□□ 0.07
HDAC8-201ENST00000373554 KCNA3P22001 575 aa15.46■□□□□ 0.07
HDAC8-201ENST00000373554 EXOSC9Q06265 439 aaKnown RBP15.46■□□□□ 0.07
HDAC8-201ENST00000373554 DALRD3Q5D0E6 543 aaKnown RBP15.46■□□□□ 0.07
HDAC8-201ENST00000373554 ANKRD13DQ6ZTN6 518 aa15.46■□□□□ 0.07
HDAC8-201ENST00000373554 DDX58O95786 925 aaKnown RBP15.45■□□□□ 0.06
HDAC8-201ENST00000373554 PPP1R42Q7Z4L9 355 aa15.45■□□□□ 0.06
HDAC8-201ENST00000373554 PHAXQ9H814 394 aaKnown RBP15.45■□□□□ 0.06
HDAC8-201ENST00000373554 COL11A2P13942 1736 aaPredicted RBP15.45■□□□□ 0.06
HDAC8-201ENST00000373554 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
HDAC8-201ENST00000373554 E9PSI1 815 aa15.44■□□□□ 0.06
HDAC8-201ENST00000373554 TCIRG1Q13488 830 aa15.44■□□□□ 0.06
HDAC8-201ENST00000373554 SUSD4Q5VX71 490 aa15.44■□□□□ 0.06
HDAC8-201ENST00000373554 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
HDAC8-201ENST00000373554 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
HDAC8-201ENST00000373554 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 TCERG1O14776 1098 aaKnown RBP15.43■□□□□ 0.06
HDAC8-201ENST00000373554 NTSR2O95665 410 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 NUTM1Q86Y26 1132 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 ZNF622Q969S3 477 aaKnown RBP eCLIP15.43■□□□□ 0.06
HDAC8-201ENST00000373554 UTP14AQ9BVJ6 771 aaKnown RBP15.43■□□□□ 0.06
HDAC8-201ENST00000373554 ABCC12Q96J65 1359 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 CHD4Q14839 1912 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 ARFGEF1Q9Y6D6 1849 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 RIC1Q4ADV7 1423 aa15.43■□□□□ 0.06
HDAC8-201ENST00000373554 VAMP4O75379 141 aa15.42■□□□□ 0.06
HDAC8-201ENST00000373554 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
HDAC8-201ENST00000373554 ERFEQ4G0M1 354 aa15.42■□□□□ 0.06
HDAC8-201ENST00000373554 NLRP10Q86W26 655 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms